UHGV-0221609 (vOTU-049188)

Viral Genome: UHGV-0221609

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0221609
vOTU ID	vOTU-049188
Representative Genome?	Yes
Source	mMGE
Original genome ID	k119_26225_round1256~2457854
Associated BioSample	SAMEA4588124
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9813
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.1
Jumbo phage	No

Genome content
Genome length (bp)	42,509
GC content	51.86%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	69
CDS density	90%
Average CDS length (bps)	557.09
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0221609_1	phrog_372	313.5	0	tail protein	tail
UniRef90	UHGV-0221609_1	UniRef90_A0A1C5RHT6	228.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0221609_1	1235796.C815_00905	180.0	0	N/A	N/A
Pfam	UHGV-0221609_1	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0221609_1	PF05895,MF_04116,NF010681,COG3291,COG5608	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_2	phrog_6616	116.3	1.6e-36	tail protein	tail
UniRef90	UHGV-0221609_2	UniRef90_A0A182BQ83	75.1	0.000000000369	Tail protein	N/A
eggNOG-mapper	UHGV-0221609_2	469596.HMPREF9488_01318	278.0	0	N/A	N/A
structural_annotation	UHGV-0221609_2	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_3	phrog_1194	124.5	3.8e-37	N/A	unknown function
UniRef90	UHGV-0221609_3	UniRef90_A0A0B3VTI7	124.0	2e-34	N/A	N/A
eggNOG-mapper	UHGV-0221609_3	1414720.CBYM010000002_gene561	120.0	1.08e-33	N/A	N/A
Pfam	UHGV-0221609_3	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0221609_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_4	phrog_1535	182.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0221609_4	1121866.AUGK01000003_gene1437	285.0	0	phage tail tape measure protein	N/A
COG	UHGV-0221609_4	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0221609_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0221609_5	1121333.JMLH01000047_gene1011	50.8	0.00000182	N/A	N/A
UniRef90	UHGV-0221609_6	UniRef90_UPI0018999178	139.0	1.27e-40	N/A	N/A
eggNOG-mapper	UHGV-0221609_6	469596.HMPREF9488_01311	93.2	3.12e-23	N/A	N/A
Pfam	UHGV-0221609_6	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0221609_6	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_7	phrog_158	62.2	1e-17	major tail protein	tail
UniRef90	UHGV-0221609_7	UniRef90_A0A1C6L0H9	224.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0221609_7	1232453.BAIF02000058_gene1634	97.4	5.23e-24	N/A	N/A
Pfam	UHGV-0221609_7	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0221609_7	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0221609_8	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0221609_9	1298920.KI911353_gene2654	60.8	0.00000000358	N/A	N/A
eggNOG-mapper	UHGV-0221609_10	1298920.KI911353_gene2656	85.5	1.26e-19	N/A	N/A
UniRef90	UHGV-0221609_11	UniRef90_UPI001898B4B4	147.0	5.60519e-44	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0221609_11	1298920.KI911353_gene2658	56.2	0.00000000774	N/A	N/A
Pfam	UHGV-0221609_11	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0221609_11	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_12	phrog_1328	125.0	4.4e-37	major head protein	head and packaging
UniRef90	UHGV-0221609_12	UniRef90_UPI00164DD2D5	585.0	0	N/A	N/A
eggNOG-mapper	UHGV-0221609_12	665956.HMPREF1032_03619	226.0	0	N/A	N/A
Pfam	UHGV-0221609_12	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0221609_12	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_14	phrog_64	219.5	0	portal protein	head and packaging
UniRef90	UHGV-0221609_14	UniRef90_A0A6I2QXE1	692.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0221609_14	1123263.AUKY01000015_gene1609	422.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0221609_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0221609_14	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_15	phrog_38	150.0	1.4013e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0221609_15	UniRef90_A0A6I2QXZ5	883.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0221609_15	1298920.KI911353_gene2682	291.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0221609_15	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0221609_15	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0221609_15	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0221609_17	K14060	147.7	8.40779e-44	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0221609_17	phrog_125	189.4	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0221609_17	UniRef90_A6NXH6	232.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0221609_17	411467.BACCAP_02922	232.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0221609_17	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0221609_17	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0221609_17	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0221609_18	1232436.CAPF01000086_gene855	53.9	0.00000308	N/A	N/A
eggNOG-mapper	UHGV-0221609_20	397290.C810_01347	53.1	0.0000000132	N/A	N/A
structural_annotation	UHGV-0221609_20	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_21	phrog_6244	48.5	0.00000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0221609_21	1354300.AUQY01000005_gene215	113.0	7.32e-32	N/A	N/A
UniRef90	UHGV-0221609_22	UniRef90_UPI001D07B715	114.0	9.02e-29	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0221609_22	1235793.C809_00539	56.6	0.000000195	N/A	N/A
Pfam	UHGV-0221609_22	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0221609_22	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0221609_24	693746.OBV_18010	127.0	3.34e-35	N/A	N/A
structural_annotation	UHGV-0221609_24	TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0221609_28	PF04570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0221609_29	665956.HMPREF1032_00143	59.3	0.00000000798	N/A	N/A
structural_annotation	UHGV-0221609_29	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_33	phrog_22529	120.9	5.6e-36	N/A	unknown function
UniRef90	UHGV-0221609_33	UniRef90_A0A810Q1V0	285.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0221609_33	411463.EUBVEN_00667	106.0	3.08e-26	3D domain	N/A
Pfam	UHGV-0221609_33	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0221609_33	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0221609_33	PF06725,NF040670,COG3584	N/A	N/A	N/A	N/A
