UHGV-0211090 (vOTU-048722)

Viral Genome: UHGV-0211090

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0211090
vOTU ID	vOTU-048722
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN11252267_a1_ct17387@circular@Myoviridae__sp._ct8Jl387
Associated BioSample	SAMN11252267
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9791
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	20.82
Jumbo phage	No

Genome content
Genome length (bp)	38,648
GC content	55.80%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	91%
Average CDS length (bps)	593.80
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0211090_1	phrog_20388	82.7	4.3e-24	endolysin	lysis
UniRef90	UHGV-0211090_1	UniRef90_UPI0018CC5E5E	89.4	2.1e-17	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0211090_1	1203606.HMPREF1526_00253	97.8	1.92e-20	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0211090_1	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-0211090_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0211090_1	PF18013,PF01471,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_2	phrog_199	65.5	5.8e-19	holin	lysis
UniRef90	UHGV-0211090_2	UniRef90_A0A3C0NPD5	188.0	0	Holin	N/A
eggNOG-mapper	UHGV-0211090_2	742738.HMPREF9460_00365	167.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0211090_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0211090_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0211090_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0211090_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_4	phrog_3754	100.7	1.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0211090_4	476272.RUMHYD_01764	154.0	0	N/A	N/A
PHROG	UHGV-0211090_5	phrog_21718	105.9	3.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0211090_5	476272.RUMHYD_01768	75.9	0.0000000000000026	N/A	N/A
PHROG	UHGV-0211090_6	phrog_22984	72.8	2.5e-21	N/A	unknown function
PHROG	UHGV-0211090_7	phrog_16490	134.1	9.79998e-41	N/A	unknown function
eggNOG-mapper	UHGV-0211090_7	658655.HMPREF0988_00917	132.0	4.68e-35	N/A	N/A
PHROG	UHGV-0211090_8	phrog_20016	187.7	0	N/A	unknown function
UniRef90	UHGV-0211090_8	UniRef90_A0A285PT46	203.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0211090_8	1226322.HMPREF1545_00077	176.0	0	N/A	N/A
structural_annotation	UHGV-0211090_8	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211090_9	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211090_10	1226322.HMPREF1545_00079	100.0	4.81e-26	N/A	N/A
KOfam	UHGV-0211090_11	K14059	90.2	3.6e-26	int; integrase	N/A
PHROG	UHGV-0211090_11	phrog_1	116.9	2e-34	integrase	integration and excision
UniRef90	UHGV-0211090_11	UniRef90_UPI001874116E	395.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0211090_11	1235835.C814_03141	180.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0211090_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0211090_11	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0211090_11	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0211090_12	K07729	41.2	0.000000000025	K07729; putative transcriptional regulator	N/A
Pfam	UHGV-0211090_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211090_12	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0211090_12	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211090_13	UniRef90_A0A1Y4A0E8	306.0	0	SAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_13	1280696.ATVY01000034_gene3237	185.0	0	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation	N/A
structural_annotation	UHGV-0211090_13	PF12688	N/A	N/A	N/A	N/A
KOfam	UHGV-0211090_15	K18830	58.5	1.7e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0211090_15	phrog_8	49.7	0.000000000000069	transcriptional regulator	transcription regulation
UniRef90	UHGV-0211090_15	UniRef90_A0A1Q9J555	88.6	6e-20	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_15	748224.HMPREF9436_01444	84.7	5.23e-19	N/A	N/A
Pfam	UHGV-0211090_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211090_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0211090_15	PF12844,MF_02017,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211090_16	PF06034	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211090_21	UniRef90_UPI000F0633F9	54.3	0.0000000724	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0211090_21	693746.OBV_43260	51.6	0.000000142	N/A	N/A
PHROG	UHGV-0211090_23	phrog_664	43.4	0.0000000000000033	DNA binding protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0211090_23	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
Pfam	UHGV-0211090_23	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
PHROG	UHGV-0211090_25	phrog_38338	78.2	1.1e-22	N/A	unknown function
UniRef90	UHGV-0211090_25	UniRef90_UPI00137B3A8C	67.4	0.0000000000187	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0211090_25	693746.OBV_25410	98.6	7.05e-25	N/A	N/A
PHROG	UHGV-0211090_26	phrog_8470	269.7	0	N/A	unknown function
UniRef90	UHGV-0211090_26	UniRef90_UPI001C1063FF	209.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_26	1378168.N510_01842	196.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0211090_26	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0211090_26	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_27	phrog_15609	138.1	0	N/A	unknown function
UniRef90	UHGV-0211090_27	UniRef90_A0A7G9WGA3	116.0	5.75e-27	N/A	N/A
eggNOG-mapper	UHGV-0211090_27	1395513.P343_08065	107.0	8.11e-25	N/A	N/A
Pfam	UHGV-0211090_27	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0211090_27	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0211090_27	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_28	phrog_824	140.9	3.80032e-42	N/A	unknown function
UniRef90	UHGV-0211090_28	UniRef90_UPI00189BCDD7	154.0	1.4013e-45	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_28	1291050.JAGE01000001_gene480	122.0	1.04e-33	VRR_NUC	N/A
Pfam	UHGV-0211090_28	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0211090_29	phrog_24518	51.0	0.000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0211090_29	693746.OBV_25370	77.4	0.00000000000000373	N/A	N/A
