UHGV-0232092 (vOTU-001114)

Viral Genome: UHGV-0232092

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0232092
vOTU ID	vOTU-001114
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR5763455_141_124500_round347~3682988
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9813
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.23
Jumbo phage	No

Genome content
Genome length (bp)	42,525
GC content	49.68%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	94%
Average CDS length (bps)	730.53
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0232092_1	1410650.JHWL01000003_gene2831	68.9	0.000000000000416	N/A	N/A
PHROG	UHGV-0232092_2	phrog_1357	261.8	0	major head protein	head and packaging
UniRef90	UHGV-0232092_2	UniRef90_A0A7G9GB60	472.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0232092_2	1410650.JHWL01000003_gene2830	450.0	0	N/A	N/A
Pfam	UHGV-0232092_2	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0232092_2	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0232092_2	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_3	phrog_15239	55.3	0.0000000000000011	N/A	unknown function
PHROG	UHGV-0232092_4	phrog_12105	76.8	2.4e-22	N/A	unknown function
PHROG	UHGV-0232092_5	phrog_511	172.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0232092_5	1410650.JHWL01000003_gene2827	580.0	0	N/A	N/A
structural_annotation	UHGV-0232092_5	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_7	phrog_11393	40.1	0.000000000037	tail fiber protein	tail
COG	UHGV-0232092_7	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0232092_9	NF040910	N/A	N/A	N/A	N/A
COG	UHGV-0232092_11	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
eggNOG-mapper	UHGV-0232092_12	1410650.JHWL01000003_gene2815	218.0	0	N/A	N/A
PHROG	UHGV-0232092_13	phrog_22978	538.9	0	N/A	unknown function
UniRef90	UHGV-0232092_13	UniRef90_A0A416JVP5	739.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0232092_13	1410650.JHWL01000003_gene2814	946.0	0	N/A	N/A
Pfam	UHGV-0232092_13	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
UniRef90	UHGV-0232092_14	UniRef90_UPI00047BE855	174.0	0	BppU family phage baseplate upper protein	N/A
PHROG	UHGV-0232092_17	phrog_6918	73.1	3.1e-21	holin	lysis
UniRef90	UHGV-0232092_17	UniRef90_R7N9M5	83.2	2.88e-18	LL-H family phage holin	N/A
eggNOG-mapper	UHGV-0232092_17	1235792.C808_00574	72.4	0.00000000000000725	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0232092_17	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0232092_17	PF09682,TIGR01673	N/A	N/A	N/A	N/A
KOfam	UHGV-0232092_18	K21471	41.5	0.000000000026	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0232092_18	phrog_14030	176.3	0	N/A	unknown function
UniRef90	UHGV-0232092_18	UniRef90_A0A0D0SGD3	205.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0232092_18	457412.RSAG_02810	197.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0232092_18	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0232092_18	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0232092_18	PF05382,PF08230,NF033742	N/A	N/A	N/A	N/A
UniRef90	UHGV-0232092_19	UniRef90_R6GNZ5	100.0	9.71e-23	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0232092_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0232092_19	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_21	phrog_16490	54.2	0.000000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0232092_21	641112.ACOK01000103_gene525	119.0	9.59e-31	N/A	N/A
COG	UHGV-0232092_22	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-0232092_22	PF18573,NF033147	N/A	N/A	N/A	N/A
Pfam	UHGV-0232092_23	PF02915	N/A	N/A	Rubrerythrin	Rubrerythrin
KOfam	UHGV-0232092_25	K14059	151.4	9.80909e-45	int; integrase	N/A
PHROG	UHGV-0232092_25	phrog_1	144.0	1.3004e-42	integrase	integration and excision
UniRef90	UHGV-0232092_25	UniRef90_A0A355NK33	255.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0232092_25	887325.HMPREF0381_0346	251.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0232092_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0232092_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0232092_25	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0232092_28	K22300	51.3	0.000000000000023	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0232092_28	phrog_8	63.0	7.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0232092_28	UniRef90_D1AGN9	93.6	2.06e-22	Transcriptional regulator, XRE family	N/A
eggNOG-mapper	UHGV-0232092_28	526218.Sterm_3926	93.6	3.45e-23	sequence-specific DNA binding	N/A
Pfam	UHGV-0232092_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0232092_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0232092_28	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0232092_29	UniRef90_UPI0008894789	79.7	5.89e-18	N/A	N/A
eggNOG-mapper	UHGV-0232092_29	526218.Sterm_3925	65.1	0.000000000000551	N/A	N/A
PHROG	UHGV-0232092_35	phrog_253	174.9	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0232092_35	UniRef90_UPI00188A68AB	149.0	3.47522e-43	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0232092_35	1410650.JHWL01000003_gene2853	124.0	2.3e-34	Siphovirus Gp157	N/A
