UHGV-0257846 (vOTU-133907)

Viral Genome: UHGV-0257846

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0257846
vOTU ID	vOTU-133907
Representative Genome?	Yes
Source	mMGE
Original genome ID	DRR127669_141_239_round13~8065213
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.06 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9722
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.15
Jumbo phage	No

Genome content
Genome length (bp)	24,742
GC content	29.08%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	94%
Average CDS length (bps)	457.65
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0257846_5	phrog_3584	286.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0257846_5	UniRef90_I2E8X7	241.0	0	Gp31	N/A
eggNOG-mapper	UHGV-0257846_5	1414720.CBYM010000002_gene589	468.0	0	N/A	N/A
structural_annotation	UHGV-0257846_5	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_6	phrog_824	153.9	0	N/A	unknown function
UniRef90	UHGV-0257846_6	UniRef90_UPI0018AB5F85	245.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0257846_6	1414720.CBYM010000002_gene588	203.0	0	VRR-NUC domain	N/A
Pfam	UHGV-0257846_6	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0257846_6	PF08774	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0257846_7	1414720.CBYM010000002_gene587	100.0	5.89e-27	N/A	N/A
structural_annotation	UHGV-0257846_8	PF11148,MF_01553,COG5503	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_9	phrog_98	50.1	0.000000000000047	N/A	unknown function
UniRef90	UHGV-0257846_9	UniRef90_A0A1C6JML6	258.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-0257846_9	1414720.CBYM010000002_gene585	261.0	0	YopX protein	N/A
Pfam	UHGV-0257846_9	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0257846_9	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0257846_13	999411.HMPREF1092_03351	77.8	1.65e-18	N/A	N/A
eggNOG-mapper	UHGV-0257846_14	1391647.AVSV01000022_gene2528	105.0	4.66e-28	N/A	N/A
eggNOG-mapper	UHGV-0257846_21	1414720.CBYM010000040_gene1631	134.0	9.54004e-41	N/A	N/A
PHROG	UHGV-0257846_22	phrog_22662	48.2	0.00000000000023	N/A	unknown function
PHROG	UHGV-0257846_25	phrog_373	167.4	0	anti-repressor	transcription regulation
UniRef90	UHGV-0257846_25	UniRef90_UPI0018AC2428	285.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0257846_25	1414720.CBYM010000002_gene582	461.0	0	ORF6C domain	N/A
Pfam	UHGV-0257846_25	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0257846_25	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-0257846_25	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0257846_25	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0257846_25	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_26	phrog_1974	51.5	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0257846_26	1414720.CBYM010000002_gene581	141.0	2.17e-39	37-kD nucleoid-associated bacterial protein	N/A
Pfam	UHGV-0257846_26	PF04245	N/A	N/A	37-kD nucleoid-associated bacterial protein	NA37
COG	UHGV-0257846_26	COG3081	N/A	N/A	dsDNA-binding nucleoid-associated protein YejK/NdpA	N/A
KOfam	UHGV-0257846_27	K03744	150.2	1.82169e-44	lemA; LemA protein	N/A
PHROG	UHGV-0257846_27	phrog_1383	145.9	1.79366e-43	virion structural protein	head and packaging
UniRef90	UHGV-0257846_27	UniRef90_UPI0018A93D91	286.0	0	LemA family protein	N/A
eggNOG-mapper	UHGV-0257846_27	742735.HMPREF9467_00879	229.0	0	LemA family	N/A
Pfam	UHGV-0257846_27	PF04011	N/A	N/A	LemA family	LemA
COG	UHGV-0257846_27	COG1704	N/A	N/A	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	N/A
structural_annotation	UHGV-0257846_27	PF04011,NF040966,COG1704	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_28	phrog_3886	263.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0257846_28	742735.HMPREF9467_00880	261.0	0	N/A	N/A
PHROG	UHGV-0257846_29	phrog_25509	118.6	2.2e-35	N/A	unknown function
eggNOG-mapper	UHGV-0257846_29	1414720.CBYM010000002_gene580	178.0	0	N/A	N/A
UniRef90	UHGV-0257846_30	UniRef90_A0A1C6JMI4	232.0	0	Alternative sigma factor RpoH	N/A
eggNOG-mapper	UHGV-0257846_30	1414720.CBYM010000002_gene578	232.0	0	N/A	N/A
structural_annotation	UHGV-0257846_30	PF04545,MF_00683,NF008895	N/A	N/A	N/A	N/A
KOfam	UHGV-0257846_31	K19370	41.1	0.000000000018	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-0257846_31	phrog_2546	84.5	1.8e-24	N/A	unknown function
UniRef90	UHGV-0257846_31	UniRef90_UPI0006C261E9	182.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0257846_31	1280689.AUJC01000003_gene973	99.0	1.64e-23	N/A	N/A
Pfam	UHGV-0257846_31	PF05154	N/A	N/A	TM2 domain	TM2
structural_annotation	UHGV-0257846_31	PF05154,PF02701,COG3478,COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0257846_32	K07451	51.1	0.000000000000025	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0257846_32	phrog_144	82.5	5.2e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0257846_32	UniRef90_A0A1C6JML1	265.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0257846_32	1414720.CBYM010000002_gene577	265.0	0	HNH nucleases	N/A
Pfam	UHGV-0257846_32	PF01844	N/A	N/A	HNH endonuclease	HNH
