| Overview | |
|---|---|
| UHGV ID | UHGV-0212366 |
| vOTU ID | vOTU-000018 |
| Representative Genome? | No |
| Source | CHVD |
| Original genome ID | SRS142921_a1_ct43824_vs1@Podoviridae__sp._ctHJL1 |
| Associated BioSample | SAMN00142138 |
| Viral genome confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 47.34 (Low-quality) |
| Trimmed provirus | No |
| CheckV viral markers | 12 |
| CheckV host markers | 1 |
| Recoded stop codon | Yes |
| Viral Content | |
|---|---|
| geNomad score | 0.9763 |
| Virus hallmark genes (geNomad) | 5 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 14.19 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length (bp) | 82,968 |
| GC content | 32.00% |
| Genetic code | The Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code (4) |
| CDS genes | 123 |
| CDS density | 81% |
| Average CDS length (bps) | 544.98 |
| Total tRNA genes | 23 |
| Suppressor tRNA genes | 0 |