UHGV-0206684 (vOTU-101727)

Viral Genome: UHGV-0206684

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0206684
vOTU ID	vOTU-101727
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN10080926_a1_ct5634_vs1@linear@Siphoviridae__sp._ctbGE1
Associated BioSample	SAMN10080926
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	52.1 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9831
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.7
Jumbo phage	No

Genome content
Genome length (bp)	23,465
GC content	41.97%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	94%
Average CDS length (bps)	566.39
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0206684_1	428125.CLOLEP_02759	129.0	2.24e-28	pathogenesis	N/A
Pfam	UHGV-0206684_1	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
COG	UHGV-0206684_1	COG0683	N/A	N/A	ABC-type branched-chain amino acid transport system, periplasmic component	N/A
structural_annotation	UHGV-0206684_1	PF13306,PF07523,NF040978	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_2	phrog_1194	65.9	5.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0206684_2	483218.BACPEC_01144	115.0	3.78e-31	N/A	N/A
Pfam	UHGV-0206684_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0206684_2	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_3	phrog_1535	313.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0206684_3	UniRef90_A0A173R880	637.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0206684_3	476272.RUMHYD_01785	679.0	0	phage tail tape measure protein	N/A
COG	UHGV-0206684_3	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206684_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_4	phrog_706	126.4	2.3e-37	N/A	unknown function
UniRef90	UHGV-0206684_4	UniRef90_UPI001BAD00AD	194.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0206684_4	411459.RUMOBE_01383	318.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0206684_4	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0206684_4	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_5	phrog_11299	65.6	9.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0206684_5	411459.RUMOBE_01382	58.5	0.00000000586	N/A	N/A
structural_annotation	UHGV-0206684_5	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_6	phrog_3099	129.6	2.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-0206684_6	411902.CLOBOL_00129	164.0	0	N/A	N/A
structural_annotation	UHGV-0206684_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_7	phrog_3266	95.3	4.9e-28	tail completion	connector
eggNOG-mapper	UHGV-0206684_7	476272.RUMHYD_01781	153.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-0206684_7	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_8	phrog_556	55.9	3.2e-16	minor head protein	head and packaging
UniRef90	UHGV-0206684_8	UniRef90_UPI000E4989EB	324.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0206684_8	476272.RUMHYD_01780	153.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0206684_8	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0206684_8	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_9	phrog_3366	99.1	4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0206684_9	476272.RUMHYD_01779	150.0	1.4013e-44	N/A	N/A
structural_annotation	UHGV-0206684_9	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_10	phrog_1129	77.4	1.3e-22	holin	lysis
UniRef90	UHGV-0206684_10	UniRef90_A0A395X7B2	172.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0206684_10	411461.DORFOR_00721	114.0	5.06e-32	N/A	N/A
Pfam	UHGV-0206684_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0206684_10	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206684_11	588581.Cpap_1521	89.0	9.11e-22	N/A	N/A
PHROG	UHGV-0206684_12	phrog_541	94.1	6.8e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0206684_12	476272.RUMHYD_01778	108.0	8e-28	N/A	N/A
PHROG	UHGV-0206684_13	phrog_544	163.8	0	major head protein	head and packaging
UniRef90	UHGV-0206684_13	UniRef90_A0A395X7A1	728.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0206684_13	1232453.BAIF02000011_gene3359	382.0	0	N/A	N/A
Pfam	UHGV-0206684_13	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0206684_13	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_14	phrog_194	67.8	2.2e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0206684_14	UniRef90_UPI001D14C9C8	183.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0206684_14	476272.RUMHYD_01775	202.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0206684_14	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0206684_14	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_15	phrog_28802	224.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0206684_15	476272.RUMHYD_01772	195.0	0	N/A	N/A
PHROG	UHGV-0206684_16	phrog_20016	203.7	0	N/A	unknown function
UniRef90	UHGV-0206684_16	UniRef90_A0A285PT46	167.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0206684_16	397290.C810_05214	187.0	0	N/A	N/A
structural_annotation	UHGV-0206684_16	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_17	phrog_16490	193.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0206684_17	397290.C810_01328	189.0	0	N/A	N/A
PHROG	UHGV-0206684_18	phrog_22984	91.3	6.7e-27	N/A	unknown function
PHROG	UHGV-0206684_19	phrog_21718	132.9	1.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0206684_19	476272.RUMHYD_01768	130.0	1.6e-36	N/A	N/A
UniRef90	UHGV-0206684_20	UniRef90_A0A395X7A4	182.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0206684_20	476272.RUMHYD_01766	120.0	2.16e-34	N/A	N/A
PHROG	UHGV-0206684_21	phrog_3754	114.1	9.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0206684_21	476272.RUMHYD_01764	180.0	0	N/A	N/A
PHROG	UHGV-0206684_22	phrog_581	272.9	0	minor head protein	head and packaging
UniRef90	UHGV-0206684_22	UniRef90_A0A395X791	764.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0206684_22	33035.JPJF01000106_gene3134	427.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0206684_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0206684_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206684_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_23	phrog_533	280.7	0	portal protein	head and packaging
UniRef90	UHGV-0206684_23	UniRef90_A0A1C6CDM8	702.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0206684_23	33035.JPJF01000106_gene3135	535.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0206684_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0206684_25	K06909	342.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0206684_25	phrog_3717	165.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0206684_25	UniRef90_A0A395X9V4	811.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0206684_25	33035.JPJF01000106_gene3136	416.0	0	Terminase small subunit	N/A
Pfam	UHGV-0206684_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0206684_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0206684_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0206684_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0206684_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0206684_26	K07474	99.5	6.7e-29	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0206684_26	phrog_51	109.9	2.2e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0206684_26	UniRef90_A0A416ZL36	154.0	1.4013e-45	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0206684_26	476272.RUMHYD_01754	145.0	4.34403e-43	Terminase small subunit	N/A
Pfam	UHGV-0206684_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0206684_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0206684_26	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_28	phrog_33130	104.6	3.7e-31	N/A	unknown function
structural_annotation	UHGV-0206684_28	PF10922,MF_00839	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206684_31	PF17630	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206684_35	PF06107,COG4481	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_37	phrog_8684	102.0	5.2e-30	N/A	unknown function
UniRef90	UHGV-0206684_37	UniRef90_UPI000E48CB3D	215.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0206684_37	476272.RUMHYD_03337	87.0	8.81e-20	N/A	N/A
Pfam	UHGV-0206684_37	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0206684_37	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0206684_38	phrog_20593	47.8	0.00000000000022	N/A	unknown function
PHROG	UHGV-0206684_39	phrog_20593	49.5	0.000000000000033	N/A	unknown function