UHGV-0206796 (vOTU-094478)

Viral Genome: UHGV-0206796

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0206796
vOTU ID	vOTU-094478
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN11252259_a1_ct113286_vs1@Unclassified_virus__sp._ct8t21
Associated BioSample	SAMN11252259
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.48 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9779
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - plasmid or chromosomal
viralVerify score	1.27
Jumbo phage	No

Genome content
Genome length (bp)	33,927
GC content	52.19%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	87%
Average CDS length (bps)	626.43
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0206796_1	UniRef90_A0A810QFN4	488.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0206796_1	693746.OBV_01590	346.0	0	N/A	N/A
Pfam	UHGV-0206796_1	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
eggNOG-mapper	UHGV-0206796_2	693746.OBV_01600	59.7	0.000000482	N/A	N/A
PHROG	UHGV-0206796_3	phrog_20388	89.3	4.1e-26	endolysin	lysis
UniRef90	UHGV-0206796_3	UniRef90_UPI00189D4A1D	99.4	1.71e-21	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0206796_3	1121296.JONJ01000026_gene2168	105.0	3.63e-23	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0206796_3	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0206796_3	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0206796_3	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0206796_3	PF18013,PF01471,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_4	phrog_18593	99.0	4.8e-29	N/A	unknown function
UniRef90	UHGV-0206796_4	UniRef90_A0A1C6AVU9	143.0	1.59005e-41	Carbohydrate binding domain	N/A
eggNOG-mapper	UHGV-0206796_4	411460.RUMTOR_02099	122.0	8.98e-33	N/A	N/A
Pfam	UHGV-0206796_4	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0206796_4	PF14600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206796_7	PF21253,PF07210,NF038128,TIGR03000,COG2512	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206796_8	PF07210,TIGR03000	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_9	phrog_892	65.0	1.5e-29	tail fiber protein	tail
PHROG	UHGV-0206796_10	phrog_5107	40.3	0.000000000024	amidase	lysis
UniRef90	UHGV-0206796_10	UniRef90_A0A4D7ASB8	515.0	0	N/A	N/A
eggNOG-mapper	UHGV-0206796_10	1519439.JPJG01000011_gene54	521.0	0	N/A	N/A
structural_annotation	UHGV-0206796_10	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206796_11	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206796_12	1519439.JPJG01000011_gene57	122.0	1.03e-33	N/A	N/A
structural_annotation	UHGV-0206796_12	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_13	phrog_1129	62.6	4.7e-18	holin	lysis
UniRef90	UHGV-0206796_13	UniRef90_A0A0D8J2M2	119.0	2.32e-33	Enolase	N/A
eggNOG-mapper	UHGV-0206796_13	665956.HMPREF1032_03272	116.0	6.26e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0206796_13	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0206796_13	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_14	phrog_1863	66.8	1.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0206796_14	748224.HMPREF9436_00408	95.5	5.03e-25	N/A	N/A
PHROG	UHGV-0206796_15	phrog_422	121.6	6.1e-36	major head protein	head and packaging
UniRef90	UHGV-0206796_15	UniRef90_A0A8J6JH37	293.0	0	Chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0206796_15	693746.OBV_01700	218.0	0	N/A	N/A
Pfam	UHGV-0206796_15	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0206796_15	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_17	phrog_156	90.6	1e-27	portal protein	head and packaging
eggNOG-mapper	UHGV-0206796_17	693746.OBV_01670	536.0	0	N/A	N/A
structural_annotation	UHGV-0206796_17	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_19	phrog_5653	40.7	0.0000000000017	terminase large subunit	head and packaging
UniRef90	UHGV-0206796_19	UniRef90_A0A1Y3RJJ5	240.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0206796_19	693746.OBV_01690	215.0	0	phage Terminase large subunit	N/A
COG	UHGV-0206796_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0206796_19	PF20441,MF_04148,TIGR01547,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_20	phrog_374	157.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206796_20	UniRef90_A0A6L8SWJ4	141.0	5.15e-39	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0206796_20	742767.HMPREF9456_02044	150.0	2.11596e-43	N/A	N/A
PHROG	UHGV-0206796_21	phrog_979	50.4	0.000000000000026	terminase large subunit	head and packaging
UniRef90	UHGV-0206796_21	UniRef90_K1TA53	123.0	6.26e-33	Phage terminase, large subunit, PBSX (Fragment)	N/A
eggNOG-mapper	UHGV-0206796_21	693746.OBV_01690	129.0	6.52e-34	phage Terminase large subunit	N/A
COG	UHGV-0206796_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-0206796_23	phrog_10415	74.8	5.9e-22	N/A	unknown function
UniRef90	UHGV-0206796_23	UniRef90_UPI00068FC51E	238.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0206796_23	1519439.JPJG01000053_gene1369	238.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0206796_23	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-0206796_23	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0206796_25	PF17917	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206796_29	UniRef90_A0A7M1RTM1	74.3	0.000000000000198	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0206796_29	1408437.JNJN01000043_gene801	73.2	0.0000000000000926	N/A	N/A
KOfam	UHGV-0206796_30	K14059	110.2	3.3e-32	int; integrase	N/A
PHROG	UHGV-0206796_30	phrog_1	125.9	4.2e-37	integrase	integration and excision
UniRef90	UHGV-0206796_30	UniRef90_A0A3D2G173	328.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0206796_30	585506.HMPREF0877_0281	62.4	0.0000000497	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0206796_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0206796_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0206796_30	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206796_31	UniRef90_A0A415YMQ8	89.4	7.06e-21	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0206796_31	585202.SMSK321_0674	68.9	0.0000000000000775	N/A	N/A
Pfam	UHGV-0206796_31	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
KOfam	UHGV-0206796_32	K22300	43.3	0.0000000000072	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0206796_32	phrog_8	67.6	2.5e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0206796_32	UniRef90_A0A8J6PFI8	83.6	1.51e-18	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0206796_32	1378168.N510_01712	79.7	1.25e-16	N/A	N/A
Pfam	UHGV-0206796_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0206796_32	NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0206796_37	K22300	53.5	0.0000000000000057	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0206796_37	phrog_8	45.1	0.0000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0206796_37	UniRef90_A0A1S2GHY7	54.3	0.0000000499	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0206796_37	1118060.CAGZ01000012_gene16	51.6	0.000000496	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0206796_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0206796_37	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
Pfam	UHGV-0206796_38	PF00325	N/A	N/A	Bacterial regulatory proteins, crp family	Crp
structural_annotation	UHGV-0206796_38	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_43	phrog_298	81.8	2.4e-24	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206796_43	UniRef90_A0A1C5T0L2	89.4	1.5e-18	PD-(D/E)XK nuclease superfamily	N/A
eggNOG-mapper	UHGV-0206796_43	1218075.BAYA01000003_gene606	78.2	0.00000000000000374	N/A	N/A
structural_annotation	UHGV-0206796_43	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0206796_45	phrog_561	127.7	2.8e-38	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206796_45	UniRef90_A0A174RC35	228.0	0	RecT family	N/A
eggNOG-mapper	UHGV-0206796_45	33035.JPJF01000071_gene4462	155.0	7.00649e-45	N/A	N/A
Pfam	UHGV-0206796_45	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0206796_45	PF03837,TIGR01913	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206796_47	PF08962	N/A	N/A	N/A	N/A