UHGV-0224960 (vOTU-049246)

Viral Genome: UHGV-0224960

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0224960
vOTU ID	vOTU-049246
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR7495935_141_143194_round1256~340838
Associated BioSample	SAMN07688522
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9782
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.71
Jumbo phage	No

Genome content
Genome length (bp)	35,464
GC content	56.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	93%
Average CDS length (bps)	580.11
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0224960_1	phrog_104	100.1	2.2e-29	portal protein	head and packaging
UniRef90	UHGV-0224960_1	UniRef90_UPI001F23D011	134.0	3.14e-34	phage portal protein	N/A
eggNOG-mapper	UHGV-0224960_1	748224.HMPREF9436_01468	363.0	0	Phage portal protein, SPP1 Gp6-like	N/A
PHROG	UHGV-0224960_2	phrog_193	123.0	2.5e-36	head maturation protease	head and packaging
UniRef90	UHGV-0224960_2	UniRef90_A0A6N8H118	357.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0224960_2	748224.HMPREF9436_01469	401.0	0	N/A	N/A
COG	UHGV-0224960_2	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-0224960_4	phrog_194	82.4	7.4e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-0224960_4	UniRef90_D4K444	156.0	2.8026e-45	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0224960_4	748224.HMPREF9436_03336	159.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0224960_4	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0224960_4	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_5	phrog_10	142.0	5.29971e-42	major head protein	head and packaging
UniRef90	UHGV-0224960_5	UniRef90_A0A1Y4TJU9	514.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0224960_5	748224.HMPREF9436_00690	447.0	0	Phage capsid family	N/A
Pfam	UHGV-0224960_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0224960_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0224960_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0224960_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_7	phrog_137	55.5	7.8e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-0224960_7	UniRef90_E2ZGA8	161.0	0	Phage protein Gp19/Gp15/Gp42	N/A
structural_annotation	UHGV-0224960_7	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_8	phrog_501	73.2	3.6e-21	head closure Hc1	connector
eggNOG-mapper	UHGV-0224960_8	748224.HMPREF9436_00693	170.0	0	N/A	N/A
structural_annotation	UHGV-0224960_8	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_9	phrog_387	68.3	9.9e-20	neck protein	connector
UniRef90	UHGV-0224960_9	UniRef90_A0A380KNT4	73.6	0.00000000000000153	N/A	N/A
eggNOG-mapper	UHGV-0224960_9	1121864.OMO_02156	76.3	2.15e-17	N/A	N/A
PHROG	UHGV-0224960_10	phrog_123	70.6	2.5e-20	tail terminator	connector
UniRef90	UHGV-0224960_10	UniRef90_A0A139NAV0	116.0	1.24e-31	Phage-associated protein	N/A
eggNOG-mapper	UHGV-0224960_10	1280698.AUJS01000007_gene1043	119.0	1.26e-33	N/A	N/A
structural_annotation	UHGV-0224960_10	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_11	phrog_117	184.5	0	major tail protein	tail
UniRef90	UHGV-0224960_11	UniRef90_UPI00195F7CB7	266.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0224960_11	1280698.AUJS01000007_gene1044	237.0	0	domain, Protein	N/A
COG	UHGV-0224960_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0224960_11	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_12	phrog_1526	69.1	5.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0224960_12	1231377.C426_1729	60.5	0.0000000000641	N/A	N/A
PHROG	UHGV-0224960_13	phrog_1633	140.0	7.49975e-42	N/A	unknown function
UniRef90	UHGV-0224960_13	UniRef90_UPI001939D555	112.0	1.16e-29	N/A	N/A
eggNOG-mapper	UHGV-0224960_13	883110.HMPREF9260_00651	105.0	6.75e-28	N/A	N/A
Pfam	UHGV-0224960_13	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0224960_13	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_14	phrog_6900	266.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0224960_14	UniRef90_UPI001CC012E9	295.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0224960_14	1121864.OMO_02161	325.0	0	tape measure	N/A
COG	UHGV-0224960_14	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0224960_14	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_15	phrog_1194	41.8	0.000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0224960_15	411471.SUBVAR_06933	103.0	8.26e-27	N/A	N/A
structural_annotation	UHGV-0224960_15	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_16	phrog_18190	82.0	6.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0224960_16	411471.SUBVAR_06932	299.0	0	N/A	N/A
structural_annotation	UHGV-0224960_16	PF05954,PF00629,PF03424,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_17	phrog_18444	81.4	6.7e-24	N/A	unknown function
UniRef90	UHGV-0224960_17	UniRef90_UPI00156E9A45	55.5	0.00000000835	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0224960_17	1294142.CINTURNW_1707	60.1	0.0000000000209	N/A	N/A
structural_annotation	UHGV-0224960_19	PF12245	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0224960_20	428125.CLOLEP_01433	48.5	0.00000329	N/A	N/A
PHROG	UHGV-0224960_21	phrog_13589	184.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0224960_21	742733.HMPREF9469_05009	229.0	0	N/A	N/A
PHROG	UHGV-0224960_23	phrog_19111	61.3	8.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0224960_23	1232443.BAIA02000078_gene14	70.5	0.0000000000321	nuclear chromosome segregation	N/A
COG	UHGV-0224960_23	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0224960_24	phrog_24267	69.4	7.5e-20	N/A	unknown function
UniRef90	UHGV-0224960_24	UniRef90_G4Q8U0	61.2	0.000000133	Side tail fiber protein from lambdoid prophage Rac	N/A
eggNOG-mapper	UHGV-0224960_24	508419.F8J176_9CAUD	118.0	2.48e-27	peptidoglycan catabolic process	N/A
Pfam	UHGV-0224960_24	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
Pfam	UHGV-0224960_24	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
