UHGV-0210881 (vOTU-142355)

Viral Genome: UHGV-0210881

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0210881
vOTU ID	vOTU-142355
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN11252271_a1_ct52121_vs1@Siphoviridae__sp._ctliv1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.92 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9825
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.23
Jumbo phage	No

Genome content
Genome length (bp)	24,541
GC content	53.20%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	40
CDS density	95%
Average CDS length (bps)	581.10
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0210881_1	phrog_22543	40.6	0.000000000025	N/A	unknown function
KOfam	UHGV-0210881_2	K00571	99.2	4.9e-29	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0210881_2	phrog_23224	200.5	0	DNA methyltransferase	other
UniRef90	UHGV-0210881_2	UniRef90_D4K450	367.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0210881_2	718252.FP2_06750	367.0	0	DNA methylase	N/A
PADLOC	UHGV-0210881_2	MTase_II_00172	87.7	5.3e-27	Type II methyltransferase	RM
Pfam	UHGV-0210881_2	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0210881_2	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0210881_2	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210881_3	445972.ANACOL_00168	48.5	0.00000126	N/A	N/A
KOfam	UHGV-0210881_6	K22300	46.2	0.00000000000089	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0210881_6	phrog_8	68.6	1.3e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210881_6	UniRef90_A0A8D9PDC4	104.0	5.2e-28	Repressor protein	N/A
eggNOG-mapper	UHGV-0210881_6	1226322.HMPREF1545_00039	76.6	1.13e-17	sequence-specific DNA binding	N/A
Pfam	UHGV-0210881_6	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0210881_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0210881_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210881_7	UniRef90_UPI0018AC41F1	152.0	2.8026e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0210881_7	1226322.HMPREF1545_00042	124.0	9.18e-35	N/A	N/A
structural_annotation	UHGV-0210881_7	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0210881_8	K06909	376.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0210881_8	phrog_3717	160.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0210881_8	UniRef90_A0A2U1BEH4	699.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0210881_8	33035.JPJF01000106_gene3136	459.0	0	Terminase small subunit	N/A
Pfam	UHGV-0210881_8	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0210881_8	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0210881_8	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0210881_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0210881_8	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_9	phrog_533	355.9	0	portal protein	head and packaging
UniRef90	UHGV-0210881_9	UniRef90_UPI0006C81717	688.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0210881_9	1226322.HMPREF1545_00044	597.0	0	N/A	N/A
Pfam	UHGV-0210881_9	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0210881_9	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_10	phrog_581	282.2	0	minor head protein	head and packaging
UniRef90	UHGV-0210881_10	UniRef90_UPI001D080D49	584.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0210881_10	1226322.HMPREF1545_00046	373.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0210881_10	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0210881_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210881_10	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210881_11	PF18152	N/A	N/A	N/A	N/A
Pfam	UHGV-0210881_12	PF01129	N/A	N/A	NAD:arginine ADP-ribosyltransferase	ART
UniRef90	UHGV-0210881_14	UniRef90_A0A2Z4Q9Y8	76.3	0.0000000000000457	Minor structural protein	N/A
eggNOG-mapper	UHGV-0210881_14	1232443.BAIA02000078_gene31	90.5	1.33e-20	N/A	N/A
structural_annotation	UHGV-0210881_14	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_15	phrog_10	166.6	0	major head protein	head and packaging
UniRef90	UHGV-0210881_15	UniRef90_A0A2U1BEF2	509.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0210881_15	1226322.HMPREF1545_00050	481.0	0	Phage capsid family	N/A
Pfam	UHGV-0210881_15	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0210881_15	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0210881_15	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0210881_15	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_16	phrog_541	110.2	1.1e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0210881_16	642492.Clole_0822	62.8	0.000000000121	N/A	N/A
