UHGV-0207166 (vOTU-068350)

Viral Genome: UHGV-0207166

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0207166
vOTU ID	vOTU-068350
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781768_a1_ct84795_vs1@Myoviridae__sp._ctfr11
Associated BioSample	SAMN09781768
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.42 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	16
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9767
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.46
Jumbo phage	No

Genome content
Genome length (bp)	36,169
GC content	42.56%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	56
CDS density	92%
Average CDS length (bps)	596.57
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0207166_1	K00014	136.7	2.4e-40	aroE; shikimate dehydrogenase [EC:1.1.1.25]	N/A
UniRef90	UHGV-0207166_1	UniRef90_A0A352SJ49	335.0	0	Shikimate_dh_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0207166_1	97138.C820_02656	191.0	0	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)	N/A
COG	UHGV-0207166_1	COG0169	N/A	N/A	Shikimate 5-dehydrogenase	N/A
KOfam	UHGV-0207166_2	K13993	111.0	1.4e-32	HSP20; HSP20 family protein	N/A
PHROG	UHGV-0207166_2	phrog_432	73.5	2.8e-21	Hsp20 heat shock protein	other
UniRef90	UHGV-0207166_2	UniRef90_R7C5N3	306.0	0	SHSP domain-containing protein	N/A
eggNOG-mapper	UHGV-0207166_2	592026.GCWU0000282_001358	238.0	0	Belongs to the small heat shock protein (HSP20) family	N/A
Pfam	UHGV-0207166_2	PF00011	N/A	N/A	Hsp20/alpha crystallin family	HSP20
COG	UHGV-0207166_2	COG0071	N/A	N/A	Small heat shock protein IbpA, HSP20 family	N/A
KOfam	UHGV-0207166_3	K14059	217.9	0	int; integrase	N/A
PHROG	UHGV-0207166_3	phrog_1	210.7	0	integrase	integration and excision
UniRef90	UHGV-0207166_3	UniRef90_A0A1I0CRT8	362.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0207166_3	411459.RUMOBE_02516	358.0	0	N/A	N/A
Pfam	UHGV-0207166_3	PF02920	N/A	N/A	DNA binding domain of tn916 integrase	Integrase_DNA
Pfam	UHGV-0207166_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0207166_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0207166_3	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_4	phrog_16129	69.2	4e-20	excisionase	integration and excision
UniRef90	UHGV-0207166_4	UniRef90_A0A1Y4CHH6	79.7	2.58e-18	Transposase	N/A
eggNOG-mapper	UHGV-0207166_4	411467.BACCAP_04675	77.4	3.55e-18	Excisionase from transposon Tn916	N/A
Pfam	UHGV-0207166_4	PF09035	N/A	N/A	Excisionase from transposon Tn916	Tn916-Xis
structural_annotation	UHGV-0207166_4	PF09035,TIGR01764	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207166_5	1235800.C819_02253	60.5	0.000000015	N/A	N/A
KOfam	UHGV-0207166_6	K03698	48.9	0.00000000000011	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0207166_6	phrog_28876	137.1	1.10001e-40	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0207166_6	UniRef90_A0A373LVX6	239.0	0	HD domain-containing protein	N/A
eggNOG-mapper	UHGV-0207166_6	97139.C824_00737	177.0	0	PFAM HD domain	N/A
Pfam	UHGV-0207166_6	PF01966	N/A	N/A	HD domain	HD
COG	UHGV-0207166_6	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0207166_6	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_9	phrog_15077	110.2	3.5e-32	N/A	unknown function
UniRef90	UHGV-0207166_9	UniRef90_A0A3A6HZA9	115.0	7.51e-25	N/A	N/A
eggNOG-mapper	UHGV-0207166_9	1280698.AUJS01000007_gene1019	106.0	3.03e-22	N/A	N/A
structural_annotation	UHGV-0207166_9	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_11	phrog_7566	100.3	9.7e-30	N/A	unknown function
UniRef90	UHGV-0207166_11	UniRef90_A0A8D9UHC0	100.0	1.02e-25	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0207166_11	411902.CLOBOL_05695	70.5	0.0000000000000139	N/A	N/A
PHROG	UHGV-0207166_12	phrog_8470	212.3	0	N/A	unknown function
UniRef90	UHGV-0207166_12	UniRef90_UPI001960B0B5	112.0	1.58e-22	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0207166_12	411459.RUMOBE_00950	117.0	4.98e-25	PcfJ-like protein	N/A
Pfam	UHGV-0207166_12	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0207166_12	PF14284	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207166_13	UniRef90_UPI0008BD6C31	85.5	3.31e-18	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0207166_13	1235792.C808_00065	86.3	3.84e-19	N/A	N/A
COG	UHGV-0207166_14	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0207166_14	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_15	phrog_3584	211.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207166_15	UniRef90_A0A1I5LZL1	179.0	0	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0207166_15	1196322.A370_05744	195.0	0	N/A	N/A
structural_annotation	UHGV-0207166_15	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_18	phrog_11237	48.7	5.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0207166_18	411461.DORFOR_01161	65.9	0.00000000000559	N/A	N/A
KOfam	UHGV-0207166_19	K01154	51.9	0.0000000000000096	hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]	N/A
PHROG	UHGV-0207166_19	phrog_2668	53.0	0.0000000000000041	N/A	unknown function
UniRef90	UHGV-0207166_19	UniRef90_UPI001923DEFA	97.8	5.3e-23	restriction endonuclease subunit S	N/A
eggNOG-mapper	UHGV-0207166_19	592010.GCWU000182_001449	92.4	6.02e-22	Type I restriction modification DNA specificity domain	N/A
PADLOC	UHGV-0207166_19	Specificity_I_00036	48.7	0.00000000000017	Type I specificity subunit	RM
Pfam	UHGV-0207166_19	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
structural_annotation	UHGV-0207166_19	PF01420,COG0732	N/A	N/A	N/A	N/A
KOfam	UHGV-0207166_20	K03427	220.7	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0207166_20	phrog_6380	371.3	0	DNA methyltransferase	other
UniRef90	UHGV-0207166_20	UniRef90_A0A417EL32	401.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0207166_20	592010.GCWU000182_001448	372.0	0	HsdM N-terminal domain	N/A
PADLOC	UHGV-0207166_20	MTase_I_00005	246.0	0	Type I methyltransferase	RM
Pfam	UHGV-0207166_20	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0207166_20	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0207166_20	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207166_24	PF20037	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_25	phrog_750	88.3	6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0207166_25	97139.C824_00051	113.0	3.04e-31	N/A	N/A
structural_annotation	UHGV-0207166_25	PF03444,COG5045	N/A	N/A	N/A	N/A
KOfam	UHGV-0207166_29	K18830	74.0	2.5e-21	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0207166_29	phrog_4	55.9	0.0000000000000011	transcriptional repressor	transcription regulation
UniRef90	UHGV-0207166_29	UniRef90_UPI001D06FE9D	135.0	9.58e-39	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0207166_29	1235793.C809_03587	106.0	8.53e-28	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0207166_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207166_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0207166_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0207166_31	K23779	60.4	4.9e-17	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0207166_31	phrog_3	46.2	0.0000000000019	transcriptional repressor	transcription regulation
UniRef90	UHGV-0207166_31	UniRef90_A0A1M6B7T2	54.3	0.00000003	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0207166_31	410358.Mlab_0037	49.3	0.000000464	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0207166_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207166_31	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0207166_31	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_33	phrog_1220	131.3	1.7e-39	head protein	head and packaging
UniRef90	UHGV-0207166_33	UniRef90_Q73EE6	79.3	0.0000000000000243	Phage structural protein, truncation	N/A
eggNOG-mapper	UHGV-0207166_33	755731.Clo1100_3573	89.4	7.91e-19	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0207166_34	phrog_538	246.2	0	minor tail protein	tail
UniRef90	UHGV-0207166_34	UniRef90_UPI0004813F81	210.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0207166_34	428125.CLOLEP_01424	158.0	1.24996e-42	N/A	N/A
Pfam	UHGV-0207166_34	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0207166_34	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_35	phrog_33	55.0	0.000000000000002	distal tail protein Dit	tail
UniRef90	UHGV-0207166_35	UniRef90_UPI001D088A46	193.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0207166_35	665950.HMPREF1025_02008	121.0	6.86e-30	Phage tail protein	N/A
Pfam	UHGV-0207166_35	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0207166_35	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0207166_35	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0207166_36	K20478	70.6	2.4e-21	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0207166_36	phrog_5218	321.6	0	N/A	unknown function
UniRef90	UHGV-0207166_36	UniRef90_A0A1Y4GYF9	441.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0207166_36	908340.HMPREF9406_2570	340.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0207166_36	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0207166_36	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0207166_36	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_38	phrog_88	95.2	6.2e-28	major tail protein	tail
UniRef90	UHGV-0207166_38	UniRef90_A0A843GGC8	120.0	1.43e-29	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0207166_38	1120971.AUCA01000066_gene599	59.3	0.0000000355	Phage tail tube protein	N/A
NCBIFam	UHGV-0207166_38	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0207166_38	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207166_39	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207166_40	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207166_41	UniRef90_A0A416HJI0	124.0	1.2e-34	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0207166_41	1536774.H70357_10645	57.4	0.00000000437	N/A	N/A
Pfam	UHGV-0207166_41	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0207166_41	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0207166_41	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207166_42	UniRef90_UPI001E432EFF	72.4	0.00000000000000811	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0207166_42	768704.Desmer_4461	54.7	0.0000000111	N/A	N/A
Pfam	UHGV-0207166_42	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0207166_42	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_43	phrog_10	162.2	0	major head protein	head and packaging
UniRef90	UHGV-0207166_43	UniRef90_A0A417W9T2	431.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0207166_43	411470.RUMGNA_02065	412.0	0	N/A	N/A
Pfam	UHGV-0207166_43	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0207166_43	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0207166_43	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0207166_43	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0207166_44	K06904	117.5	1.5e-34	N/A	N/A
PHROG	UHGV-0207166_44	phrog_80	150.5	1.54143e-44	head maturation protease	head and packaging
UniRef90	UHGV-0207166_44	UniRef90_R6YQV2	258.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-0207166_44	927704.SELR_18200	199.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0207166_44	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0207166_44	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0207166_44	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0207166_44	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_45	phrog_12	130.8	9.1e-39	portal protein	head and packaging
UniRef90	UHGV-0207166_45	UniRef90_R6Z5U3	448.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0207166_45	457396.CSBG_01047	307.0	0	Portal protein	N/A
Pfam	UHGV-0207166_45	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0207166_45	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0207166_45	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_46	phrog_9	285.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0207166_46	UniRef90_R7A0H4	811.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0207166_46	1211817.CCAT010000007_gene1040	504.0	0	Terminase	N/A
Pfam	UHGV-0207166_46	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0207166_46	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0207166_46	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0207166_46	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207166_50	908340.HMPREF9406_2567	54.7	0.00000568	N/A	N/A
Pfam	UHGV-0207166_50	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0207166_51	phrog_4581	103.8	7.6e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0207166_51	UniRef90_A0A417W8X1	307.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0207166_51	97138.C820_00619	201.0	0	HNH endonuclease	N/A
Pfam	UHGV-0207166_51	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0207166_51	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0207166_51	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_52	phrog_51	45.1	0.00000000000024	terminase small subunit	head and packaging
UniRef90	UHGV-0207166_52	UniRef90_UPI001D08E9BA	129.0	1.07e-36	terminase small subunit	N/A
eggNOG-mapper	UHGV-0207166_52	702450.CUW_0530	68.9	0.000000000000206	Terminase Small Subunit	N/A
Pfam	UHGV-0207166_52	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0207166_52	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0207166_52	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0207166_53	K01448	123.7	2e-36	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0207166_53	phrog_435	197.6	0	endolysin	lysis
UniRef90	UHGV-0207166_53	UniRef90_A0A173UCF2	264.0	0	N-acetylmuramoyl-L-alanine amidase LytC	N/A
eggNOG-mapper	UHGV-0207166_53	411490.ANACAC_00597	195.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0207166_53	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0207166_53	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0207166_53	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0207166_53	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0207166_54	phrog_1863	80.1	1.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0207166_54	1232453.BAIF02000059_gene1610	83.2	3.25e-20	N/A	N/A
PHROG	UHGV-0207166_55	phrog_881	61.5	9.5e-18	holin	lysis
UniRef90	UHGV-0207166_55	UniRef90_R7EEV6	84.0	6.91e-20	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0207166_55	1321782.HMPREF1986_02282	75.9	1.89e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-0207166_55	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0207166_55	PF16938	N/A	N/A	N/A	N/A