KOfam	UHGV-0221609_36	K01160	70.6	3.9e-20	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0221609_36	phrog_34	64.6	1.8e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0221609_36	UniRef90_UPI0018ABA1B6	149.0	1.03696e-43	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0221609_36	875454.BAEW01000002_gene491	109.0	3.47e-29	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0221609_36	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0221609_36	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0221609_36	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0221609_38	TIGR00122,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-0221609_40	K00558	161.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0221609_40	phrog_116	194.7	0	DNA methyltransferase	other
UniRef90	UHGV-0221609_40	UniRef90_A0A348AMX4	387.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0221609_40	871963.Desdi_1341	379.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0221609_40	oMTase_00004	205.1	0	orphan methyltransferase	RM
Pfam	UHGV-0221609_40	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0221609_40	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0221609_40	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0221609_41	K02315	125.1	7.4e-37	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0221609_41	phrog_50	123.3	2.4e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0221609_41	UniRef90_A0A810Q3X8	449.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0221609_41	445972.ANACOL_01829	186.0	0	N/A	N/A
Pfam	UHGV-0221609_41	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0221609_41	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0221609_41	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_42	phrog_15768	93.8	2.2e-27	N/A	unknown function
UniRef90	UHGV-0221609_42	UniRef90_A0A417QFV0	145.0	1.33e-39	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0221609_42	203119.Cthe_2466	169.0	0	N/A	N/A
structural_annotation	UHGV-0221609_42	PF01475,MF_01819,NF006999,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0221609_43	K03111	117.8	1.5e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0221609_43	phrog_44	118.9	4.2e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0221609_43	UniRef90_A0A810PUK9	242.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0221609_43	1203606.HMPREF1526_01880	109.0	6.37e-29	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0221609_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0221609_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0221609_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0221609_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0221609_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_44	phrog_72	48.5	0.000000000000034	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0221609_44	UniRef90_A0A8D9PDS2	269.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0221609_44	445972.ANACOL_01825	142.0	2.16e-40	N/A	N/A
structural_annotation	UHGV-0221609_44	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_45	phrog_434	44.1	0.0000000000028	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0221609_45	UniRef90_B0PAM4	159.0	0	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0221609_45	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0221609_46	UniRef90_A0A845QLQ8	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0221609_46	33035.JPJF01000135_gene5082	125.0	6.82e-33	N/A	N/A
Pfam	UHGV-0221609_46	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0221609_46	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_49	phrog_4433	168.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0221609_49	573061.Clocel_3578	128.0	8.83e-32	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0221609_49	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
UniRef90	UHGV-0221609_51	UniRef90_A0A8D9PDM8	73.6	7.05e-16	Pyocin activator protein	N/A
structural_annotation	UHGV-0221609_51	PF11112,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0221609_52	UniRef90_A0A810QCI5	58.2	0.00000000111	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0221609_52	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0221609_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0221609_52	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_53	phrog_5079	40.3	0.000000000046	N/A	unknown function
eggNOG-mapper	UHGV-0221609_54	476272.RUMHYD_01731	75.5	0.0000000000000229	N/A	N/A
structural_annotation	UHGV-0221609_54	PF13429,TIGR02552,COG0457	N/A	N/A	N/A	N/A
UniRef90	UHGV-0221609_55	UniRef90_A0A3D3Y0G5	92.8	1.5e-21	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0221609_55	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0221609_58	UniRef90_A0A8D9UHA6	158.0	1.4013e-45	Helix-turn-helix XRE-family like protein	N/A
structural_annotation	UHGV-0221609_58	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0221609_59	K14059	161.2	0	int; integrase	N/A
PHROG	UHGV-0221609_59	phrog_1	162.8	0	integrase	integration and excision
UniRef90	UHGV-0221609_59	UniRef90_A0A1C5W824	545.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0221609_59	445972.ANACOL_01797	295.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0221609_59	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0221609_59	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0221609_59	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0221609_60	UniRef90_A0A843GWV6	115.0	2.05e-31	Rubrerythrin domain-containing protein	N/A
structural_annotation	UHGV-0221609_61	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_62	phrog_16490	65.5	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0221609_62	476272.RUMHYD_01770	53.5	0.00000504	N/A	N/A
PHROG	UHGV-0221609_63	phrog_22984	50.6	0.000000000000034	N/A	unknown function
KOfam	UHGV-0221609_66	K01448	67.0	2.8e-19	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0221609_66	phrog_435	93.0	4e-27	endolysin	lysis
UniRef90	UHGV-0221609_66	UniRef90_A0A3D5TEB1	401.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0221609_66	697281.Mahau_0053	163.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0221609_66	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0221609_66	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0221609_66	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0221609_66	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_67	phrog_881	89.9	1.3e-26	holin	lysis
UniRef90	UHGV-0221609_67	UniRef90_UPI00189D3A4F	80.1	2.19e-18	phage holin	N/A
eggNOG-mapper	UHGV-0221609_67	742740.HMPREF9474_02251	78.6	1.66e-18	Putative phage holin Dp-1	N/A
Pfam	UHGV-0221609_67	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0221609_67	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0221609_68	phrog_1863	71.3	7.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0221609_68	718252.FP2_04900	113.0	5.78e-32	N/A	N/A
structural_annotation	UHGV-0221609_69	NF012201	N/A	N/A	N/A	N/A