UHGV-0240576 (vOTU-150546)

Viral Genome: UHGV-0240576

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0240576
vOTU ID	vOTU-150546
Representative Genome?	Yes
Source	mMGE
Original genome ID	DRR171470_141_70790_round13~9496304
Associated BioSample	SAMD00164734
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	75.22 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	20.82
Jumbo phage	No

Genome content
Genome length (bp)	39,200
GC content	49.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	69
CDS density	91%
Average CDS length (bps)	514.35
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 75.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0240576_1	658655.HMPREF0988_00916	60.1	0.0000000000533	N/A	N/A
PHROG	UHGV-0240576_2	phrog_16490	262.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0240576_2	1408437.JNJN01000043_gene803	279.0	0	N/A	N/A
eggNOG-mapper	UHGV-0240576_4	445972.ANACOL_01878	57.8	0.0000000256	N/A	N/A
PHROG	UHGV-0240576_6	phrog_1281	116.1	2.2e-34	N/A	unknown function
UniRef90	UHGV-0240576_6	UniRef90_A0A0W7TLZ5	230.0	0	N/A	N/A
eggNOG-mapper	UHGV-0240576_6	1235798.C817_03619	226.0	0	N/A	N/A
Pfam	UHGV-0240576_6	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0240576_6	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0240576_6	PF13274,COG3600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0240576_7	1235798.C817_03620	163.0	0	N/A	N/A
UniRef90	UHGV-0240576_8	UniRef90_U2R3E6	63.2	0.0000000000193	KORA domain-containing protein	N/A
structural_annotation	UHGV-0240576_8	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_9	phrog_21825	114.1	1.3e-33	endolysin	lysis
UniRef90	UHGV-0240576_9	UniRef90_A0A1C5WDQ0	426.0	0	CHAP domain	N/A
eggNOG-mapper	UHGV-0240576_9	693746.OBV_18290	206.0	0	CHAP domain	N/A
Pfam	UHGV-0240576_9	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0240576_9	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
PHROG	UHGV-0240576_10	phrog_13256	74.8	6.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0240576_10	1226322.HMPREF1545_00132	88.6	2.64e-22	N/A	N/A
PHROG	UHGV-0240576_11	phrog_23092	158.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0240576_11	1226322.HMPREF1545_02799	145.0	9.10844e-44	N/A	N/A
PHROG	UHGV-0240576_12	phrog_937	67.7	1.2e-19	hemolysin	other
eggNOG-mapper	UHGV-0240576_12	1226322.HMPREF1545_00067	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-0240576_13	1203606.HMPREF1526_01926	57.0	0.000000142	N/A	N/A
PHROG	UHGV-0240576_14	phrog_4628	46.0	0.0000000000011	tail fiber assembly	tail
eggNOG-mapper	UHGV-0240576_14	1226322.HMPREF1545_00128	99.4	1.11e-25	N/A	N/A
UniRef90	UHGV-0240576_15	UniRef90_A0A4D7AHL6	269.0	0	Collagen-like protein	N/A
eggNOG-mapper	UHGV-0240576_15	1226322.HMPREF1545_00064	68.6	0.00000000058	N/A	N/A
structural_annotation	UHGV-0240576_15	PF18459	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_16	phrog_32744	965.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0240576_16	1120998.AUFC01000030_gene2247	221.0	0	N/A	N/A
structural_annotation	UHGV-0240576_16	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_17	phrog_1194	65.6	7.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0240576_17	394503.Ccel_3034	73.6	0.00000000000000346	N/A	N/A
structural_annotation	UHGV-0240576_17	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_18	phrog_1535	113.1	2.4e-33	tail length tape measure protein	tail
UniRef90	UHGV-0240576_18	UniRef90_A0A1C6L0H4	260.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0240576_18	1121866.AUGK01000003_gene1437	202.0	0	phage tail tape measure protein	N/A
COG	UHGV-0240576_18	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
UniRef90	UHGV-0240576_21	UniRef90_A0A845R9E6	134.0	4.88e-38	N/A	N/A
Pfam	UHGV-0240576_21	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0240576_21	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_22	phrog_158	43.7	0.0000000000044	major tail protein	tail
eggNOG-mapper	UHGV-0240576_22	1121333.JMLH01000047_gene1013	173.0	0	N/A	N/A
structural_annotation	UHGV-0240576_22	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0240576_23	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_24	phrog_5	42.4	0.000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-0240576_24	UniRef90_A0A7C7ERK4	141.0	6.59e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0240576_24	397290.C810_01411	105.0	1.85e-26	N/A	N/A
structural_annotation	UHGV-0240576_24	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_25	phrog_1233	82.6	5.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0240576_25	1232443.BAIA02000078_gene33	159.0	0	N/A	N/A
UniRef90	UHGV-0240576_26	UniRef90_A0A845R6M6	146.0	7.9874e-44	DNA-packaging protein	N/A
structural_annotation	UHGV-0240576_26	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0240576_28	1226322.HMPREF1545_00051	175.0	0	N/A	N/A
PHROG	UHGV-0240576_29	phrog_29	198.1	0	major head protein	head and packaging
