Overview | |
---|---|
UHGV ID | UHGV-0206972 |
vOTU ID | vOTU-000010 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SRS078242_a1_ct22959_vs1@Herelleviridae__sp._ctKUn1 |
Associated BioSample | SAMN00088409 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 21.75 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 3 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9817 |
Virus hallmark genes (geNomad) | 0 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 16.56 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 17,150 |
GC content | 38.25% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 22 |
CDS density | 94% |
Average CDS length (bps) | 729.00 |
Total tRNA genes | 1 |
Suppressor tRNA genes | 0 |