UHGV-0210296 (vOTU-048608)

Viral Genome: UHGV-0210296

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0210296
vOTU ID	vOTU-048608
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN11252294_a1_ct27008@circular@Myoviridae__sp._ctVjy008
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	14
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	60.78
Jumbo phage	No

Genome content
Genome length (bp)	38,786
GC content	43.76%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	93%
Average CDS length (bps)	600.05
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0210296_2	K07741	186.1	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0210296_2	phrog_63	164.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0210296_2	UniRef90_A0A1C5MD88	349.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-0210296_2	658655.HMPREF0988_02592	302.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0210296_2	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0210296_2	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0210296_2	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0210296_2	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0210296_3	K07729	43.8	0.0000000000051	K07729; putative transcriptional regulator	N/A
Pfam	UHGV-0210296_3	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
Pfam	UHGV-0210296_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0210296_7	K22300	50.0	0.000000000000063	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0210296_7	phrog_8	43.8	0.0000000000041	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210296_7	UniRef90_A0A1I0BEQ7	96.7	2.57e-23	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0210296_7	755731.Clo1100_1415	82.8	1.17e-18	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0210296_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0210296_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0210296_7	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_8	phrog_806	44.7	0.0000000000022	N/A	unknown function
UniRef90	UHGV-0210296_8	UniRef90_B0NCR2	151.0	4.56823e-43	N/A	N/A
eggNOG-mapper	UHGV-0210296_8	411468.CLOSCI_01239	151.0	7.70714e-44	N/A	N/A
Pfam	UHGV-0210296_8	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-0210296_8	PF16729,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-0210296_9	K22300	44.0	0.0000000000042	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0210296_9	UniRef90_A0A810PZN0	164.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0210296_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0210296_9	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0210296_10	K06400	205.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0210296_10	phrog_95	233.2	0	integrase	integration and excision
UniRef90	UHGV-0210296_10	UniRef90_A0A1C6CR25	359.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0210296_10	1256908.HMPREF0373_00206	333.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0210296_10	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0210296_10	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0210296_10	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0210296_10	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0210296_10	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210296_13	1226322.HMPREF1545_00079	55.1	0.0000000378	N/A	N/A
eggNOG-mapper	UHGV-0210296_14	476272.RUMHYD_01772	63.2	0.000000000195	N/A	N/A
structural_annotation	UHGV-0210296_14	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_15	phrog_20016	212.9	0	N/A	unknown function
UniRef90	UHGV-0210296_15	UniRef90_A0A285PT46	212.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0210296_15	397290.C810_05214	178.0	0	N/A	N/A
structural_annotation	UHGV-0210296_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_16	phrog_16490	147.5	7.00649e-44	N/A	unknown function
eggNOG-mapper	UHGV-0210296_16	1408437.JNJN01000043_gene803	93.2	5.17e-20	N/A	N/A
PHROG	UHGV-0210296_17	phrog_22984	60.3	3.3e-17	N/A	unknown function
PHROG	UHGV-0210296_18	phrog_21718	79.8	3.5e-23	N/A	unknown function
UniRef90	UHGV-0210296_18	UniRef90_A0A285PT36	127.0	1.64e-34	Consensus disorder prediction	N/A
eggNOG-mapper	UHGV-0210296_18	397290.C810_05210	72.4	0.0000000000000827	N/A	N/A
PHROG	UHGV-0210296_19	phrog_3754	80.3	2.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0210296_19	476272.RUMHYD_01764	152.0	0	N/A	N/A
UniRef90	UHGV-0210296_21	UniRef90_UPI001D091A6B	357.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0210296_21	1042156.CXIVA_01560	72.0	0.00000000000531	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0210296_21	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
Pfam	UHGV-0210296_21	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0210296_21	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0210296_21	PF03412,PF01471,COG3271	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_22	phrog_443	58.0	2.5e-16	holin	lysis
UniRef90	UHGV-0210296_22	UniRef90_UPI000C75746C	110.0	2.87e-30	holin	N/A
eggNOG-mapper	UHGV-0210296_22	626523.GCWU000342_01012	86.3	2.99e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0210296_22	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0210296_22	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_23	phrog_1863	54.4	7.9e-16	N/A	unknown function
UniRef90	UHGV-0210296_23	UniRef90_UPI001D0865D2	93.2	5e-23	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0210296_23	1226322.HMPREF1545_04027	67.8	0.000000000000071	N/A	N/A
eggNOG-mapper	UHGV-0210296_27	665956.HMPREF1032_00699	52.8	0.00000575	N/A	N/A
structural_annotation	UHGV-0210296_27	PF16990,NF033147,COG4935	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210296_28	411460.RUMTOR_01324	52.8	0.000000549	N/A	N/A
PHROG	UHGV-0210296_29	phrog_9994	143.6	1.19951e-42	N/A	unknown function
eggNOG-mapper	UHGV-0210296_29	1256908.HMPREF0373_00465	100.0	1.3e-21	N/A	N/A
Pfam	UHGV-0210296_29	PF09458	N/A	N/A	H-type lectin domain	H_lectin
structural_annotation	UHGV-0210296_29	PF20747,PF09458,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_30	phrog_538	139.7	2.09999e-41	minor tail protein	tail
UniRef90	UHGV-0210296_30	UniRef90_UPI001E2C8064	196.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0210296_30	665950.HMPREF1025_02520	179.0	0	N/A	N/A
Pfam	UHGV-0210296_30	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0210296_30	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_31	phrog_33	68.0	1.9e-19	distal tail protein Dit	tail
UniRef90	UHGV-0210296_31	UniRef90_A0A414P9H2	153.0	5.66993e-41	Phage tail protein	N/A
eggNOG-mapper	UHGV-0210296_31	742723.HMPREF9477_00896	166.0	0	N/A	N/A
structural_annotation	UHGV-0210296_31	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_32	phrog_6900	243.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0210296_32	UniRef90_A0A0D0SGC8	294.0	0	Phage minor tail protein	N/A
eggNOG-mapper	UHGV-0210296_32	1123312.KB904569_gene357	275.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0210296_32	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0210296_32	PF20155,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_34	phrog_885	76.7	2.6e-22	major tail protein	tail