PHROG	UHGV-0210881_17	phrog_3366	90.5	1.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0210881_17	1226322.HMPREF1545_00053	137.0	1.94e-39	N/A	N/A
structural_annotation	UHGV-0210881_17	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_18	phrog_556	70.3	2.2e-20	minor head protein	head and packaging
UniRef90	UHGV-0210881_18	UniRef90_UPI00195E1497	184.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0210881_18	1226322.HMPREF1545_00054	152.0	1.4013e-45	Minor capsid protein	N/A
Pfam	UHGV-0210881_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0210881_18	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_19	phrog_3266	45.0	0.0000000000015	tail completion	connector
eggNOG-mapper	UHGV-0210881_19	1232443.BAIA02000078_gene24	153.0	0	N/A	N/A
structural_annotation	UHGV-0210881_19	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_20	phrog_3099	93.1	3.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0210881_20	1232443.BAIA02000078_gene23	234.0	0	N/A	N/A
structural_annotation	UHGV-0210881_20	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_21	phrog_11299	89.2	4.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0210881_21	693746.OBV_18160	103.0	2.8e-26	N/A	N/A
structural_annotation	UHGV-0210881_21	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_22	phrog_706	120.1	1.6e-35	N/A	unknown function
UniRef90	UHGV-0210881_22	UniRef90_UPI000682A80B	246.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0210881_22	693746.OBV_18170	239.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0210881_22	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0210881_22	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_23	phrog_806	71.0	1.4e-20	N/A	unknown function
UniRef90	UHGV-0210881_23	UniRef90_UPI00137B5163	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210881_23	397290.C810_05150	144.0	8.38999e-41	N/A	N/A
Pfam	UHGV-0210881_23	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0210881_23	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_24	phrog_1535	83.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0210881_24	UniRef90_A0A810PX76	144.0	2.22e-32	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0210881_24	1235797.C816_04182	280.0	0	SLT domain	N/A
COG	UHGV-0210881_24	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210881_24	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_25	phrog_1194	81.7	7.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0210881_25	1232443.BAIA02000078_gene17	121.0	3.88e-34	N/A	N/A
structural_annotation	UHGV-0210881_25	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_26	phrog_32308	49.6	0.0000000000000064	N/A	unknown function
UniRef90	UHGV-0210881_26	UniRef90_A0A2Z4QA17	267.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0210881_26	1235797.C816_04180	314.0	0	N/A	N/A
structural_annotation	UHGV-0210881_26	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210881_27	UniRef90_A0A810QCC8	154.0	6.21e-39	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210881_27	1235797.C816_04179	218.0	0	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0210881_27	PF14594	N/A	N/A	N/A	N/A
Pfam	UHGV-0210881_28	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
COG	UHGV-0210881_28	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-0210881_28	PF21605,NF041825,COG3198	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_30	phrog_21962	49.2	1.2e-16	tail protein	tail
eggNOG-mapper	UHGV-0210881_30	1519439.JPJG01000060_gene1892	203.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0210881_30	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0210881_30	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-0210881_32	1519439.JPJG01000060_gene1895	147.0	3.59994e-42	N/A	N/A
structural_annotation	UHGV-0210881_32	PF10618	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210881_34	1519439.JPJG01000060_gene1892	159.0	1.6e-39	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0210881_34	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0210881_34	PF20622	N/A	N/A	N/A	N/A
PHROG	UHGV-0210881_37	phrog_4105	41.7	0.00000000002	N/A	unknown function
PHROG	UHGV-0210881_39	phrog_13256	54.2	0.0000000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0210881_39	1519439.JPJG01000060_gene1898	73.6	1.08e-16	N/A	N/A
UniRef90	UHGV-0210881_40	UniRef90_UPI001EE0524E	112.0	1.82e-29	M15 family metallopeptidase	N/A
eggNOG-mapper	UHGV-0210881_40	1519439.JPJG01000023_gene536	129.0	1.5e-36	D-alanyl-D-alanine carboxypeptidase	N/A
COG	UHGV-0210881_40	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A