Overview | |
---|---|
UHGV ID | UHGV-0205866 |
vOTU ID | vOTU-123315 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SRS100021_a1_ct10640_vs1@Siphoviridae__sp._ctHYV1 |
Associated BioSample | SAMN00096542 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 42.57 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 5 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9782 |
Virus hallmark genes (geNomad) | 2 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 11.28 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 17,350 |
GC content | 55.77% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 33 |
CDS density | 91% |
Average CDS length (bps) | 476.64 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |