UHGV-0207997 (vOTU-085812)

Viral Genome: UHGV-0207997

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0207997
vOTU ID	vOTU-085812
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781781_a1_ct47708_vs1@Unclassified_virus__sp._ctLuu1
Associated BioSample	SAMN09781781
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9735
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.35
Jumbo phage	No

Genome content
Genome length (bp)	52,716
GC content	41.35%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	95
CDS density	91%
Average CDS length (bps)	505.83
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0207997_5	1163671.JAGI01000002_gene1246	81.6	1.44e-16	N/A	N/A
KOfam	UHGV-0207997_9	K03466	240.8	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0207997_9	phrog_1358	178.9	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0207997_9	UniRef90_A0A7V7BYB2	187.0	0	DNA translocase FtsK	N/A
eggNOG-mapper	UHGV-0207997_9	882.DVU_1667	191.0	0	PFAM cell divisionFtsK SpoIIIE	N/A
PADLOC	UHGV-0207997_9	SspH_00004	135.1	1.8e-40	SspH	SSP
Pfam	UHGV-0207997_9	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0207997_9	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0207997_9	PF01580,PF17854,MF_01076,NF041214,COG0433	N/A	N/A	N/A	N/A
COG	UHGV-0207997_18	COG3600	N/A	N/A	N/A	N/A
Pfam	UHGV-0207997_25	PF11611	N/A	N/A	N/A	DUF4352
Pfam	UHGV-0207997_26	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
PHROG	UHGV-0207997_27	phrog_3136	119.5	1.3e-35	N/A	unknown function
UniRef90	UHGV-0207997_27	UniRef90_UPI001C02A61B	99.8	1.86e-22	ASCH domain-containing protein	N/A
COG	UHGV-0207997_27	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0207997_27	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207997_28	PF11132	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_29	phrog_8684	91.5	7.1e-27	N/A	unknown function
UniRef90	UHGV-0207997_29	UniRef90_A0A8I0HKU3	87.0	4.66e-19	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0207997_29	1347393.HG726022_gene3579	83.6	2.75e-18	YopX protein	N/A
Pfam	UHGV-0207997_29	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0207997_29	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0207997_29	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_33	phrog_14105	60.3	2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0207997_33	526218.Sterm_0811	80.9	0.00000000000000691	dextransucrase activity	N/A
COG	UHGV-0207997_33	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
KOfam	UHGV-0207997_34	K00571	119.0	5.1e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0207997_34	phrog_23224	82.6	3.1e-24	DNA methyltransferase	other
UniRef90	UHGV-0207997_34	UniRef90_A0A1V5WLT3	182.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0207997_34	981335.G4W934_9CAUD	158.0	4.2039e-45	N-methyltransferase activity	N/A
PADLOC	UHGV-0207997_34	MTase_II_00172	98.3	1e-28	Type II methyltransferase	RM
Pfam	UHGV-0207997_34	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-0207997_34	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_36	phrog_9958	89.9	2e-26	N/A	unknown function
UniRef90	UHGV-0207997_36	UniRef90_R5L718	68.6	0.0000000000928	N/A	N/A
eggNOG-mapper	UHGV-0207997_36	1160721.RBI_I01591	55.1	0.000000891	N/A	N/A
Pfam	UHGV-0207997_36	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0207997_36	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-0207997_38	K17680	107.9	7e-32	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0207997_38	phrog_239	115.2	5.9e-34	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207997_38	UniRef90_UPI001B710791	102.0	1.91e-20	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0207997_38	526218.Sterm_3911	97.8	1.32e-19	Toprim domain	N/A
Pfam	UHGV-0207997_38	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0207997_38	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0207997_38	PF03796,MF_04154,NF006443,COG0305	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207997_39	UniRef90_B0S4B3	61.2	0.000000000048	DarA_C domain-containing protein	N/A
Pfam	UHGV-0207997_39	PF18789	N/A	N/A	Defence against restriction A C-terminal	DarA_C
structural_annotation	UHGV-0207997_41	PF18892	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_44	phrog_4973	59.4	5e-17	N/A	unknown function
UniRef90	UHGV-0207997_44	UniRef90_UPI001D0904CC	63.9	0.0000000000087	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0207997_44	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0207997_44	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207997_45	1410625.JHWK01000005_gene1354	75.9	0.00000000000000109	N/A	N/A
PHROG	UHGV-0207997_46	phrog_19106	166.9	0	N/A	unknown function
UniRef90	UHGV-0207997_46	UniRef90_A0A6L5YG76	145.0	9.68998e-41	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0207997_46	658655.HMPREF0988_00875	128.0	5.06e-35	N/A	N/A
Pfam	UHGV-0207997_46	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-0207997_46	TIGR01453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207997_47	PF11506,MF_00984,NF006039,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_49	phrog_10048	71.2	2.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-0207997_49	1111134.HMPREF1253_1200	115.0	1.07e-28	N/A	N/A
structural_annotation	UHGV-0207997_49	PF06420,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_50	phrog_298	102.9	1.1e-30	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207997_50	UniRef90_A0A2D9C5V5	72.4	0.00000000000567	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0207997_50	508419.F8J184_9CAUD	67.0	0.0000000000424	nuclease activity	N/A
Pfam	UHGV-0207997_50	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
eggNOG-mapper	UHGV-0207997_54	1476973.JMMB01000006_gene3329	64.7	0.0000000000667	N/A	N/A
Pfam	UHGV-0207997_54	PF01844	N/A	N/A	HNH endonuclease	HNH
eggNOG-mapper	UHGV-0207997_55	1235802.C823_01050	96.3	1.85e-23	N/A	N/A
UniRef90	UHGV-0207997_58	UniRef90_A0A345BNU6	159.0	0	Spore surface glycoprotein	N/A
structural_annotation	UHGV-0207997_58	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_59	phrog_16490	124.7	1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0207997_59	476272.RUMHYD_01770	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0207997_73	1121346.KB899820_gene2840	58.2	0.00000967	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0207997_73	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0207997_75	PF10651,NF038186	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207997_78	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207997_81	469596.HMPREF9488_01310	94.4	3.01e-22	N/A	N/A
structural_annotation	UHGV-0207997_81	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207997_82	PF06141	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207997_84	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_86	phrog_29	221.5	0	major head protein	head and packaging
UniRef90	UHGV-0207997_86	UniRef90_UPI00082C04A5	281.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0207997_86	1114972.AUAW01000005_gene303	249.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0207997_86	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0207997_86	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_87	phrog_909	72.7	4.3e-21	major head protein	head and packaging
UniRef90	UHGV-0207997_87	UniRef90_A0A098MDH2	80.1	8.82e-17	N/A	N/A
eggNOG-mapper	UHGV-0207997_87	268407.PWYN_15680	80.1	1.48e-17	N/A	N/A
structural_annotation	UHGV-0207997_87	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_89	phrog_64	119.0	2.8e-35	portal protein	head and packaging
UniRef90	UHGV-0207997_89	UniRef90_A0A7X7EMS9	295.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0207997_89	428127.EUBDOL_01552	196.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0207997_89	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0207997_89	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_91	phrog_38	79.1	5.8e-23	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-0207997_91	428127.EUBDOL_01551	149.0	3.3e-37	chromosome segregation	N/A
COG	UHGV-0207997_91	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207997_91	PF17289,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0207997_93	phrog_28876	101.5	2.3e-32	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0207997_93	UniRef90_A0A417GQU0	174.0	0	Hydrolase	N/A
eggNOG-mapper	UHGV-0207997_93	1408437.JNJN01000035_gene1812	165.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0207997_93	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0207997_93	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
KOfam	UHGV-0207997_94	K02316	50.4	0.000000000000028	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0207997_94	phrog_11992	75.0	1.3e-21	N/A	unknown function
UniRef90	UHGV-0207997_94	UniRef90_S2YEG5	70.9	0.0000000000122	ZnF_CHCC domain-containing protein	N/A
eggNOG-mapper	UHGV-0207997_94	411902.CLOBOL_04301	59.3	0.0000000426	CHC2 zinc finger	N/A
Pfam	UHGV-0207997_94	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0207997_94	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
PHROG	UHGV-0207997_95	phrog_6251	123.4	2.2e-36	replisome organizer DnaA-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207997_95	UniRef90_UPI0012E135D4	96.7	6.75e-22	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0207997_95	545697.HMPREF0216_02809	101.0	2.07e-24	DnaD domain protein	N/A
COG	UHGV-0207997_95	COG3935	N/A	N/A	DNA replication protein DnaD	N/A