UHGV-0210389 (vOTU-116858)

Viral Genome: UHGV-0210389

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0210389
vOTU ID	vOTU-116858
Representative Genome?	Yes
Source	CHVD
Original genome ID	SRS043701_a1_ct17669_vs1@Siphoviridae__sp._ctT7q1
Associated BioSample	SAMN00063710
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	79.51 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9751
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.84
Jumbo phage	No

Genome content
Genome length (bp)	34,408
GC content	53.07%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	56
CDS density	93%
Average CDS length (bps)	573.64
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 79.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0210389_1	K04748	239.3	0	norQ; nitric oxide reductase NorQ protein	N/A
PHROG	UHGV-0210389_1	phrog_249	111.8	8.9e-33	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0210389_1	UniRef90_A0A1Q6QBQ2	596.0	0	ATPase	N/A
eggNOG-mapper	UHGV-0210389_1	1519439.JPJG01000016_gene355	632.0	0	AAA domain (dynein-related subfamily)	N/A
Pfam	UHGV-0210389_1	PF07728	N/A	N/A	AAA domain (dynein-related subfamily)	AAA_5
COG	UHGV-0210389_1	COG0714	N/A	N/A	MoxR-like ATPase	N/A
KOfam	UHGV-0210389_2	K02448	65.4	4.2e-19	norD; nitric oxide reductase NorD protein	N/A
UniRef90	UHGV-0210389_2	UniRef90_A0A329U7E4	628.0	0	VWFA domain-containing protein	N/A
eggNOG-mapper	UHGV-0210389_2	1519439.JPJG01000016_gene354	1145.0	0	von Willebrand factor (vWF) type A domain	N/A
COG	UHGV-0210389_2	COG4548	N/A	N/A	Nitric oxide reductase activation protein	N/A
KOfam	UHGV-0210389_3	K07052	69.1	5.7e-20	K07052; CAAX protease family protein	N/A
UniRef90	UHGV-0210389_3	UniRef90_A0A349PT18	508.0	0	CPBP family intramembrane metalloprotease	N/A
eggNOG-mapper	UHGV-0210389_3	742765.HMPREF9457_03197	421.0	0	CAAX protease self-immunity	N/A
Pfam	UHGV-0210389_3	PF02517	N/A	N/A	Type II CAAX prenyl endopeptidase Rce1-like	Rce1-like
COG	UHGV-0210389_3	COG1266	N/A	N/A	Membrane protease YdiL, CAAX protease family	N/A
eggNOG-mapper	UHGV-0210389_4	1232443.BAIA02000078_gene6	58.9	0.00000000116	N/A	N/A
PHROG	UHGV-0210389_5	phrog_28802	43.6	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0210389_5	476272.RUMHYD_01772	59.3	0.00000000512	N/A	N/A
PHROG	UHGV-0210389_6	phrog_20016	191.5	0	N/A	unknown function
UniRef90	UHGV-0210389_6	UniRef90_A0A285PT46	169.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0210389_6	1226322.HMPREF1545_00077	155.0	0	N/A	N/A
structural_annotation	UHGV-0210389_6	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_7	phrog_16490	138.8	7.29936e-42	N/A	unknown function
eggNOG-mapper	UHGV-0210389_7	1408437.JNJN01000043_gene803	172.0	0	N/A	N/A
PHROG	UHGV-0210389_8	phrog_22984	82.6	3.7e-24	N/A	unknown function
PHROG	UHGV-0210389_9	phrog_21718	113.4	1.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-0210389_9	397290.C810_05210	72.4	0.0000000000000674	N/A	N/A
PHROG	UHGV-0210389_10	phrog_3754	110.1	1.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0210389_10	1226322.HMPREF1545_00073	167.0	0	N/A	N/A
PHROG	UHGV-0210389_13	phrog_25567	44.6	0.0000000000019	N/A	unknown function
COG	UHGV-0210389_13	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0210389_13	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_14	phrog_21825	117.4	1.2e-34	endolysin	lysis
UniRef90	UHGV-0210389_14	UniRef90_R5SN87	279.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210389_14	693746.OBV_22650	147.0	1.02001e-41	CHAP domain	N/A
Pfam	UHGV-0210389_14	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0210389_14	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0210389_14	TIGR02594	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_15	phrog_13256	62.4	4.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0210389_15	1226322.HMPREF1545_00166	73.6	2.15e-16	N/A	N/A
PHROG	UHGV-0210389_17	phrog_937	45.2	0.0000000000017	hemolysin	other
eggNOG-mapper	UHGV-0210389_17	1519439.JPJG01000023_gene533	72.0	0.00000000000000384	N/A	N/A
PHROG	UHGV-0210389_18	phrog_27545	139.3	1.29998e-41	N/A	unknown function
UniRef90	UHGV-0210389_18	UniRef90_D1PRE7	132.0	6.77e-35	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-0210389_18	1519439.JPJG01000060_gene1895	440.0	0	N/A	N/A
structural_annotation	UHGV-0210389_18	PF16170	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_20	phrog_21962	57.9	1.1e-19	tail protein	tail
eggNOG-mapper	UHGV-0210389_20	1519439.JPJG01000060_gene1892	236.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0210389_20	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0210389_20	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0210389_22	PF20942,NF041894,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210389_23	1235797.C816_04179	207.0	0	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0210389_23	PF14594	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_24	phrog_32308	45.8	0.000000000000083	N/A	unknown function
UniRef90	UHGV-0210389_24	UniRef90_A0A2Z4QA17	265.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0210389_24	1235797.C816_04180	313.0	0	N/A	N/A
structural_annotation	UHGV-0210389_24	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_25	phrog_1194	76.8	2.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0210389_25	1232443.BAIA02000078_gene17	130.0	1.76e-37	N/A	N/A
structural_annotation	UHGV-0210389_25	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_26	phrog_1535	84.8	6.7e-36	tail length tape measure protein	tail
UniRef90	UHGV-0210389_26	UniRef90_A0A810PX76	136.0	9.09e-30	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0210389_26	693746.OBV_18190	251.0	0	domain protein	N/A
COG	UHGV-0210389_26	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210389_26	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_27	phrog_17658	59.5	5.3e-17	N/A	unknown function
UniRef90	UHGV-0210389_27	UniRef90_A0A316PG91	81.6	0.00000000000000408	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210389_27	768710.DesyoDRAFT_1122	80.1	9.54e-16	N/A	N/A