UniRef90	UHGV-0210296_34	UniRef90_A0A843J9F0	213.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0210296_34	1504822.CCNO01000012_gene492	239.0	0	N/A	N/A
structural_annotation	UHGV-0210296_34	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_35	phrog_17405	40.2	0.00000000005	head protein	head and packaging
structural_annotation	UHGV-0210296_35	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_36	phrog_17977	66.5	3.3e-19	N/A	unknown function
UniRef90	UHGV-0210296_36	UniRef90_UPI00141211AB	125.0	5.54e-35	head-tail adaptor protein	N/A
structural_annotation	UHGV-0210296_36	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_38	phrog_544	187.2	0	major head protein	head and packaging
UniRef90	UHGV-0210296_38	UniRef90_A0A810PZM2	375.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0210296_38	1347392.CCEZ01000005_gene1236	268.0	0	N/A	N/A
structural_annotation	UHGV-0210296_38	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210296_39	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_40	phrog_5	52.5	0.000000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-0210296_40	UniRef90_A0A7X5E1T2	112.0	2.19e-29	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0210296_40	268407.PWYN_03010	74.7	0.00000000000000323	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-0210296_40	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_41	phrog_595	95.1	1.1e-27	head maturation protease	head and packaging
UniRef90	UHGV-0210296_41	UniRef90_A0A285PUG1	234.0	0	Phage head morphogenesis domain	N/A
eggNOG-mapper	UHGV-0210296_41	1280685.AUKC01000004_gene1632	120.0	2.97e-28	Phage Mu protein F like protein	N/A
Pfam	UHGV-0210296_41	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0210296_41	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0210296_41	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210296_41	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_42	phrog_64	169.8	0	portal protein	head and packaging
UniRef90	UHGV-0210296_42	UniRef90_A0A856HZB4	505.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0210296_42	673376.F2VHW1_9CAUD	210.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0210296_42	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0210296_42	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_43	phrog_21498	295.2	0	N/A	unknown function
UniRef90	UHGV-0210296_43	UniRef90_A0A2N6Q6T2	231.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0210296_43	1095750.HMPREF9970_2290	257.0	0	chromosome segregation	N/A
COG	UHGV-0210296_43	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0210296_43	PF05869,TIGR01712	N/A	N/A	N/A	N/A
KOfam	UHGV-0210296_44	K06909	125.6	4.8e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0210296_44	phrog_10250	180.8	0	N/A	unknown function
UniRef90	UHGV-0210296_44	UniRef90_A0A3R6SJF4	572.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0210296_44	411490.ANACAC_00783	536.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0210296_44	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0210296_44	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0210296_44	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0210296_44	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0210296_45	K07474	124.0	2e-36	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0210296_45	phrog_2606	335.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-0210296_45	UniRef90_A0A416BKP7	381.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0210296_45	478749.BRYFOR_07604	282.0	0	terminase, small subunit	N/A
Pfam	UHGV-0210296_45	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0210296_45	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0210296_45	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0210296_45	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210296_46	742738.HMPREF9460_02503	50.4	0.00000113	N/A	N/A
structural_annotation	UHGV-0210296_46	PF02001,TIGR01636	N/A	N/A	N/A	N/A
Pfam	UHGV-0210296_47	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
structural_annotation	UHGV-0210296_47	PF02796,PF06257,COG2771,COG4466	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210296_48	1235798.C817_05064	46.6	0.00000421	N/A	N/A
structural_annotation	UHGV-0210296_48	PF20063,TIGR01764	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_49	phrog_9804	130.4	1.1e-38	N/A	unknown function
UniRef90	UHGV-0210296_49	UniRef90_A0A174S716	242.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0210296_49	585394.RHOM_14005	122.0	1.1e-32	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0210296_49	cluster_137185	119.0	5.05e-36	NA	N/A
Pfam	UHGV-0210296_49	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0210296_49	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_50	phrog_5708	254.8	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210296_50	UniRef90_R6E0A4	247.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-0210296_50	1391647.AVSV01000022_gene2531	221.0	0	DnaD domain protein	N/A
COG	UHGV-0210296_50	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0210296_50	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_51	phrog_244	89.5	4.5e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0210296_51	1280692.AUJL01000025_gene2095	112.0	2.12e-30	N/A	N/A
structural_annotation	UHGV-0210296_51	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210296_52	PF11998,COG5420	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_53	phrog_4433	61.2	2.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0210296_53	665950.HMPREF1025_01373	74.3	0.000000000000546	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0210296_53	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-0210296_54	K07455	201.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0210296_54	phrog_148	222.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210296_54	UniRef90_A0A844E2H7	465.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0210296_54	1095750.HMPREF9970_1675	356.0	0	RecT family	N/A
Pfam	UHGV-0210296_54	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0210296_54	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0210296_54	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0210296_54	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_55	phrog_674	126.8	1.6e-37	N/A	unknown function
UniRef90	UHGV-0210296_55	UniRef90_UPI00137A8C4D	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210296_55	1095750.HMPREF9970_1676	183.0	0	N/A	N/A
Pfam	UHGV-0210296_55	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0210296_55	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0210296_56	phrog_434	163.2	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210296_56	UniRef90_A0A416VA03	322.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0210296_56	1095750.HMPREF9970_1677	305.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0210296_56	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0210296_56	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0210296_56	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0210296_56	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A