UHGV-0249414 (vOTU-049577)

Viral Genome: UHGV-0249414

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0249414
vOTU ID	vOTU-049577
Representative Genome?	Yes
Source	mMGE
Original genome ID	k119_196671_round1256~4907006
Associated BioSample	SAMEA4588109
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.98
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.9
Jumbo phage	No

Genome content
Genome length (bp)	43,797
GC content	45.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	62
CDS density	92%
Average CDS length (bps)	646.60
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0249414_2	K06909	144.7	7.80523e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0249414_2	phrog_979	151.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0249414_2	UniRef90_UPI001CF909A5	587.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0249414_2	1410650.JHWL01000003_gene2834	582.0	0	N/A	N/A
Pfam	UHGV-0249414_2	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0249414_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0249414_2	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_3	phrog_156	315.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0249414_3	748224.HMPREF9436_01396	410.0	0	N/A	N/A
structural_annotation	UHGV-0249414_3	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_5	phrog_13908	179.6	0	N/A	unknown function
UniRef90	UHGV-0249414_5	UniRef90_A0A174CZ20	82.4	0.0000000000000645	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-0249414_5	1410650.JHWL01000003_gene2831	89.7	1.09e-17	N/A	N/A
PHROG	UHGV-0249414_6	phrog_1357	254.3	0	major head protein	head and packaging
UniRef90	UHGV-0249414_6	UniRef90_UPI001CF8B373	366.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0249414_6	748224.HMPREF9436_01399	302.0	0	N/A	N/A
Pfam	UHGV-0249414_6	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0249414_6	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0249414_6	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_7	phrog_15239	43.9	0.0000000000021	N/A	unknown function
PHROG	UHGV-0249414_8	phrog_12105	66.2	4.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0249414_8	1226322.HMPREF1545_03850	64.3	0.0000000000158	N/A	N/A
PHROG	UHGV-0249414_9	phrog_511	188.8	0	internal virion protein	head and packaging
UniRef90	UHGV-0249414_9	UniRef90_A0A348ZD54	152.0	7.1e-35	Dockerin domain-containing protein	N/A
eggNOG-mapper	UHGV-0249414_9	1321782.HMPREF1986_00351	198.0	0	N/A	N/A
structural_annotation	UHGV-0249414_9	PF11134,MF_03037,TIGR03300,NF033675,COG3292	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_11	phrog_24103	74.6	1.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0249414_11	1118055.CAGU01000013_gene761	53.9	0.00000715	N/A	N/A
PHROG	UHGV-0249414_12	phrog_6465	67.2	3.1e-19	tail protein	tail
UniRef90	UHGV-0249414_12	UniRef90_A2GKJ6	69.3	0.0000000000326	Phage associate minor structural protein, putative	N/A
eggNOG-mapper	UHGV-0249414_12	1410624.JNKK01000017_gene1989	133.0	1.96e-34	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-0249414_12	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0249414_12	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_14	phrog_25468	56.7	9.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0249414_14	764299.STRIC_1424	56.2	0.00000476	tail collar domain protein	N/A
COG	UHGV-0249414_14	COG4675	N/A	N/A	Phage tail collar domain	N/A
eggNOG-mapper	UHGV-0249414_15	657322.FPR_21890	55.5	0.0000000529	N/A	N/A
PHROG	UHGV-0249414_16	phrog_1129	67.5	1.3e-19	holin	lysis
UniRef90	UHGV-0249414_16	UniRef90_A0A2S0L5I2	95.9	2.4e-23	Holin	N/A
eggNOG-mapper	UHGV-0249414_16	1158601.I585_01143	69.7	0.0000000000000411	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0249414_16	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0249414_16	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0249414_17	K01448	95.3	7.6e-28	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0249414_17	phrog_435	127.1	1.8e-37	endolysin	lysis
UniRef90	UHGV-0249414_17	UniRef90_A0A6N7X525	260.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0249414_17	1392487.JIAD01000001_gene506	204.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0249414_17	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0249414_17	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0249414_17	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0249414_18	411469.EUBHAL_00974	70.1	0.0000000000539	CHAP domain	N/A
COG	UHGV-0249414_18	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0249414_18	PF18341,NF040678,COG4991	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0249414_19	1203606.HMPREF1526_02741	60.5	0.0000000648	N/A	N/A
KOfam	UHGV-0249414_20	K19304	152.7	2.8026e-45	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0249414_20	phrog_22978	358.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0249414_20	748449.Halha_1635	138.0	4.86e-32	Peptidase family M23	N/A
Pfam	UHGV-0249414_20	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0249414_20	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0249414_21	PF07638,MF_00674,TIGR02954,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_22	phrog_21718	52.5	0.0000000000000082	N/A	unknown function
eggNOG-mapper	UHGV-0249414_22	397290.C810_05210	63.5	0.0000000000408	N/A	N/A
eggNOG-mapper	UHGV-0249414_24	476272.RUMHYD_01770	94.0	4.25e-21	N/A	N/A
structural_annotation	UHGV-0249414_25	PF18573,NF033147	N/A	N/A	N/A	N/A
Pfam	UHGV-0249414_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0249414_27	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0249414_27	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0249414_28	K14059	206.0	0	int; integrase	N/A
PHROG	UHGV-0249414_28	phrog_1	175.6	0	integrase	integration and excision
UniRef90	UHGV-0249414_28	UniRef90_A0A7Y9B158	292.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0249414_28	936375.HMPREF1152_0651	284.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0249414_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0249414_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0249414_28	PF00589,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0249414_29	K22300	47.8	0.00000000000034	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0249414_29	phrog_8	55.9	0.0000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0249414_29	UniRef90_D6KLD1	78.2	4.52e-16	Toxin-antitoxin system, antitoxin component, Xre family	N/A
