UHGV-0206436 (vOTU-135521)

Viral Genome: UHGV-0206436

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0206436
vOTU ID	vOTU-135521
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781773_a1_ct347597_vs1@Siphoviridae__sp._ctlas1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.91 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.983
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.07
Jumbo phage	No

Genome content
Genome length (bp)	30,630
GC content	41.41%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	94%
Average CDS length (bps)	602.00
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0206436_2	phrog_17690	137.2	4.80001e-41	N/A	unknown function
eggNOG-mapper	UHGV-0206436_2	476272.RUMHYD_03925	193.0	0	N/A	N/A
UniRef90	UHGV-0206436_4	UniRef90_A0A373P4I4	63.5	0.0000000000213	Winged helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0206436_4	PF12840	N/A	N/A	Helix-turn-helix domain	HTH_20
structural_annotation	UHGV-0206436_4	PF01726,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_5	phrog_424	118.4	6.5e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0206436_5	UniRef90_A0A373DE70	423.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0206436_5	742733.HMPREF9469_01838	407.0	0	sulfate reduction	N/A
COG	UHGV-0206436_5	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0206436_5	PF01507,MF_00063,TIGR02055,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206436_7	NF041197	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206436_8	397290.C810_01505	139.0	1.13001e-41	N/A	N/A
PHROG	UHGV-0206436_10	phrog_419	75.7	9.4e-22	N/A	unknown function
UniRef90	UHGV-0206436_10	UniRef90_A0A6G6XL02	74.7	6.58e-16	MazG-like nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-0206436_10	1009370.ALO_12376	98.2	8.56e-25	N/A	N/A
UniRef90	UHGV-0206436_11	UniRef90_A0A395XB56	115.0	1.35e-30	N/A	N/A
PHROG	UHGV-0206436_12	phrog_20593	59.6	4.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0206436_15	1235799.C818_02666	66.2	0.0000000000935	N/A	N/A
structural_annotation	UHGV-0206436_15	PF11302	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206436_16	PF17630	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_17	phrog_2245	85.4	6.1e-25	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0206436_17	UniRef90_A0A373NRP8	144.0	2.20004e-42	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0206436_17	326426.Bbr_0313	68.9	0.00000000000287	N/A	N/A
Pfam	UHGV-0206436_17	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-0206436_17	PF12643,NF001613,COG0140	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206436_20	411459.RUMOBE_01385	50.4	0.00000105	N/A	N/A
AcrCatalog	UHGV-0206436_20	cluster_11670	79.0	3.04e-22	NA	N/A
PHROG	UHGV-0206436_21	phrog_606	92.7	4.1e-27	terminase small subunit	head and packaging
UniRef90	UHGV-0206436_21	UniRef90_UPI001F487344	170.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0206436_21	397290.C810_05185	177.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0206436_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0206436_21	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0206436_22	K06909	330.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0206436_22	phrog_3717	161.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0206436_22	UniRef90_A0A395X9V4	813.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0206436_22	397291.C804_01612	409.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0206436_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0206436_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0206436_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0206436_22	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_24	phrog_533	289.6	0	portal protein	head and packaging
UniRef90	UHGV-0206436_24	UniRef90_A0A1C6CDM8	702.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0206436_24	33035.JPJF01000106_gene3135	540.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0206436_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_25	phrog_581	269.5	0	minor head protein	head and packaging
UniRef90	UHGV-0206436_25	UniRef90_A0A395X791	769.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0206436_25	476272.RUMHYD_01761	424.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0206436_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0206436_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206436_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_26	phrog_3754	115.8	2.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-0206436_26	476272.RUMHYD_01764	182.0	0	N/A	N/A
UniRef90	UHGV-0206436_27	UniRef90_A0A395X7A4	170.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0206436_27	476272.RUMHYD_01766	125.0	3.21e-36	N/A	N/A