structural_annotation	UHGV-0224960_24	COG4675	N/A	N/A	N/A	N/A
KOfam	UHGV-0224960_25	K07273	179.1	0	acm; lysozyme	N/A
PHROG	UHGV-0224960_25	phrog_291	158.3	0	endolysin	lysis
UniRef90	UHGV-0224960_25	UniRef90_A0A367G061	521.0	0	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0224960_25	411471.SUBVAR_06927	312.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0224960_25	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0224960_25	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0224960_25	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0224960_25	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_26	phrog_1863	75.9	3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0224960_26	693746.OBV_18260	114.0	3.86e-32	N/A	N/A
PHROG	UHGV-0224960_27	phrog_1129	63.1	3.5e-18	holin	lysis
UniRef90	UHGV-0224960_27	UniRef90_A0A367FT42	168.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0224960_27	693746.OBV_13280	113.0	1.24e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0224960_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0224960_27	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0224960_28	K06400	362.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0224960_28	phrog_95	370.5	0	integrase	integration and excision
UniRef90	UHGV-0224960_28	UniRef90_UPI001D0F283A	615.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0224960_28	718252.FP2_01160	594.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0224960_28	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0224960_28	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0224960_28	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0224960_28	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0224960_28	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0224960_29	K07451	56.3	3.9e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0224960_29	phrog_589	57.1	3.3e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0224960_29	UniRef90_A0A7M2RF22	416.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0224960_29	386415.NT01CX_1757	350.0	0	HNH endonuclease	N/A
Pfam	UHGV-0224960_29	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0224960_29	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0224960_29	PF01844,NF040563,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_30	phrog_87	43.7	0.0000000000034	metallo-protease	other
UniRef90	UHGV-0224960_30	UniRef90_A0A329UQ57	209.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0224960_30	1007096.BAGW01000011_gene2354	74.7	0.00000000000000412	IrrE N-terminal-like domain	N/A
COG	UHGV-0224960_30	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0224960_30	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_31	phrog_8	61.0	2.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0224960_31	UniRef90_A0A372V3Y4	95.9	2.19e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0224960_31	411483.FAEPRAA2165_00756	96.7	2.12e-23	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0224960_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0224960_31	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0224960_31	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0224960_32	UniRef90_A0A372V3V8	89.0	4.91e-22	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-0224960_32	PF10078,NF040507,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_46	phrog_3584	204.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0224960_46	UniRef90_UPI001C02C5E0	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-0224960_46	525254.HMPREF0072_1311	160.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-0224960_46	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_47	phrog_36399	55.1	0.0000000000000017	N/A	unknown function
PHROG	UHGV-0224960_48	phrog_8470	280.4	0	N/A	unknown function
UniRef90	UHGV-0224960_48	UniRef90_UPI0019580896	191.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0224960_48	1226322.HMPREF1545_00100	198.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0224960_48	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0224960_48	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_49	phrog_625	58.5	9.3e-17	N/A	unknown function
UniRef90	UHGV-0224960_49	UniRef90_A0A7X9BRV5	90.5	2.05e-21	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0224960_49	397290.C810_01502	74.7	7.32e-16	N/A	N/A
structural_annotation	UHGV-0224960_49	PF12961,NF003443,COG2947	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_50	phrog_15609	75.5	3.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0224960_50	641112.ACOK01000073_gene2872	67.8	0.000000000294	N/A	N/A
structural_annotation	UHGV-0224960_50	PF11300,NF038070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0224960_53	693746.OBV_18010	76.3	0.00000000000000252	N/A	N/A
structural_annotation	UHGV-0224960_53	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_54	phrog_338	60.7	3.2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0224960_54	UniRef90_UPI0015F33F36	174.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0224960_54	748224.HMPREF9436_01465	175.0	0	N/A	N/A
PHROG	UHGV-0224960_55	phrog_1066	57.9	1.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0224960_55	445975.COLSTE_02166	76.6	5.61e-16	N/A	N/A
AcrCatalog	UHGV-0224960_55	cluster_154855	70.9	3.77e-18	NA	N/A
PHROG	UHGV-0224960_56	phrog_9	136.0	3.09999e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0224960_56	UniRef90_UPI001D0087E2	455.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0224960_56	1410630.JNKP01000001_gene1822	633.0	0	phage terminase, large subunit	N/A
COG	UHGV-0224960_56	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0224960_56	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0224960_57	phrog_104	88.7	5.3e-26	portal protein	head and packaging
UniRef90	UHGV-0224960_57	UniRef90_A0A3E2U200	383.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0224960_57	748224.HMPREF9436_01468	401.0	0	Phage portal protein, SPP1 Gp6-like	N/A