eggNOG-mapper	UHGV-0249414_29	478749.BRYFOR_07570	76.3	0.00000000000000165	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0249414_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0249414_29	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0249414_29	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0249414_30	UniRef90_A0A373V5W6	50.4	0.00000148	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0249414_30	1298920.KI911353_gene527	55.8	0.00000000314	N/A	N/A
structural_annotation	UHGV-0249414_30	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0249414_31	UniRef90_A0A1G7ADU2	47.8	0.0000073	DNA binding domain-containing protein, excisionase family	N/A
Pfam	UHGV-0249414_31	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0249414_31	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0249414_31	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-0249414_31	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249414_33	PF04347	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_36	phrog_14970	262.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0249414_36	411468.CLOSCI_00315	221.0	0	double-strand break repair protein	N/A
COG	UHGV-0249414_36	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0249414_36	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_37	phrog_7566	102.3	2.3e-30	N/A	unknown function
UniRef90	UHGV-0249414_37	UniRef90_A0A3R6Y3R0	68.9	0.000000000000515	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0249414_37	411459.RUMOBE_00948	67.4	0.000000000000564	N/A	N/A
PHROG	UHGV-0249414_38	phrog_72	64.3	1.4e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249414_38	UniRef90_A0A8D9PDS2	101.0	8.08e-24	NinB protein	N/A
eggNOG-mapper	UHGV-0249414_38	445972.ANACOL_01825	113.0	2.88e-29	N/A	N/A
structural_annotation	UHGV-0249414_38	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0249414_39	K03111	127.0	2.4e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0249414_39	phrog_44	117.1	1.6e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249414_39	UniRef90_A0A1C5T9Y0	130.0	2.32e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0249414_39	397288.C806_03901	128.0	1.72e-36	Single-strand binding protein family	N/A
Pfam	UHGV-0249414_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0249414_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0249414_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0249414_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0249414_39	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_40	phrog_6969	69.8	4.9e-20	N/A	unknown function
UniRef90	UHGV-0249414_40	UniRef90_UPI00195AB05B	78.6	2.83e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0249414_40	1232446.BAIE02000002_gene816	92.8	1.26e-21	N/A	N/A
Pfam	UHGV-0249414_40	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-0249414_40	PF05584,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0249414_41	411490.ANACAC_00800	72.8	0.0000000000000133	N/A	N/A
KOfam	UHGV-0249414_42	K02315	143.4	1.99965e-42	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0249414_42	phrog_50	138.9	3.80004e-41	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249414_42	UniRef90_A0A6N7X559	172.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0249414_42	1256908.HMPREF0373_01003	152.0	5.71029e-42	N/A	N/A
Pfam	UHGV-0249414_42	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0249414_42	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0249414_42	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0249414_45	760568.Desku_0919	77.8	0.00000000000000642	N/A	N/A
structural_annotation	UHGV-0249414_45	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_47	phrog_474	102.1	8.6e-30	phosphofructokinase	other
UniRef90	UHGV-0249414_47	UniRef90_UPI001D174B3C	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-0249414_47	1111121.HMPREF1247_0807	81.3	8.08e-19	N/A	N/A
Pfam	UHGV-0249414_47	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0249414_47	PF19905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0249414_48	UniRef90_UPI0012923FF4	90.1	2.64e-22	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0249414_48	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_49	phrog_111	173.1	0	DNA methyltransferase	other
UniRef90	UHGV-0249414_49	UniRef90_UPI000CA13492	187.0	0	phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-0249414_49	411468.CLOSCI_00567	187.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0249414_49	oMTase_00015	189.4	0	orphan methyltransferase	RM
Pfam	UHGV-0249414_49	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
NCBIFam	UHGV-0249414_49	TIGR01712.1	N/A	N/A	phage N-6-adenine-methyltransferase	N/A
structural_annotation	UHGV-0249414_49	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_50	phrog_190	130.6	1e-38	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249414_50	UniRef90_A0A6N7XIA3	151.0	2.8026e-45	N/A	N/A
eggNOG-mapper	UHGV-0249414_50	1236514.BAKL01000051_gene3708	117.0	8.48e-33	N/A	N/A
Pfam	UHGV-0249414_50	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0249414_50	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_54	phrog_21026	43.0	0.0000000000054	N/A	unknown function
PHROG	UHGV-0249414_57	phrog_355	70.3	1.9e-20	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249414_57	UniRef90_A0A8B3A5C7	154.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0249414_57	97138.C820_00250	130.0	7.87e-37	N/A	N/A
Pfam	UHGV-0249414_57	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0249414_57	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_58	phrog_2245	76.5	3.7e-22	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0249414_58	UniRef90_A0A846K3D1	54.7	0.000000108	MazG domain-containing protein	N/A
structural_annotation	UHGV-0249414_58	NF001611,COG1694	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249414_61	PF07878,NF010256,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0249414_62	phrog_2059	47.8	0.00000000000028	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0249414_62	UniRef90_A0A1E5GK89	56.2	0.000000789	Antirestriction protein	N/A
eggNOG-mapper	UHGV-0249414_62	416870.llmg_1888	57.0	0.0000000707	Antirestriction protein (ArdA)	N/A
Pfam	UHGV-0249414_62	PF07275	N/A	N/A	Antirestriction protein (ArdA)	ArdA
dbAPIS	UHGV-0249414_62	APIS003	N/A	N/A	DNA mimetics, i.e. structurally and electrostatically imitate the B-form of DNA and thus function as competitive inhibitors of restriction enzymes.	N/A
COG	UHGV-0249414_62	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
structural_annotation	UHGV-0249414_62	PF07275,COG4734	N/A	N/A	N/A	N/A