UHGV-0210878 (vOTU-092973)

Viral Genome: UHGV-0210878

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0210878
vOTU ID	vOTU-092973
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN11252271_a1_ct371800_vs1@Unclassified_virus__sp._ctzob1
Associated BioSample	SAMN11252271
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.45 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	6
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9762
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	6.42
Jumbo phage	No

Genome content
Genome length (bp)	30,675
GC content	49.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	37
CDS density	92%
Average CDS length (bps)	758.76
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0210878_1	K07392	62.3	6.2e-18	PRS2; AAA family ATPase	N/A
PHROG	UHGV-0210878_1	phrog_3757	135.8	4.5e-40	N/A	unknown function
UniRef90	UHGV-0210878_1	UniRef90_A0A1C6HAZ4	255.0	0	ATP-dependent zinc metalloprotease FtsH	N/A
eggNOG-mapper	UHGV-0210878_1	457405.FSDG_01850	187.0	0	ATPase family associated with various cellular activities (AAA)	N/A
PADLOC	UHGV-0210878_1	IetA_00002	190.4	0	NA	ietAS
Pfam	UHGV-0210878_1	PF00004	N/A	N/A	ATPase family associated with various cellular activities (AAA)	AAA
COG	UHGV-0210878_1	COG0464	N/A	N/A	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	N/A
PHROG	UHGV-0210878_2	phrog_606	47.0	0.00000000000039	terminase small subunit	head and packaging
UniRef90	UHGV-0210878_2	UniRef90_UPI001D02F64C	82.8	3.78e-17	DNA-packaging protein	N/A
structural_annotation	UHGV-0210878_2	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0210878_3	K06909	288.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0210878_3	phrog_3717	201.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0210878_3	UniRef90_UPI001C30E6F9	432.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0210878_3	696281.Desru_1088	416.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0210878_3	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0210878_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0210878_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0210878_3	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0210878_6	phrog_156	107.8	9.2e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0210878_6	588581.Cpap_1526	281.0	0	N/A	N/A
structural_annotation	UHGV-0210878_6	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0210878_8	phrog_14242	95.6	3.7e-28	major head protein	head and packaging
UniRef90	UHGV-0210878_8	UniRef90_A0A3D2CI53	325.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0210878_8	935948.KE386495_gene2267	58.9	0.00000123	N/A	N/A
NCBIFam	UHGV-0210878_8	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0210878_8	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210878_10	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210878_11	1449126.JQKL01000002_gene1688	97.8	4.62e-19	N/A	N/A
structural_annotation	UHGV-0210878_11	PF11134,NF038128,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0210878_14	phrog_3904	45.3	0.00000000000001	tail fiber protein	tail
COG	UHGV-0210878_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0210878_14	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0210878_15	phrog_13589	42.5	0.0000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0210878_15	1298920.KI911353_gene4836	60.8	0.0000000121	ATPase involved in DNA repair	N/A
COG	UHGV-0210878_15	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
UniRef90	UHGV-0210878_16	UniRef90_UPI00164D57E4	123.0	2.51e-29	N/A	N/A
eggNOG-mapper	UHGV-0210878_16	931626.Awo_c11420	76.6	0.000000000000786	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-0210878_16	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0210878_16	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210878_16	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0210878_17	phrog_19111	42.9	6.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0210878_17	1298920.KI911353_gene541	69.7	0.0000000000367	ATPase involved in DNA repair	N/A
COG	UHGV-0210878_17	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0210878_20	phrog_4105	76.7	2.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0210878_20	610130.Closa_0762	77.8	3.52e-17	N/A	N/A
PHROG	UHGV-0210878_21	phrog_918	122.8	9.1e-37	N/A	unknown function
UniRef90	UHGV-0210878_21	UniRef90_UPI001D020797	119.0	1.83e-33	N/A	N/A
eggNOG-mapper	UHGV-0210878_21	632112.C1KFI4_9CAUD	110.0	3.39e-30	N/A	N/A
Pfam	UHGV-0210878_21	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0210878_21	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0210878_22	K19304	111.7	8.7e-33	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0210878_22	phrog_7767	104.4	5.8e-31	metallo-endopeptidase	other
UniRef90	UHGV-0210878_22	UniRef90_R5V821	77.8	0.000000000000742	Metalloendopeptidase-like membrane protein	N/A
eggNOG-mapper	UHGV-0210878_22	1121864.OMO_01118	96.3	1.18e-18	Peptidase family M23	N/A
Pfam	UHGV-0210878_22	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0210878_22	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0210878_22	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210878_24	1121334.KB911071_gene1966	53.9	0.0000000167	N/A	N/A
PHROG	UHGV-0210878_25	phrog_3754	107.8	8e-32	N/A	unknown function
eggNOG-mapper	UHGV-0210878_25	476272.RUMHYD_01764	162.0	0	N/A	N/A
PHROG	UHGV-0210878_26	phrog_21718	121.4	5.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-0210878_26	397290.C810_05210	93.6	4.93e-22	N/A	N/A
PHROG	UHGV-0210878_27	phrog_22984	71.7	8.9e-21	N/A	unknown function
PHROG	UHGV-0210878_28	phrog_16490	123.5	1.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-0210878_28	658655.HMPREF0988_00917	91.7	3.25e-19	N/A	N/A
PHROG	UHGV-0210878_29	phrog_20016	196.8	0	N/A	unknown function
UniRef90	UHGV-0210878_29	UniRef90_A0A2Z4QB67	174.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0210878_29	1226322.HMPREF1545_00077	165.0	0	N/A	N/A
structural_annotation	UHGV-0210878_29	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210878_30	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0210878_32	K14060	119.4	3.4e-35	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0210878_32	phrog_125	163.1	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210878_32	UniRef90_A0A7X7EJJ7	171.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0210878_32	877420.ATVW01000008_gene521	171.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0210878_32	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0210878_32	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0210878_32	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0210878_33	phrog_2172	128.0	5.9e-38	N/A	unknown function
UniRef90	UHGV-0210878_33	UniRef90_W1I1M7	161.0	4.2039e-45	Uncultured bacterium plasmid pRGI00069	N/A
eggNOG-mapper	UHGV-0210878_33	1408311.JNJM01000024_gene619	138.0	8.71e-37	Initiator Replication protein	N/A
Pfam	UHGV-0210878_33	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0210878_33	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0210878_33	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0210878_33	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
PHROG	UHGV-0210878_37	phrog_22978	285.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0210878_37	1410650.JHWL01000003_gene2814	186.0	1.4013e-44	N/A	N/A