UHGV-0211022 (vOTU-048712)

Viral Genome: UHGV-0211022

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0211022
vOTU ID	vOTU-048712
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN10290179_a1_ct466@circular@Myoviridae__sp._cthcw466
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9809
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.84
Jumbo phage	No

Genome content
Genome length (bp)	43,297
GC content	51.50%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	73
CDS density	87%
Average CDS length (bps)	517.15
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0211022_2	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_6	phrog_434	303.1	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211022_6	UniRef90_A0A354AUE1	276.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0211022_6	1121344.JHZO01000003_gene985	278.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0211022_6	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0211022_6	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0211022_6	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0211022_6	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211022_7	PF12844,MF_00535,NF041951,COG5499	N/A	N/A	N/A	N/A
KOfam	UHGV-0211022_8	K07455	297.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0211022_8	phrog_148	277.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211022_8	UniRef90_U2SBP2	365.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0211022_8	1226322.HMPREF1545_00015	365.0	0	RecT family	N/A
Pfam	UHGV-0211022_8	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0211022_8	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0211022_8	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0211022_8	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0211022_9	K03111	140.9	1.29998e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0211022_9	phrog_44	149.1	2.24208e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211022_9	UniRef90_UPI001C118A83	157.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0211022_9	693746.OBV_12860	150.0	8.40779e-45	Single-strand binding protein family	N/A
Pfam	UHGV-0211022_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0211022_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0211022_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0211022_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0211022_9	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0211022_10	K01160	47.0	0.00000000000067	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0211022_10	phrog_4632	62.3	4.9e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211022_10	UniRef90_A0A7X8IB41	153.0	1.4013e-45	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0211022_10	556263.FSEG_00477	62.4	0.0000000000916	N/A	N/A
structural_annotation	UHGV-0211022_10	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_11	phrog_4973	66.9	2.7e-19	N/A	unknown function
UniRef90	UHGV-0211022_11	UniRef90_A0A3D3Y0P8	97.8	2.93e-25	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0211022_11	1072685.IX83_07155	53.1	0.0000000158	Helix-turn-helix domain	N/A
Pfam	UHGV-0211022_11	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0211022_11	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_12	phrog_16304	63.9	2.2e-18	N/A	unknown function
UniRef90	UHGV-0211022_12	UniRef90_UPI001D074B07	103.0	1.48e-23	N/A	N/A
eggNOG-mapper	UHGV-0211022_12	1121344.JHZO01000003_gene982	93.6	1.8e-20	N/A	N/A
Pfam	UHGV-0211022_12	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0211022_12	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_13	phrog_9804	152.2	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0211022_13	UniRef90_A0A3D1LDS2	176.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0211022_13	1121344.JHZO01000003_gene981	164.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0211022_13	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0211022_13	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0211022_15	K00390	90.9	9.3e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0211022_15	phrog_424	119.2	3.9e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0211022_15	UniRef90_A0A1Y4LU27	391.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0211022_15	1408437.JNJN01000032_gene2312	362.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0211022_15	BrxP_00001	58.0	7e-18	BrxP	BREX
Pfam	UHGV-0211022_15	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0211022_15	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0211022_15	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211022_16	476272.RUMHYD_03338	52.4	0.000000455	N/A	N/A
PHROG	UHGV-0211022_17	phrog_757	179.6	0	DNA methyltransferase	other
UniRef90	UHGV-0211022_17	UniRef90_A0A3A6EPW1	263.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0211022_17	748224.HMPREF9436_03069	244.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0211022_17	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0211022_17	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_18	phrog_599	46.8	0.00000000000061	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0211022_18	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0211022_18	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0211022_18	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0211022_18	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_19	phrog_3136	133.3	7.2e-40	N/A	unknown function
UniRef90	UHGV-0211022_19	UniRef90_UPI001C02A61B	124.0	7.4e-32	ASCH domain-containing protein	N/A
COG	UHGV-0211022_19	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0211022_19	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211022_21	UniRef90_A0A1I3J1T2	120.0	2.7e-32	N/A	N/A
Pfam	UHGV-0211022_21	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0211022_21	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_27	phrog_606	49.4	0.000000000000044	terminase small subunit	head and packaging
UniRef90	UHGV-0211022_27	UniRef90_UPI001D08D6B6	167.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0211022_27	1280663.ATVR01000009_gene2143	69.7	0.00000000000156	N/A	N/A
Pfam	UHGV-0211022_27	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0211022_27	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_30	phrog_6244	51.1	0.000000000000029	N/A	unknown function
eggNOG-mapper	UHGV-0211022_30	1354300.AUQY01000005_gene215	119.0	3.79e-34	N/A	N/A
structural_annotation	UHGV-0211022_31	PF14201	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211022_32	UniRef90_A0A7C6Y3R2	61.6	0.0000000000887	Helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0211022_32	PF20075,TIGR03070	N/A	N/A	N/A	N/A
Pfam	UHGV-0211022_33	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
COG	UHGV-0211022_33	COG1404	N/A	N/A	Serine protease, subtilisin family	N/A
structural_annotation	UHGV-0211022_33	PF12869,MF_00720,NF040991,COG4085	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_34	phrog_1233	83.4	3.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0211022_34	1232443.BAIA02000078_gene33	123.0	4.75e-35	N/A	N/A