Pfam	UHGV-0211090_31	PF08681	N/A	N/A	N/A	DUF1778
COG	UHGV-0211090_31	COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_34	phrog_3584	133.8	1.2e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0211090_34	1203606.HMPREF1526_00985	72.0	0.00000000000557	N/A	N/A
structural_annotation	UHGV-0211090_34	PF01446,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211090_36	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_37	phrog_620	136.7	1.4e-40	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211090_37	UniRef90_A0A810PZK9	172.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_37	226185.EF_2114	116.0	1.33e-28	DNA methylase	N/A
PADLOC	UHGV-0211090_37	MTase_II_00015	80.5	1.9e-23	Type II methyltransferase	RM
Pfam	UHGV-0211090_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0211090_37	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0211090_37	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
KOfam	UHGV-0211090_38	K07319	128.2	7.5e-38	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0211090_38	phrog_498	278.3	0	DNA methyltransferase	other
UniRef90	UHGV-0211090_38	UniRef90_A0A810Q3Z7	366.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_38	742823.HMPREF9465_00225	294.0	0	PFAM DNA methylase N-4 N-6	N/A
PADLOC	UHGV-0211090_38	MTase_II_00015	133.8	0	Type II methyltransferase	RM
Pfam	UHGV-0211090_38	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0211090_38	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0211090_38	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_39	phrog_309	110.9	8.7e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0211090_39	UniRef90_A0A174GY31	107.0	1.59e-27	Phage-like protein	N/A
eggNOG-mapper	UHGV-0211090_39	742733.HMPREF9469_01828	106.0	1.14e-27	transposase activity	N/A
COG	UHGV-0211090_39	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
KOfam	UHGV-0211090_40	K06909	130.1	2.2e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0211090_40	phrog_2	151.5	8.40779e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0211090_40	UniRef90_A0A373MY72	559.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0211090_40	1120746.CCNL01000014_gene2093	503.0	0	DNA packaging	N/A
Pfam	UHGV-0211090_40	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0211090_40	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0211090_40	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0211090_40	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_41	phrog_64	131.6	4.3e-39	portal protein	head and packaging
UniRef90	UHGV-0211090_41	UniRef90_A0A285PU84	409.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0211090_41	1035196.HMPREF9998_01723	83.2	0.0000000000000276	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0211090_41	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0211090_41	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_42	phrog_859	102.4	3.4e-30	portal protein	head and packaging
UniRef90	UHGV-0211090_42	UniRef90_A0A3A9EHQ6	333.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_42	1235792.C808_05364	190.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0211090_42	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0211090_42	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211090_42	PF04233,PF21814,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_43	phrog_35328	119.4	1.2e-35	N/A	unknown function
PHROG	UHGV-0211090_44	phrog_5	56.2	8.3e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0211090_44	UniRef90_UPI0018E4B047	72.8	0.000000000000122	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0211090_44	1280689.AUJC01000007_gene3313	68.6	0.00000000000128	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-0211090_44	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211090_45	UniRef90_A0A6B9SU02	87.8	4.15e-18	Fibronectin autolysin	N/A
structural_annotation	UHGV-0211090_45	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_46	phrog_544	171.6	0	major head protein	head and packaging
UniRef90	UHGV-0211090_46	UniRef90_A0A810PZM2	469.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_46	1347392.CCEZ01000005_gene1236	246.0	0	N/A	N/A
Pfam	UHGV-0211090_46	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0211090_46	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211090_48	UniRef90_A0A285PT57	50.8	0.0000095	Phage head-tail joining protein	N/A
Pfam	UHGV-0211090_48	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0211090_48	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211090_49	UniRef90_A0A415JI88	105.0	9.48e-27	N/A	N/A
structural_annotation	UHGV-0211090_49	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_50	phrog_885	59.9	3.1e-17	major tail protein	tail
UniRef90	UHGV-0211090_50	UniRef90_A0A843J9F0	186.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0211090_50	1111121.HMPREF1247_0789	206.0	0	N/A	N/A
structural_annotation	UHGV-0211090_50	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_51	phrog_18646	72.6	5.8e-21	N/A	unknown function
UniRef90	UHGV-0211090_51	UniRef90_B6CXF0	82.4	6.85e-18	Peptidase-colicin	N/A
eggNOG-mapper	UHGV-0211090_51	913865.DOT_5626	49.3	0.0000071	N/A	N/A
PHROG	UHGV-0211090_52	phrog_23464	267.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0211090_52	665950.HMPREF1025_02660	281.0	0	phage tail tape measure protein	N/A
COG	UHGV-0211090_52	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0211090_53	phrog_37549	43.2	0.0000000000012	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0211090_53	1195236.CTER_5103	97.1	6.21e-18	N/A	N/A
structural_annotation	UHGV-0211090_53	PF02010,PF06995,MF_04116,NF010681,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_54	phrog_1887	102.5	4.2e-30	tail protein	tail
eggNOG-mapper	UHGV-0211090_54	742740.HMPREF9474_04294	101.0	2.86e-21	N/A	N/A
structural_annotation	UHGV-0211090_54	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211090_55	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0211090_56	phrog_5073	78.6	7.1e-23	tail fiber protein	tail
structural_annotation	UHGV-0211090_57	PF21253,PF07210,NF038128,TIGR03000,COG2512	N/A	N/A	N/A	N/A