UniRef90	UHGV-0240576_29	UniRef90_A0A7X5DZ98	566.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0240576_29	1347368.HG964404_gene4993	294.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0240576_29	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0240576_29	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_30	phrog_909	45.3	0.0000000000012	major head protein	head and packaging
PHROG	UHGV-0240576_32	phrog_115	42.6	0.0000000000098	minor head protein	head and packaging
UniRef90	UHGV-0240576_32	UniRef90_A0A1C5WCC8	389.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
PHROG	UHGV-0240576_33	phrog_23707	89.5	4e-26	N/A	unknown function
UniRef90	UHGV-0240576_33	UniRef90_A0A1Q6KU34	110.0	3.54e-28	N/A	N/A
eggNOG-mapper	UHGV-0240576_33	411470.RUMGNA_00214	108.0	4.73e-28	N/A	N/A
structural_annotation	UHGV-0240576_33	PF08325,COG4900	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_34	phrog_64	206.2	0	portal protein	head and packaging
UniRef90	UHGV-0240576_34	UniRef90_A0A845RCM8	539.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0240576_34	1123263.AUKY01000015_gene1609	367.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0240576_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0240576_34	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0240576_35	COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_36	phrog_38	164.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0240576_36	UniRef90_A0A810QA10	847.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0240576_36	1298920.KI911353_gene2682	386.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0240576_36	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0240576_36	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0240576_36	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-0240576_37	K14415	325.5	0	RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]	N/A
PHROG	UHGV-0240576_37	phrog_1075	472.4	0	tRNA splicing ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0240576_37	UniRef90_A0A1C5WBR5	797.0	0	RNA-splicing ligase RtcB	N/A
eggNOG-mapper	UHGV-0240576_37	1232443.BAIA02000103_gene2968	579.0	0	tRNA-splicing ligase RtcB	N/A
Pfam	UHGV-0240576_37	PF01139	N/A	N/A	tRNA-splicing ligase RtcB	RtcB
COG	UHGV-0240576_37	COG1690	N/A	N/A	RNA-splicing ligase RtcB, repairs tRNA damage	N/A
structural_annotation	UHGV-0240576_37	PF01139,MF_03144,NF007153,COG1690	N/A	N/A	N/A	N/A
UniRef90	UHGV-0240576_38	UniRef90_A0A3D5L5C3	72.8	9.25e-16	Cytochrome C	N/A
eggNOG-mapper	UHGV-0240576_38	1200567.JNKD01000039_gene220	63.2	0.00000000000106	N/A	N/A
UniRef90	UHGV-0240576_39	UniRef90_A0A810QB23	77.8	3.4e-17	N/A	N/A
Pfam	UHGV-0240576_39	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0240576_39	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_40	phrog_374	58.2	1.3e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0240576_40	742738.HMPREF9460_04058	223.0	0	N/A	N/A
structural_annotation	UHGV-0240576_40	PF10013,COG4338	N/A	N/A	N/A	N/A
COG	UHGV-0240576_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0240576_49	UniRef90_A0A0F0C267	87.8	1.12e-17	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0240576_49	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_50	phrog_12588	77.0	1.8e-22	N/A	unknown function
PHROG	UHGV-0240576_54	phrog_22543	43.8	0.00000000000025	N/A	unknown function
PHROG	UHGV-0240576_55	phrog_7711	148.9	1.4013e-44	N/A	unknown function
eggNOG-mapper	UHGV-0240576_55	1226322.HMPREF1545_00031	243.0	0	N/A	N/A
PHROG	UHGV-0240576_56	phrog_38832	181.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0240576_56	665956.HMPREF1032_03087	105.0	7.67e-27	N/A	N/A
PHROG	UHGV-0240576_61	phrog_1384	130.1	1.4e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0240576_61	428125.CLOLEP_01816	289.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0240576_61	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_65	phrog_10714	52.4	0.000000000000007	N/A	unknown function
UniRef90	UHGV-0240576_65	UniRef90_UPI001C3A10B1	72.0	0.0000000000000722	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0240576_65	1226322.HMPREF1545_00023	57.8	0.00000000516	N/A	N/A
structural_annotation	UHGV-0240576_67	PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_68	phrog_599	41.9	0.000000000019	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0240576_68	UniRef90_A0A4D7ANR2	181.0	0	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0240576_68	742738.HMPREF9460_04054	76.6	5.06e-17	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0240576_68	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0240576_68	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0240576_69	phrog_1008	110.8	7.8e-33	DNA methyltransferase	other
UniRef90	UHGV-0240576_69	UniRef90_A0A345KQM6	163.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0240576_69	1235835.C814_01160	182.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0240576_69	COG0270	N/A	N/A	DNA-cytosine methylase	N/A