PHROG	UHGV-0211022_35	phrog_38	190.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0211022_35	UniRef90_A0A810QA10	651.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0211022_35	1298920.KI911353_gene2682	425.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0211022_35	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0211022_35	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211022_35	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-0211022_36	K07741	99.5	8.1e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0211022_36	phrog_130	183.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0211022_36	UniRef90_UPI001C3C1005	330.0	0	Phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0211022_36	568816.Acin_1403	273.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0211022_36	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0211022_36	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0211022_36	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0211022_36	PF03374,PF02498,COG3645,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_38	phrog_64	201.9	0	portal protein	head and packaging
UniRef90	UHGV-0211022_38	UniRef90_UPI001C02F349	713.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0211022_38	1123263.AUKY01000015_gene1609	406.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0211022_38	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0211022_38	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_41	phrog_247	266.4	0	major head protein	head and packaging
UniRef90	UHGV-0211022_41	UniRef90_A0A3D0LY55	385.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0211022_41	1304866.K413DRAFT_3038	307.0	0	N/A	N/A
Pfam	UHGV-0211022_41	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0211022_41	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211022_43	UniRef90_UPI00164E20D5	142.0	4.77983e-42	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0211022_43	1298920.KI911353_gene2658	53.9	0.0000000612	N/A	N/A
Pfam	UHGV-0211022_43	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0211022_43	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211022_44	1121866.AUGK01000003_gene1432	72.4	0.0000000000000161	N/A	N/A
eggNOG-mapper	UHGV-0211022_45	1298920.KI911353_gene2654	74.3	0.000000000000024	N/A	N/A
structural_annotation	UHGV-0211022_46	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_47	phrog_158	51.0	0.000000000000027	major tail protein	tail
UniRef90	UHGV-0211022_47	UniRef90_A0A1C6L0H9	216.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0211022_47	1232453.BAIF02000058_gene1634	93.2	2.37e-22	N/A	N/A
structural_annotation	UHGV-0211022_47	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211022_48	UniRef90_A0A847YX95	100.0	1.9e-25	N/A	N/A
eggNOG-mapper	UHGV-0211022_48	1123263.AUKY01000015_gene1618	77.8	3.92e-17	N/A	N/A
Pfam	UHGV-0211022_48	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0211022_48	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211022_49	1211844.CBLM010000023_gene987	59.7	0.000000000527	N/A	N/A
PHROG	UHGV-0211022_50	phrog_1535	176.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0211022_50	UniRef90_R6DYC9	126.0	7.98e-26	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0211022_50	1121866.AUGK01000003_gene1437	405.0	0	phage tail tape measure protein	N/A
COG	UHGV-0211022_50	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0211022_51	phrog_1194	80.0	2.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0211022_51	702450.CUW_0546	53.5	0.000000204	N/A	N/A
structural_annotation	UHGV-0211022_51	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_52	phrog_6616	50.1	0.0000000000000074	tail protein	tail
eggNOG-mapper	UHGV-0211022_52	1235797.C816_04180	103.0	5.76e-24	N/A	N/A
structural_annotation	UHGV-0211022_52	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211022_53	1235797.C816_04179	95.9	9.96e-19	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0211022_53	NF041249,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_56	phrog_38044	63.2	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0211022_56	1123263.AUKY01000051_gene1069	62.8	0.0000000749	cellulase activity	N/A
COG	UHGV-0211022_56	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0211022_57	PF14686,PF07210,PF21582,TIGR03000,TIGR04183,COG2512	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211022_60	994573.T472_0212005	51.6	0.00000754	N/A	N/A
KOfam	UHGV-0211022_61	K08640	95.1	1.2e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0211022_61	phrog_894	59.0	7.8e-17	endolysin	lysis
UniRef90	UHGV-0211022_61	UniRef90_R5EEL2	294.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0211022_61	931626.Awo_c26840	111.0	5.07e-28	Peptidase M15	N/A
Pfam	UHGV-0211022_61	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0211022_61	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0211022_61	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211022_61	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_62	phrog_4105	96.0	2.3e-28	N/A	unknown function
UniRef90	UHGV-0211022_62	UniRef90_A0A8D9UHA9	126.0	9.31e-36	Holin protein	N/A
eggNOG-mapper	UHGV-0211022_62	742733.HMPREF9469_05011	134.0	8.09e-40	N/A	N/A
PHROG	UHGV-0211022_63	phrog_10091	103.2	1.9e-30	holin	lysis
UniRef90	UHGV-0211022_63	UniRef90_D7GNX3	133.0	6.3e-39	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0211022_63	97139.C824_05950	119.0	4.13e-34	Bacteriophage holin	N/A
Pfam	UHGV-0211022_63	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0211022_63	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0211022_63	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211022_63	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211022_64	PF01047,NF001066,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0211022_68	K06400	374.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0211022_68	phrog_95	365.4	0	integrase	integration and excision
UniRef90	UHGV-0211022_68	UniRef90_UPI00164E9A6A	504.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0211022_68	718252.FP2_29980	346.0	0	N/A	N/A
Pfam	UHGV-0211022_68	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0211022_68	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0211022_68	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0211022_68	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0211022_68	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211022_69	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0211022_72	phrog_8	43.1	0.0000000000083	transcriptional regulator	transcription regulation
UniRef90	UHGV-0211022_72	UniRef90_A0A8D9UHB1	75.9	0.0000000000000012	Repressor protein CI	N/A
Pfam	UHGV-0211022_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211022_72	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0211022_72	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A