Overview | |
---|---|
UHGV ID | UHGV-0209926 |
vOTU ID | vOTU-102258 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SRS045936_a1_ct17422_vs1@Siphoviridae__sp._ctHzH1 |
Associated BioSample | SAMN00065945 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 41.71 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 3 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9521 |
Virus hallmark genes (geNomad) | 2 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 17.89 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 17,539 |
GC content | 56.32% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 31 |
CDS density | 86% |
Average CDS length (bps) | 485.71 |
Total tRNA genes | 1 |
Suppressor tRNA genes | 0 |