structural_annotation	UHGV-0210389_27	PF18116,COG3402	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_28	phrog_706	111.7	5.9e-33	N/A	unknown function
UniRef90	UHGV-0210389_28	UniRef90_A0A2U1BEN4	241.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0210389_28	693746.OBV_18170	177.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0210389_28	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0210389_28	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_29	phrog_11299	75.6	7.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0210389_29	693746.OBV_18160	180.0	0	N/A	N/A
structural_annotation	UHGV-0210389_29	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_30	phrog_3099	94.1	1.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0210389_30	1232443.BAIA02000078_gene23	238.0	0	N/A	N/A
structural_annotation	UHGV-0210389_30	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_31	phrog_3266	59.4	5.6e-17	tail completion	connector
eggNOG-mapper	UHGV-0210389_31	1232443.BAIA02000078_gene24	183.0	0	N/A	N/A
structural_annotation	UHGV-0210389_31	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_32	phrog_556	73.8	1.8e-21	minor head protein	head and packaging
UniRef90	UHGV-0210389_32	UniRef90_A0A2U1BEM0	195.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0210389_32	1226322.HMPREF1545_00054	156.0	0	Minor capsid protein	N/A
Pfam	UHGV-0210389_32	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0210389_32	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_33	phrog_3366	91.4	8.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0210389_33	1226322.HMPREF1545_00053	150.0	1.4013e-44	N/A	N/A
structural_annotation	UHGV-0210389_33	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_34	phrog_541	89.8	2.3e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0210389_34	411462.DORLON_00785	53.5	0.000000411	N/A	N/A
PHROG	UHGV-0210389_35	phrog_29	181.8	0	major head protein	head and packaging
UniRef90	UHGV-0210389_35	UniRef90_UPI0004AE1FFD	435.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0210389_35	1232443.BAIA02000078_gene29	435.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0210389_35	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0210389_35	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_36	phrog_909	42.1	0.0000000000091	major head protein	head and packaging
UniRef90	UHGV-0210389_36	UniRef90_K1TUL5	65.1	0.000000000219	N/A	N/A
Pfam	UHGV-0210389_36	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
structural_annotation	UHGV-0210389_36	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_37	phrog_194	51.3	0.000000000000022	head scaffolding protein	head and packaging
UniRef90	UHGV-0210389_37	UniRef90_UPI00189CE417	126.0	2.22e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0210389_37	1232443.BAIA02000078_gene31	133.0	4.13e-37	N/A	N/A
structural_annotation	UHGV-0210389_37	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210389_38	PF19593	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_40	phrog_581	273.3	0	minor head protein	head and packaging
UniRef90	UHGV-0210389_40	UniRef90_UPI001D080D49	530.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0210389_40	1226322.HMPREF1545_00046	345.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0210389_40	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0210389_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210389_40	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_41	phrog_8680	230.9	0	N/A	unknown function
UniRef90	UHGV-0210389_41	UniRef90_A0A3R6D7I3	264.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210389_41	411470.RUMGNA_02208	238.0	0	N/A	N/A
Pfam	UHGV-0210389_41	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0210389_41	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0210389_43	phrog_533	311.8	0	portal protein	head and packaging
UniRef90	UHGV-0210389_43	UniRef90_UPI00189D71DB	585.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0210389_43	1232443.BAIA02000078_gene36	561.0	0	N/A	N/A
structural_annotation	UHGV-0210389_43	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0210389_44	K06909	117.8	1.1e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0210389_44	phrog_10250	163.3	0	N/A	unknown function
UniRef90	UHGV-0210389_44	UniRef90_UPI000462EB3C	644.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0210389_44	1226322.HMPREF1545_00043	574.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0210389_44	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0210389_44	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0210389_44	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0210389_44	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210389_45	UniRef90_UPI0009523D83	164.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0210389_45	1226322.HMPREF1545_00042	157.0	0	N/A	N/A
structural_annotation	UHGV-0210389_45	PF13542	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210389_46	UniRef90_A0A285PYI3	66.2	0.00000000000494	Homeodomain-like domain	N/A
eggNOG-mapper	UHGV-0210389_46	742738.HMPREF9460_02503	123.0	3.02e-35	N/A	N/A
structural_annotation	UHGV-0210389_46	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210389_48	445972.ANACOL_00168	46.2	0.00001	N/A	N/A
PHROG	UHGV-0210389_53	phrog_22543	43.7	0.0000000000043	N/A	unknown function
UniRef90	UHGV-0210389_53	UniRef90_A0A8D9PDT5	154.0	0	Hydrogenase/urease nickel incorporation protein	N/A
KOfam	UHGV-0210389_54	K19779	41.5	0.000000000021	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-0210389_54	phrog_599	51.5	0.000000000000024	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0210389_54	UniRef90_A0A1M6HP95	54.3	0.0000000271	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0210389_54	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0210389_54	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0210389_54	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0210389_54	PF14354,NF007260	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210389_56	UniRef90_UPI0012AD39DD	61.6	0.0000000128	leucine-rich repeat protein	N/A