UHGV-0239353 (vOTU-153992)

Viral Genome: UHGV-0239353

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0239353
vOTU ID	vOTU-153992
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR10762431_141_87830_round1256~2102533
Associated BioSample	SAMN13673907
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.35 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.78
Jumbo phage	No

Genome content
Genome length (bp)	37,408
GC content	45.46%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	62
CDS density	90%
Average CDS length (bps)	544.84
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0239353_3	1298920.KI911353_gene541	72.4	0.00000000000358	ATPase involved in DNA repair	N/A
COG	UHGV-0239353_3	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0239353_3	PF03425,NF033675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0239353_4	1298920.KI911353_gene541	70.5	0.000000000000509	ATPase involved in DNA repair	N/A
COG	UHGV-0239353_4	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-0239353_5	411902.CLOBOL_00122	138.0	6.72e-40	N/A	N/A
PHROG	UHGV-0239353_6	phrog_18725	63.3	4.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0239353_6	411902.CLOBOL_00123	123.0	4.84e-34	N/A	N/A
PHROG	UHGV-0239353_7	phrog_32744	165.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0239353_7	411902.CLOBOL_00124	450.0	0	N/A	N/A
structural_annotation	UHGV-0239353_7	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_8	phrog_1194	63.3	3.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0239353_8	411902.CLOBOL_00125	129.0	5.86e-37	N/A	N/A
structural_annotation	UHGV-0239353_8	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_9	phrog_37543	704.2	0	N/A	unknown function
UniRef90	UHGV-0239353_9	UniRef90_A0A1C6CG40	285.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0239353_9	411459.RUMOBE_01384	226.0	0	phage tail tape measure protein	N/A
COG	UHGV-0239353_9	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0239353_10	phrog_706	138.8	3.39997e-41	N/A	unknown function
UniRef90	UHGV-0239353_10	UniRef90_A0A1I0K8S4	202.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0239353_10	33035.JPJF01000106_gene3124	180.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0239353_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0239353_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_11	phrog_11299	98.7	5.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0239353_11	411459.RUMOBE_01382	102.0	9.54e-26	N/A	N/A
structural_annotation	UHGV-0239353_11	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_12	phrog_3099	105.1	7e-31	N/A	unknown function
eggNOG-mapper	UHGV-0239353_12	476272.RUMHYD_01782	159.0	0	N/A	N/A
structural_annotation	UHGV-0239353_12	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_13	phrog_3266	93.3	2.1e-27	tail completion	connector
eggNOG-mapper	UHGV-0239353_13	476272.RUMHYD_01781	141.0	1.34001e-40	N/A	N/A
structural_annotation	UHGV-0239353_13	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_14	phrog_556	75.0	7.9e-22	minor head protein	head and packaging
UniRef90	UHGV-0239353_14	UniRef90_UPI000E4989EB	198.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0239353_14	476272.RUMHYD_01780	169.0	0	N/A	N/A
Pfam	UHGV-0239353_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0239353_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_15	phrog_3366	90.3	2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0239353_15	476272.RUMHYD_01779	152.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0239353_15	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_16	phrog_8680	232.9	0	N/A	unknown function
UniRef90	UHGV-0239353_16	UniRef90_UPI001C0F342A	282.0	0	N/A	N/A
eggNOG-mapper	UHGV-0239353_16	411470.RUMGNA_02208	253.0	0	N/A	N/A
Pfam	UHGV-0239353_16	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0239353_16	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_17	phrog_18218	141.6	1.99965e-42	N/A	unknown function
UniRef90	UHGV-0239353_17	UniRef90_A0A8D9PGR5	154.0	0	Holin	N/A
eggNOG-mapper	UHGV-0239353_17	411902.CLOBOL_03424	80.9	2.53e-18	N/A	N/A
structural_annotation	UHGV-0239353_17	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_18	phrog_355	54.0	0.0000000000000028	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0239353_18	UniRef90_A0A415G5B2	175.0	0	N/A	N/A
eggNOG-mapper	UHGV-0239353_18	397290.C810_05229	176.0	0	N/A	N/A
structural_annotation	UHGV-0239353_18	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_20	phrog_541	97.2	1.3e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0239353_20	476272.RUMHYD_01778	125.0	2.63e-34	N/A	N/A
PHROG	UHGV-0239353_21	phrog_544	157.2	0	major head protein	head and packaging
UniRef90	UHGV-0239353_21	UniRef90_A0A395X7A1	597.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0239353_21	1232453.BAIF02000011_gene3359	380.0	0	N/A	N/A
Pfam	UHGV-0239353_21	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0239353_21	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_22	phrog_194	70.5	3.4e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-0239353_22	UniRef90_UPI001D14C9C8	171.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0239353_22	476272.RUMHYD_01775	176.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0239353_22	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0239353_22	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_24	phrog_28802	234.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0239353_24	476272.RUMHYD_01772	201.0	0	N/A	N/A
PHROG	UHGV-0239353_25	phrog_20016	192.7	0	N/A	unknown function
UniRef90	UHGV-0239353_25	UniRef90_A0A285PT46	156.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0239353_25	397290.C810_05214	176.0	0	N/A	N/A
structural_annotation	UHGV-0239353_25	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_26	phrog_16490	186.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0239353_26	397290.C810_01328	173.0	0	N/A	N/A
PHROG	UHGV-0239353_27	phrog_59	146.1	1.20512e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0239353_27	UniRef90_A0A1X7JTX1	133.0	4.29e-36	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0239353_27	1206110.L0P6F5_9CAUD	133.0	1.5e-36	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0239353_27	HEase_00016	110.5	2.6e-32	homing endonuclease	RM
