Overview | |
---|---|
UHGV ID | UHGV-0205212 |
vOTU ID | vOTU-060778 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SRS052697_a1_ct235404_vs1@Siphoviridae__sp._ctJeo1 |
Associated BioSample | SAMN00072706 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 63.16 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 21 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9559 |
Virus hallmark genes (geNomad) | 11 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 32.61 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 52,000 |
GC content | 49.82% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 69 |
CDS density | 87% |
Average CDS length (bps) | 654.57 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |