Overview | |
---|---|
UHGV ID | UHGV-0208166 |
vOTU ID | vOTU-000640 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SRS013940_a1_ct20571_vs1@Siphoviridae__sp._ctz1O1 |
Associated BioSample | SAMN00035158 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 34.27 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 7 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.977 |
Virus hallmark genes (geNomad) | 6 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 11.01 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 17,823 |
GC content | 57.87% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 21 |
CDS density | 86% |
Average CDS length (bps) | 728.57 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |