UHGV-0211800 (vOTU-029300)

Viral Genome: UHGV-0211800

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0211800
vOTU ID	vOTU-029300
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN10407349_a1_ct157684_vs1@Myoviridae__sp._ctUOl1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.22 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.64
Jumbo phage	No

Genome content
Genome length (bp)	28,348
GC content	50.73%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	98%
Average CDS length (bps)	675.81
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0211800_1	phrog_3584	155.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211800_1	UniRef90_UPI001D0EB55A	89.7	8.26e-18	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0211800_1	411470.RUMGNA_02047	121.0	4.58e-30	N/A	N/A
structural_annotation	UHGV-0211800_1	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_2	phrog_531	50.0	0.000000000000048	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211800_2	UniRef90_UPI00195B5ED3	59.7	0.0000000278	ribonuclease HI	N/A
Pfam	UHGV-0211800_2	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0211800_2	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0211800_2	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_3	phrog_24368	46.5	0.0000000000004	N/A	unknown function
PHROG	UHGV-0211800_4	phrog_7566	83.5	1.5e-24	N/A	unknown function
UniRef90	UHGV-0211800_4	UniRef90_A0A8D9UHC0	63.5	0.0000000000581	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0211800_4	1235800.C819_00511	75.1	9.66e-16	N/A	N/A
KOfam	UHGV-0211800_5	K01520	149.6	1.96182e-44	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0211800_5	phrog_135	147.0	6.86636e-44	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211800_5	UniRef90_A0A1I5VEA9	176.0	0	dUTP pyrophosphatase	N/A
eggNOG-mapper	UHGV-0211800_5	1408312.JNJS01000001_gene1658	166.0	0	dUTPase	N/A
Pfam	UHGV-0211800_5	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0211800_5	NF001862.0	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0211800_5	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0211800_5	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-0211800_6	K07319	88.4	4.5e-26	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0211800_6	phrog_16	228.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211800_6	UniRef90_R6WG22	1428.0	0	DNA methylase family protein	N/A
eggNOG-mapper	UHGV-0211800_6	1298920.KI911353_gene2709	1334.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0211800_6	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0211800_6	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0211800_6	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0211800_6	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0211800_10	K03111	133.3	2.7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0211800_10	phrog_44	125.4	2.7e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211800_10	UniRef90_R5CH32	288.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0211800_10	1280685.AUKC01000081_gene1299	197.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0211800_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0211800_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0211800_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0211800_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0211800_10	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_11	phrog_6568	65.1	7.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0211800_11	1203606.HMPREF1526_00241	50.4	0.000000139	N/A	N/A
PHROG	UHGV-0211800_12	phrog_11237	76.7	3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0211800_12	411461.DORFOR_01161	92.0	4.8e-22	N/A	N/A
PHROG	UHGV-0211800_14	phrog_119	66.6	3.3e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211800_14	UniRef90_R6ERW5	103.0	8.16e-27	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0211800_14	642492.Clole_0739	96.7	1.59e-24	HNH nucleases	N/A
COG	UHGV-0211800_14	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0211800_15	phrog_361	60.2	3.5e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0211800_15	UniRef90_UPI000307376F	75.1	0.0000000000000144	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0211800_15	1033744.CAEL01000029_gene1286	61.6	0.000000000417	Phage terminase, small subunit	N/A
Pfam	UHGV-0211800_15	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-0211800_16	phrog_9	310.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0211800_16	UniRef90_UPI00189ADFAA	937.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0211800_16	491915.Aflv_0661	724.0	0	Phage Terminase	N/A
Pfam	UHGV-0211800_16	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0211800_16	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0211800_16	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0211800_16	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_17	phrog_12	164.0	0	portal protein	head and packaging
UniRef90	UHGV-0211800_17	UniRef90_UPI000CF8AFF7	545.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0211800_17	33035.JPJF01000039_gene271	396.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0211800_17	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0211800_17	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0211800_17	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0211800_17	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0211800_18	K06904	155.3	0	N/A	N/A
PHROG	UHGV-0211800_18	phrog_80	165.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0211800_18	UniRef90_UPI000CF8530D	253.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0211800_18	913865.DOT_5634	240.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0211800_18	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0211800_18	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0211800_18	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0211800_18	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_19	phrog_10	164.1	0	major head protein	head and packaging
UniRef90	UHGV-0211800_19	UniRef90_R5V6C2	417.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0211800_19	1033744.CAEL01000029_gene1282	356.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0211800_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0211800_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0211800_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0211800_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_20	phrog_2550	54.6	9.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0211800_20	1226322.HMPREF1545_00117	58.9	0.000000000442	N/A	N/A
structural_annotation	UHGV-0211800_20	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_21	phrog_19734	74.7	5.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0211800_21	1235798.C817_04587	67.8	0.000000000000578	N/A	N/A
structural_annotation	UHGV-0211800_21	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_22	phrog_78	42.8	0.00000000001	tail terminator	connector
eggNOG-mapper	UHGV-0211800_22	1235798.C817_04588	95.9	3.11e-24	N/A	N/A
structural_annotation	UHGV-0211800_22	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_23	phrog_5	46.9	0.0000000000005	tail completion or Neck1 protein	connector
UniRef90	UHGV-0211800_23	UniRef90_R6UNR2	141.0	7.94e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0211800_23	908340.HMPREF9406_2573	141.0	1.33e-40	N/A	N/A
NCBIFam	UHGV-0211800_23	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0211800_23	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_24	phrog_88	92.9	3.4e-27	major tail protein	tail
UniRef90	UHGV-0211800_24	UniRef90_UPI001AEA00F8	57.4	0.000001	phage tail protein	N/A
NCBIFam	UHGV-0211800_24	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0211800_24	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0211800_27	K10421	40.5	0.000000000000014	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0211800_27	phrog_1272	112.5	9.1e-35	tail length tape measure protein	tail
UniRef90	UHGV-0211800_27	UniRef90_A0A350VIV1	226.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0211800_27	706433.HMPREF9430_01257	260.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0211800_27	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0211800_27	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0211800_27	PF10145,PF16454,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_28	phrog_33	59.8	6.8e-17	distal tail protein Dit	tail
UniRef90	UHGV-0211800_28	UniRef90_A0A1C6H6D2	150.0	2.32994e-41	Phage-related protein	N/A
eggNOG-mapper	UHGV-0211800_28	1235798.C817_04593	63.9	0.00000000193	phage tail	N/A
NCBIFam	UHGV-0211800_28	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0211800_28	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0211800_28	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_29	phrog_1067	288.5	0	minor head protein	head and packaging
UniRef90	UHGV-0211800_29	UniRef90_A0A7G9G6Y3	374.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0211800_29	1123263.AUKY01000068_gene489	300.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0211800_29	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0211800_29	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0211800_29	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0211800_29	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0211800_30	phrog_1067	100.4	2.2e-29	minor head protein	head and packaging
eggNOG-mapper	UHGV-0211800_30	1235793.C809_01930	107.0	7.27e-22	Prophage endopeptidase tail	N/A
COG	UHGV-0211800_30	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0211800_32	phrog_19280	47.2	0.00000000000016	N/A	unknown function
Pfam	UHGV-0211800_32	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0211800_33	phrog_17147	432.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0211800_33	411459.RUMOBE_01720	650.0	0	N/A	N/A
PHROG	UHGV-0211800_34	phrog_1423	91.1	1.1e-26	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211800_34	UniRef90_A0A3D2D981	260.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0211800_34	411459.RUMOBE_01719	263.0	0	reverse transcriptase	N/A
Pfam	UHGV-0211800_34	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0211800_34	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
PHROG	UHGV-0211800_38	phrog_4105	66.1	4.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0211800_38	1321782.HMPREF1986_02281	127.0	3.35e-36	N/A	N/A
PHROG	UHGV-0211800_40	phrog_608	47.3	0.00000000000029	holin	lysis
UniRef90	UHGV-0211800_40	UniRef90_R7N9M5	67.0	0.00000000000623	LL-H family phage holin	N/A
eggNOG-mapper	UHGV-0211800_40	1235792.C808_00574	57.4	0.00000000519	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0211800_40	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
eggNOG-mapper	UHGV-0211800_41	457412.RSAG_02810	69.7	0.0000000000000969	NlpC/P60 family	N/A
COG	UHGV-0211800_41	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A