Overview | |
---|---|
UHGV ID | UHGV-0214570 |
vOTU ID | vOTU-014927 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SRS147425_a1_ct11560_vs01@Siphoviridae__sp._ct08e114@linear |
Associated BioSample | SAMN00146642 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 64.29 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 24 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9672 |
Virus hallmark genes (geNomad) | 7 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 55.74 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 104,050 |
GC content | 34.28% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 125 |
CDS density | 85% |
Average CDS length (bps) | 710.16 |
Total tRNA genes | 5 |
Suppressor tRNA genes | 0 |