Overview | |
---|---|
UHGV ID | UHGV-0212208 |
vOTU ID | vOTU-056026 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SRS078419_a1_ct139201_vs1@Caudovirales__sp._ctwGh1 |
Associated BioSample | SAMN00088586 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 71.51 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 15 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.978 |
Virus hallmark genes (geNomad) | 7 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 32.76 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 28,867 |
GC content | 55.20% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 46 |
CDS density | 91% |
Average CDS length (bps) | 572.74 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |