Overview | |
---|---|
UHGV ID | UHGV-0210654 |
vOTU ID | vOTU-161196 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SAMN10080927_a1_ct12424_vs1@linear@Siphoviridae__sp._ctYuh1 |
Associated BioSample | SAMN10080927 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 39.55 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 7 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9806 |
Virus hallmark genes (geNomad) | 1 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 11.34 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 18,407 |
GC content | 44.39% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 37 |
CDS density | 84% |
Average CDS length (bps) | 419.35 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |