UHGV-0255868 (vOTU-116331)

Viral Genome: UHGV-0255868

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0255868
vOTU ID	vOTU-116331
Representative Genome?	Yes
Source	mMGE
Original genome ID	k99_54028_round1256~3590623
Associated BioSample	SAMEA4813868
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.43 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9832
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.03
Jumbo phage	No

Genome content
Genome length (bp)	25,829
GC content	54.47%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	97%
Average CDS length (bps)	534.19
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0255868_1	phrog_27197	66.9	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0255868_1	767434.Fraau_1460	55.5	0.000000216	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0255868_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
UniRef90	UHGV-0255868_2	UniRef90_A0A8D9UH91	316.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0255868_2	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0255868_2	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_4	phrog_253	85.2	9.4e-25	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0255868_4	UniRef90_A0A8D9PDS3	317.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-0255868_4	748224.HMPREF9436_03356	105.0	1.3e-26	Siphovirus Gp157	N/A
Pfam	UHGV-0255868_4	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0255868_4	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_5	phrog_7838	143.8	1.19951e-42	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0255868_5	UniRef90_A0A8D9UGW3	431.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0255868_5	742767.HMPREF9456_02052	190.0	0	N/A	N/A
structural_annotation	UHGV-0255868_5	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_6	phrog_1389	80.1	2.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0255868_6	1347392.CCEZ01000060_gene3269	113.0	3.1e-31	N/A	N/A
structural_annotation	UHGV-0255868_6	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_8	phrog_7566	102.5	2.3e-30	N/A	unknown function
UniRef90	UHGV-0255868_8	UniRef90_A0A8D9UHC0	143.0	1.07059e-42	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0255868_8	693746.OBV_24070	115.0	4.43e-32	N/A	N/A
KOfam	UHGV-0255868_9	K03111	146.0	3.9937e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0255868_9	phrog_44	144.1	8.39378e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0255868_9	UniRef90_G4L1H2	199.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0255868_9	693746.OBV_19910	199.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0255868_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0255868_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0255868_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0255868_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0255868_9	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_11	phrog_15768	105.8	1.9e-33	N/A	unknown function
UniRef90	UHGV-0255868_11	UniRef90_A0A8D9PDU3	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-0255868_11	203119.Cthe_2466	82.0	0.00000000000000125	N/A	N/A
Pfam	UHGV-0255868_11	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0255868_11	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_13	phrog_190	98.3	7.8e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0255868_13	UniRef90_A0A8D9PDD6	257.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0255868_13	862517.HMPREF9225_1657	72.0	0.0000000000000273	N/A	N/A
Pfam	UHGV-0255868_13	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0255868_13	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0255868_14	K00571	111.7	9e-33	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0255868_14	phrog_67	105.0	1.1e-31	DNA methyltransferase	other
UniRef90	UHGV-0255868_14	UniRef90_A0A1C6E5W1	395.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0255868_14	749222.Nitsa_1817	370.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0255868_14	MTase_II_00157	91.1	5.7e-27	Type II methyltransferase	RM
Pfam	UHGV-0255868_14	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0255868_14	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0255868_14	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_16	phrog_757	173.7	0	DNA methyltransferase	other
UniRef90	UHGV-0255868_16	UniRef90_UPI001A9BD7A0	397.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0255868_16	748224.HMPREF9436_03069	311.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0255868_16	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0255868_16	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_17	phrog_111	145.1	3.79752e-43	DNA methyltransferase	other
UniRef90	UHGV-0255868_17	UniRef90_A0A1L5KS67	196.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
eggNOG-mapper	UHGV-0255868_17	445972.ANACOL_03344	179.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0255868_17	oMTase_00015	162.4	0	orphan methyltransferase	RM
Pfam	UHGV-0255868_17	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0255868_17	PF05869,TIGR01712,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_21	phrog_38832	54.0	1.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0255868_21	665956.HMPREF1032_03087	74.7	0.00000000000000604	N/A	N/A
PHROG	UHGV-0255868_22	phrog_599	48.0	0.00000000000027	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0255868_22	UniRef90_A0A315Y4I9	107.0	1.57e-28	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0255868_22	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0255868_22	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0255868_22	TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0255868_23	UniRef90_A0A8D9PDK2	139.0	7.22005e-41	Zinc-ribbon containing domain	N/A
structural_annotation	UHGV-0255868_26	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-0255868_27	K22299	47.4	0.00000000000047	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0255868_27	phrog_8	64.7	2.1e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0255868_27	UniRef90_A0A8D9PDC4	152.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-0255868_27	1226322.HMPREF1545_00039	79.0	1.69e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-0255868_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0255868_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0255868_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_28	phrog_606	90.4	2e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0255868_28	UniRef90_UPI00195648BB	177.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0255868_28	445972.ANACOL_01838	152.0	1.4013e-45	DNA-packaging protein gp3	N/A
Pfam	UHGV-0255868_28	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-0255868_29	K06909	388.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0255868_29	phrog_3717	163.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0255868_29	UniRef90_A0A2U1BEH4	755.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0255868_29	33035.JPJF01000106_gene3136	462.0	0	Terminase small subunit	N/A
Pfam	UHGV-0255868_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0255868_29	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0255868_29	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0255868_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0255868_29	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_30	phrog_533	396.5	0	portal protein	head and packaging
UniRef90	UHGV-0255868_30	UniRef90_A0A1C5N775	699.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0255868_30	1226322.HMPREF1545_00044	661.0	0	N/A	N/A
Pfam	UHGV-0255868_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0255868_30	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_31	phrog_581	280.2	0	minor head protein	head and packaging
UniRef90	UHGV-0255868_31	UniRef90_A0A1C5N7V1	506.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0255868_31	1226322.HMPREF1545_00046	335.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0255868_31	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0255868_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255868_31	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255868_32	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_33	phrog_194	90.7	2.2e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0255868_33	UniRef90_A0A2Z4Q9Y8	129.0	2.94e-34	Minor structural protein	N/A
eggNOG-mapper	UHGV-0255868_33	1232443.BAIA02000078_gene31	97.1	7.82e-23	N/A	N/A
Pfam	UHGV-0255868_33	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0255868_33	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_34	phrog_212	269.0	0	major head protein	head and packaging
UniRef90	UHGV-0255868_34	UniRef90_A0A2V2FIN1	499.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0255868_34	1232449.BAHV02000010_gene2714	348.0	0	N/A	N/A
structural_annotation	UHGV-0255868_34	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_35	phrog_541	104.9	5.4e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0255868_35	642492.Clole_0822	69.3	0.000000000000361	N/A	N/A
PHROG	UHGV-0255868_36	phrog_3366	90.5	1.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0255868_36	1226322.HMPREF1545_00053	153.0	0	N/A	N/A
structural_annotation	UHGV-0255868_36	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_37	phrog_556	77.6	1.4e-22	minor head protein	head and packaging
UniRef90	UHGV-0255868_37	UniRef90_UPI00195E1497	185.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0255868_37	1226322.HMPREF1545_00054	154.0	0	Minor capsid protein	N/A
Pfam	UHGV-0255868_37	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0255868_37	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_38	phrog_3266	61.8	1.1e-17	tail completion	connector
UniRef90	UHGV-0255868_38	UniRef90_A0A2Z4QA01	123.0	8.73e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0255868_38	1232443.BAIA02000078_gene24	186.0	0	N/A	N/A
structural_annotation	UHGV-0255868_38	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_39	phrog_3099	91.3	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0255868_39	1226322.HMPREF1545_00056	245.0	0	N/A	N/A
structural_annotation	UHGV-0255868_39	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_40	phrog_11299	73.5	3.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0255868_40	693746.OBV_18160	143.0	4.39027e-42	N/A	N/A
structural_annotation	UHGV-0255868_40	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_41	phrog_706	116.4	2.4e-34	N/A	unknown function
UniRef90	UHGV-0255868_41	UniRef90_UPI000682A80B	222.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0255868_41	693746.OBV_18170	214.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0255868_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0255868_41	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0255868_42	K03529	42.7	0.0000000000028	smc; chromosome segregation protein	N/A
PHROG	UHGV-0255868_42	phrog_1535	120.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0255868_42	UniRef90_A0A810PX76	300.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0255868_42	1235797.C816_04182	261.0	0	SLT domain	N/A
COG	UHGV-0255868_42	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0255868_42	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_43	phrog_1194	60.3	3.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0255868_43	1226322.HMPREF1545_00060	238.0	0	N/A	N/A
structural_annotation	UHGV-0255868_43	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_44	phrog_13879	246.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0255868_44	1226322.HMPREF1545_00061	494.0	0	N/A	N/A
structural_annotation	UHGV-0255868_44	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0255868_45	phrog_18725	71.7	5.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0255868_45	1235797.C816_02657	67.4	0.0000000000582	N/A	N/A
COG	UHGV-0255868_45	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
KOfam	UHGV-0255868_47	K20285	43.1	0.0000000000046	RABEPK; Rab9 effector protein with kelch motifs	N/A
Pfam	UHGV-0255868_47	PF07646	N/A	N/A	Kelch motif	Kelch_2