UHGV-0251513 (vOTU-031450)

Viral Genome: UHGV-0251513

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0251513
vOTU ID	vOTU-031450
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR11236274_141_526945_round1256~1547784
Associated BioSample	SAMN14271000
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.83 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.979
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.85
Jumbo phage	No

Genome content
Genome length (bp)	27,328
GC content	46.46%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	98%
Average CDS length (bps)	767.31
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0251513_5	phrog_21613	86.1	3.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0251513_5	1007096.BAGW01000023_gene153	97.1	8.73e-23	N/A	N/A
PHROG	UHGV-0251513_6	phrog_1227	269.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0251513_6	UniRef90_A0A7V6VUR0	283.0	0	N/A	N/A
eggNOG-mapper	UHGV-0251513_6	861454.HMPREF9099_00347	224.0	0	N/A	N/A
Pfam	UHGV-0251513_6	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0251513_6	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0251513_6	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0251513_7	PF00486,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-0251513_8	K01160	49.3	0.00000000000013	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0251513_8	phrog_140	106.7	2e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0251513_8	UniRef90_A7B3R6	105.0	5.14e-26	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0251513_8	411470.RUMGNA_02196	105.0	8.62e-27	COG COG4570 Holliday junction resolvase	N/A
Pfam	UHGV-0251513_8	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0251513_8	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0251513_8	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0251513_9	K07451	47.4	0.00000000000033	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0251513_9	phrog_428	119.3	3.6e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0251513_9	UniRef90_A0A845LM46	309.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0251513_9	445972.ANACOL_01828	266.0	0	N/A	N/A
Pfam	UHGV-0251513_9	PF01844	N/A	N/A	HNH endonuclease	HNH
Pfam	UHGV-0251513_9	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0251513_9	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
PHROG	UHGV-0251513_10	phrog_9804	125.6	3.5e-37	N/A	unknown function
UniRef90	UHGV-0251513_10	UniRef90_W9E7Y7	92.4	3.11e-20	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0251513_10	1094508.Tsac_2439	92.4	5.22e-21	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0251513_10	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0251513_10	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_11	phrog_1994	104.0	1.4e-30	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0251513_11	UniRef90_A0A2G6ARY7	99.8	4.88e-25	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0251513_11	1158602.I590_01675	99.4	1.23e-25	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-0251513_11	PF01503	N/A	N/A	Phosphoribosyl-ATP pyrophosphohydrolase	PRA-PH
COG	UHGV-0251513_11	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0251513_11	PF12643,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_13	phrog_5781	106.8	1.8e-31	N/A	unknown function
UniRef90	UHGV-0251513_13	UniRef90_A0A1S8YN91	105.0	1.26e-27	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0251513_13	343509.SG1561	96.7	8.58e-25	N/A	N/A
Pfam	UHGV-0251513_13	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0251513_13	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0251513_13	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0251513_14	994573.T472_0213975	55.5	0.00000000118	N/A	N/A
structural_annotation	UHGV-0251513_14	NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_15	phrog_36	49.5	0.000000000000052	transcriptional regulator	transcription regulation
PHROG	UHGV-0251513_16	phrog_1569	188.5	0	N/A	unknown function
UniRef90	UHGV-0251513_16	UniRef90_R6RG22	379.0	0	S-adenosylmethionine synthetase	N/A
eggNOG-mapper	UHGV-0251513_16	665950.HMPREF1025_02641	369.0	0	S-adenosylmethionine synthetase, N-terminal domain	N/A
Pfam	UHGV-0251513_16	PF00438	N/A	N/A	S-adenosylmethionine synthetase, N-terminal domain	S-AdoMet_synt_N
COG	UHGV-0251513_16	COG0192	N/A	N/A	S-adenosylmethionine synthetase	N/A
structural_annotation	UHGV-0251513_16	PF01941,MF_00086,TIGR01034,COG0192	N/A	N/A	N/A	N/A
KOfam	UHGV-0251513_17	K00571	126.5	2.7e-37	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0251513_17	phrog_498	463.9	0	DNA methyltransferase	other
UniRef90	UHGV-0251513_17	UniRef90_A0A414XF84	473.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0251513_17	12402.Q708N6_9CAUD	437.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-0251513_17	MTase_II_00015	294.8	0	Type II methyltransferase	RM
Pfam	UHGV-0251513_17	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0251513_17	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-0251513_17	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_19	phrog_119	68.9	7.4e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0251513_19	UniRef90_A0A7C6UJJ1	128.0	2.24e-36	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0251513_19	525378.HMPREF0793_1869	66.6	0.000000000000741	HNH nucleases	N/A