Pfam	UHGV-0232092_35	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0232092_35	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_36	phrog_14970	214.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0232092_36	411468.CLOSCI_00315	186.0	0	double-strand break repair protein	N/A
COG	UHGV-0232092_36	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0232092_36	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_37	phrog_72	44.2	0.0000000000035	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0232092_37	1410650.JHWL01000003_gene2850	86.3	9.14e-19	N/A	N/A
eggNOG-mapper	UHGV-0232092_38	457412.RSAG_00329	67.0	0.000000000000373	N/A	N/A
PHROG	UHGV-0232092_39	phrog_15768	64.6	1.2e-18	N/A	unknown function
UniRef90	UHGV-0232092_39	UniRef90_A0A3R6FIK8	67.8	0.000000000518	N/A	N/A
eggNOG-mapper	UHGV-0232092_39	888059.HMPREF9071_2037	70.1	0.00000000000139	N/A	N/A
Pfam	UHGV-0232092_39	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0232092_39	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_41	phrog_7566	61.2	1.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0232092_41	742740.HMPREF9474_04319	71.2	0.00000000000000319	N/A	N/A
KOfam	UHGV-0232092_42	K00390	79.5	1.4e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0232092_42	phrog_424	111.7	5.8e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0232092_42	UniRef90_UPI001D060E45	282.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0232092_42	1408324.JNJK01000014_gene2016	300.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0232092_42	BrxP_00001	49.9	3.4e-27	BrxP	BREX
Pfam	UHGV-0232092_42	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0232092_42	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0232092_42	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_43	phrog_757	62.2	5.9e-18	DNA methyltransferase	other
eggNOG-mapper	UHGV-0232092_43	428127.EUBDOL_01513	296.0	0	N/A	N/A
AcrCatalog	UHGV-0232092_43	cluster_47493	182.0	0	NA	N/A
structural_annotation	UHGV-0232092_43	PF00145,MF_00341,COG0270	N/A	N/A	N/A	N/A
Pfam	UHGV-0232092_45	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0232092_47	phrog_774	64.7	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0232092_47	397290.C810_05225	65.1	0.00000000000099	N/A	N/A
UniRef90	UHGV-0232092_48	UniRef90_UPI001D0AA218	61.6	0.0000000123	N/A	N/A
eggNOG-mapper	UHGV-0232092_48	411473.RUMCAL_00360	59.3	0.00000000222	N/A	N/A
structural_annotation	UHGV-0232092_48	PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0232092_49	K03111	125.1	9.3e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0232092_49	phrog_44	124.2	1.2e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0232092_49	UniRef90_UPI000423A315	214.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0232092_49	1280685.AUKC01000081_gene1299	214.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0232092_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0232092_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0232092_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0232092_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0232092_49	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0232092_51	K07474	70.9	3.9e-20	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0232092_51	phrog_51	69.5	6.9e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0232092_51	UniRef90_UPI001D0743BF	74.7	0.000000000000121	terminase small subunit	N/A
eggNOG-mapper	UHGV-0232092_51	1123518.ARWI01000001_gene1821	63.5	0.0000000000944	DNA packaging	N/A
Pfam	UHGV-0232092_51	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0232092_51	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0232092_52	K06909	126.1	3.4e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0232092_52	phrog_979	127.0	6.2e-39	terminase large subunit	head and packaging
UniRef90	UHGV-0232092_52	UniRef90_UPI0010311CEE	678.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0232092_52	1410650.JHWL01000003_gene2834	647.0	0	N/A	N/A
Pfam	UHGV-0232092_52	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0232092_52	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0232092_52	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_53	phrog_156	318.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0232092_53	1410650.JHWL01000003_gene2833	886.0	0	N/A	N/A
structural_annotation	UHGV-0232092_53	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0232092_54	K07584	56.2	7.1e-16	N/A	N/A
PHROG	UHGV-0232092_54	phrog_4478	64.4	1.4e-18	peptidase	other
UniRef90	UHGV-0232092_54	UniRef90_UPI0005504E05	102.0	4.57e-26	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0232092_54	926561.KB900617_gene1817	52.8	0.000000237	Cysteine protease Prp	N/A
Pfam	UHGV-0232092_54	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0232092_54	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0232092_54	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0232092_55	phrog_13908	149.9	1.54143e-44	N/A	unknown function
eggNOG-mapper	UHGV-0232092_55	1410650.JHWL01000003_gene2831	207.0	0	N/A	N/A