PHROG	UHGV-0206436_28	phrog_21718	130.1	9.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-0206436_28	397290.C810_05210	122.0	4.88e-33	N/A	N/A
PHROG	UHGV-0206436_29	phrog_22984	95.1	4.1e-28	N/A	unknown function
PHROG	UHGV-0206436_30	phrog_16490	190.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0206436_30	397290.C810_01328	141.0	1.04e-37	N/A	N/A
PHROG	UHGV-0206436_31	phrog_20016	205.0	0	N/A	unknown function
UniRef90	UHGV-0206436_31	UniRef90_A0A285PT46	168.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0206436_31	397290.C810_05214	186.0	0	N/A	N/A
structural_annotation	UHGV-0206436_31	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_32	phrog_28802	186.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0206436_32	476272.RUMHYD_01772	151.0	5.32493e-44	N/A	N/A
PHROG	UHGV-0206436_33	phrog_194	66.8	4.2e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0206436_33	UniRef90_UPI001D14C9C8	192.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0206436_33	476272.RUMHYD_01775	195.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0206436_33	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0206436_34	phrog_544	161.0	0	major head protein	head and packaging
UniRef90	UHGV-0206436_34	UniRef90_A0A395X7A1	664.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0206436_34	1232453.BAIF02000011_gene3359	384.0	0	N/A	N/A
Pfam	UHGV-0206436_34	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0206436_34	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_35	phrog_541	96.4	8.8e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0206436_35	476272.RUMHYD_01778	114.0	3.22e-30	N/A	N/A
PHROG	UHGV-0206436_36	phrog_918	128.4	1.6e-38	N/A	unknown function
UniRef90	UHGV-0206436_36	UniRef90_UPI0004D82A84	161.0	0	N/A	N/A
eggNOG-mapper	UHGV-0206436_36	357809.Cphy_2966	153.0	0	N/A	N/A
Pfam	UHGV-0206436_36	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0206436_36	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_37	phrog_1129	77.3	1.3e-22	holin	lysis
UniRef90	UHGV-0206436_37	UniRef90_A0A395X7B2	173.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0206436_37	411461.DORFOR_00721	113.0	7.19e-32	N/A	N/A
Pfam	UHGV-0206436_37	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0206436_37	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_38	phrog_3366	101.7	6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0206436_38	476272.RUMHYD_01779	157.0	0	N/A	N/A
structural_annotation	UHGV-0206436_38	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_39	phrog_556	53.9	0.0000000000000013	minor head protein	head and packaging
UniRef90	UHGV-0206436_39	UniRef90_UPI000E4989EB	317.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0206436_39	476272.RUMHYD_01780	149.0	5.74532e-44	N/A	N/A
Pfam	UHGV-0206436_39	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0206436_39	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_40	phrog_3266	90.6	1.3e-26	tail completion	connector
eggNOG-mapper	UHGV-0206436_40	476272.RUMHYD_01781	149.0	8.96831e-44	N/A	N/A
structural_annotation	UHGV-0206436_40	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_41	phrog_3099	134.9	4.7e-40	N/A	unknown function
eggNOG-mapper	UHGV-0206436_41	411902.CLOBOL_00129	173.0	0	N/A	N/A
structural_annotation	UHGV-0206436_41	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_42	phrog_11299	71.4	1.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0206436_42	33035.JPJF01000106_gene3125	60.8	0.000000000817	N/A	N/A
structural_annotation	UHGV-0206436_42	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_43	phrog_706	132.8	2.3e-39	N/A	unknown function
UniRef90	UHGV-0206436_43	UniRef90_UPI001BAD00AD	208.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0206436_43	411459.RUMOBE_01383	343.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0206436_43	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0206436_43	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0206436_44	phrog_1535	613.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0206436_44	UniRef90_A0A1C5PIN9	604.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0206436_44	476272.RUMHYD_01785	493.0	0	phage tail tape measure protein	N/A
COG	UHGV-0206436_44	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206436_44	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206436_45	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0206436_46	K06237	57.0	5.6e-17	COL4A; collagen type IV alpha	N/A
PHROG	UHGV-0206436_46	phrog_6616	476.3	0	tail protein	tail
UniRef90	UHGV-0206436_46	UniRef90_A0A2V2D052	2406.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0206436_46	33035.JPJF01000043_gene1002	254.0	0	N/A	N/A
Pfam	UHGV-0206436_46	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0206436_46	PF05113,PF01835,PF03921,NF033848,COG3500	N/A	N/A	N/A	N/A