Pfam	UHGV-0239353_27	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0239353_27	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0239353_27	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_28	phrog_22984	87.9	5e-26	N/A	unknown function
PHROG	UHGV-0239353_29	phrog_21718	133.2	1.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0239353_29	397290.C810_05210	131.0	1.16e-36	N/A	N/A
PHROG	UHGV-0239353_30	phrog_4105	112.8	1.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-0239353_30	657322.FPR_27220	102.0	1.29e-26	N/A	N/A
PHROG	UHGV-0239353_31	phrog_3754	120.5	1.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0239353_31	476272.RUMHYD_01764	179.0	0	N/A	N/A
PHROG	UHGV-0239353_32	phrog_581	229.9	0	minor head protein	head and packaging
UniRef90	UHGV-0239353_32	UniRef90_A0A1C6CDG2	476.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0239353_32	33035.JPJF01000106_gene3134	377.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0239353_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0239353_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0239353_32	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0239353_33	UniRef90_R7NA43	62.8	0.0000000000134	ATP synthase B chain	N/A
UniRef90	UHGV-0239353_34	UniRef90_A0A6L5T7F3	261.0	0	N/A	N/A
eggNOG-mapper	UHGV-0239353_34	1235800.C819_00472	134.0	7.94e-33	N/A	N/A
Pfam	UHGV-0239353_34	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0239353_34	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_35	phrog_14030	159.4	0	N/A	unknown function
UniRef90	UHGV-0239353_35	UniRef90_UPI001F3A7341	283.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0239353_35	411468.CLOSCI_01513	237.0	0	N/A	N/A
Pfam	UHGV-0239353_35	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-0239353_35	PF19127	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_36	phrog_533	285.3	0	portal protein	head and packaging
UniRef90	UHGV-0239353_36	UniRef90_A0A1C6CDM8	689.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0239353_36	33035.JPJF01000106_gene3135	502.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0239353_36	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0239353_38	PF20384,TIGR02608	N/A	N/A	N/A	N/A
KOfam	UHGV-0239353_39	K06909	328.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0239353_39	phrog_3717	159.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0239353_39	UniRef90_A0A395X9V4	792.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0239353_39	397291.C804_01612	411.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0239353_39	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0239353_39	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0239353_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0239353_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0239353_39	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_40	phrog_606	88.2	1e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0239353_40	UniRef90_UPI00195648BB	171.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0239353_40	397290.C810_05185	178.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0239353_40	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0239353_40	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0239353_43	K04763	159.0	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0239353_43	phrog_1	132.5	4.2e-39	integrase	integration and excision
UniRef90	UHGV-0239353_43	UniRef90_A0A0F0C3Y7	449.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0239353_43	1298920.KI911353_gene2699	367.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0239353_43	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0239353_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0239353_43	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0239353_43	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0239353_44	cluster_11670	50.8	0.000000000036	NA	N/A
UniRef90	UHGV-0239353_46	UniRef90_A0A3R6V2Q9	109.0	1.58e-30	CopG family transcriptional regulator	N/A
Pfam	UHGV-0239353_46	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0239353_46	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-0239353_49	UniRef90_A0A395WBY6	78.6	0.00000000000000295	N/A	N/A
Pfam	UHGV-0239353_49	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0239353_50	PF18350,MF_00754,NF003018	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_51	phrog_15768	102.8	1.2e-37	N/A	unknown function
UniRef90	UHGV-0239353_51	UniRef90_R6RVQ1	197.0	0	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0239353_51	1095750.HMPREF9970_1674	71.2	0.00000000000595	N/A	N/A
AcrCatalog	UHGV-0239353_51	cluster_14472	155.0	0	NA	N/A
Pfam	UHGV-0239353_51	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0239353_51	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_52	phrog_244	69.7	6.3e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0239353_52	742740.HMPREF9474_03491	183.0	0	N/A	N/A
structural_annotation	UHGV-0239353_52	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_53	phrog_2113	58.1	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0239353_53	1160721.RBI_II00485	53.5	0.000000121	N/A	N/A
structural_annotation	UHGV-0239353_53	PF21715,TIGR04176,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_54	phrog_7566	86.9	1.6e-25	N/A	unknown function
UniRef90	UHGV-0239353_54	UniRef90_A0A414AP32	169.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0239353_54	1304866.K413DRAFT_1198	60.8	0.0000000000918	N/A	N/A
PHROG	UHGV-0239353_55	phrog_72	63.9	2.6e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0239353_55	411468.CLOSCI_00314	137.0	1.91e-38	N/A	N/A
structural_annotation	UHGV-0239353_55	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_56	phrog_14970	298.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0239353_56	411470.RUMGNA_02193	236.0	0	double-strand break repair protein	N/A
COG	UHGV-0239353_56	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0239353_56	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0239353_57	phrog_253	110.8	1.3e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0239353_57	UniRef90_A0A1C6CBG4	177.0	0	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0239353_57	411470.RUMGNA_02192	133.0	1.41e-37	Siphovirus Gp157	N/A
Pfam	UHGV-0239353_57	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0239353_57	PF05565	N/A	N/A	N/A	N/A