Pfam	UHGV-0251513_19	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0251513_19	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0251513_20	phrog_9	317.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0251513_20	UniRef90_A0A7C6UJJ5	654.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0251513_20	349161.Dred_2607	526.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0251513_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0251513_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0251513_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0251513_20	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_21	phrog_12	139.9	1.6e-41	portal protein	head and packaging
UniRef90	UHGV-0251513_21	UniRef90_A4J7R3	299.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0251513_21	349161.Dred_2606	299.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0251513_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0251513_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0251513_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0251513_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0251513_22	K01358	119.3	4.2e-35	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0251513_22	phrog_94	222.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0251513_22	UniRef90_A0A0X8VDV0	169.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0251513_22	926561.KB900622_gene646	163.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-0251513_22	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0251513_22	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0251513_22	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_23	phrog_10	109.4	4.1e-32	major head protein	head and packaging
UniRef90	UHGV-0251513_23	UniRef90_UPI001C128ED5	409.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0251513_23	349161.Dred_2604	370.0	0	Phage capsid family	N/A
Pfam	UHGV-0251513_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0251513_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0251513_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0251513_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_24	phrog_3673	56.3	3.6e-16	Arc-like repressor	transcription regulation
UniRef90	UHGV-0251513_24	UniRef90_UPI001E602BF5	56.2	0.0000000134	Rho termination factor N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0251513_24	491915.Aflv_0665	60.1	0.0000000000295	N/A	N/A
PHROG	UHGV-0251513_25	phrog_749	43.0	0.0000000000071	N/A	unknown function
eggNOG-mapper	UHGV-0251513_25	349161.Dred_2603	68.6	0.000000000000128	N/A	N/A
PHROG	UHGV-0251513_26	phrog_19734	93.8	1.5e-27	N/A	unknown function
UniRef90	UHGV-0251513_26	UniRef90_A0A0D8I708	120.0	9.54e-33	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0251513_26	349161.Dred_2602	112.0	1.69e-30	N/A	N/A
Pfam	UHGV-0251513_26	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0251513_27	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_28	phrog_88	76.9	2.4e-22	major tail protein	tail
eggNOG-mapper	UHGV-0251513_28	573061.Clocel_0789	76.3	0.0000000000000192	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0251513_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0251513_28	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0251513_28	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_30	phrog_5	51.5	0.000000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-0251513_30	UniRef90_A4J7Q8	84.7	3.88e-18	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0251513_30	349161.Dred_2601	84.7	6.5e-19	Phage protein, HK97 gp10 family	N/A
Pfam	UHGV-0251513_30	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0251513_30	TIGR01725	N/A	N/A	N/A	N/A
KOfam	UHGV-0251513_31	K20283	40.6	0.00000000000078	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0251513_31	phrog_1533	212.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0251513_31	UniRef90_A0A1E7S2U1	193.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-0251513_31	596315.HMPREF0634_0226	317.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0251513_31	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0251513_31	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0251513_31	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0251513_31	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0251513_32	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_33	phrog_1067	223.6	0	minor head protein	head and packaging
UniRef90	UHGV-0251513_33	UniRef90_A0A1M6KY09	177.0	2.8026e-43	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-0251513_33	1443125.Z962_07985	203.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0251513_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0251513_33	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0251513_33	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0251513_33	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_34	phrog_23820	41.4	0.000000000028	tail fiber protein	tail
eggNOG-mapper	UHGV-0251513_34	938278.CAJO01000051_gene772	63.5	0.000000131	domain, Protein	N/A
COG	UHGV-0251513_34	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0251513_35	phrog_1062	64.6	7.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0251513_35	938288.HG326226_gene876	75.1	0.00000000000124	N/A	N/A