UniRef90	UHGV-0257846_33	UniRef90_A0A1C6JNN5	225.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0257846_33	1414720.CBYM010000002_gene576	355.0	0	N/A	N/A
structural_annotation	UHGV-0257846_33	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_34	phrog_9	241.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0257846_34	UniRef90_UPI0004B72672	1105.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0257846_34	1414720.CBYM010000002_gene575	1105.0	0	Terminase	N/A
Pfam	UHGV-0257846_34	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0257846_34	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0257846_34	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0257846_34	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_35	phrog_12	188.9	0	portal protein	head and packaging
UniRef90	UHGV-0257846_35	UniRef90_UPI0004B5AC91	760.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0257846_35	1414720.CBYM010000002_gene574	760.0	0	Portal protein	N/A
Pfam	UHGV-0257846_35	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0257846_35	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0257846_35	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0257846_35	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0257846_36	K06904	106.1	4.8e-31	N/A	N/A
PHROG	UHGV-0257846_36	phrog_80	134.5	1.2e-39	head maturation protease	head and packaging
UniRef90	UHGV-0257846_36	UniRef90_UPI00164AE523	352.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0257846_36	1414720.CBYM010000002_gene573	345.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0257846_36	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0257846_36	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0257846_36	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0257846_36	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_37	phrog_10	211.2	0	major head protein	head and packaging
UniRef90	UHGV-0257846_37	UniRef90_UPI0018A9C330	679.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0257846_37	1414720.CBYM010000002_gene572	661.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0257846_37	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0257846_37	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0257846_37	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0257846_37	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_38	phrog_6865	51.2	0.00000000000002	N/A	unknown function
structural_annotation	UHGV-0257846_38	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_39	phrog_40	48.1	0.00000000000016	head-tail adaptor Ad1	connector
UniRef90	UHGV-0257846_39	UniRef90_UPI001055080F	148.0	8.40779e-45	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0257846_39	1414720.CBYM010000002_gene570	178.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0257846_39	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0257846_39	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0257846_39	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_40	phrog_25	92.9	2.6e-27	head closure Hc1	connector
UniRef90	UHGV-0257846_40	UniRef90_A0A1C6JMX8	215.0	0	Bacteriophage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0257846_40	1414720.CBYM010000002_gene569	215.0	0	Phage head-tail joining protein	N/A
Pfam	UHGV-0257846_40	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0257846_40	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0257846_40	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0257846_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_41	phrog_5	56.4	5.9e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0257846_41	UniRef90_A0A1C6JN94	291.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0257846_41	1414720.CBYM010000002_gene568	291.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0257846_41	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0257846_41	PF17395,TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0257846_42	UniRef90_UPI000BB98E7D	130.0	1.76e-36	N/A	N/A
eggNOG-mapper	UHGV-0257846_42	1414720.CBYM010000002_gene567	253.0	0	N/A	N/A
structural_annotation	UHGV-0257846_42	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_43	phrog_158	65.9	8.1e-19	major tail protein	tail
UniRef90	UHGV-0257846_43	UniRef90_A0A1C6JNH2	260.0	0	Predicted secreted protein	N/A
eggNOG-mapper	UHGV-0257846_43	1414720.CBYM010000002_gene566	260.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0257846_43	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-0257846_43	PF16461,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_45	phrog_2115	55.8	9.3e-16	tail protein	tail
eggNOG-mapper	UHGV-0257846_45	1414720.CBYM010000002_gene564	200.0	0	N/A	N/A
structural_annotation	UHGV-0257846_45	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_46	phrog_19318	55.0	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-0257846_46	UniRef90_A0A533S6H6	72.0	0.0000000000000252	Phage tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0257846_46	1414720.CBYM010000001_gene706	69.7	0.0000000000000246	N/A	N/A
Pfam	UHGV-0257846_46	PF09550	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_6
PHROG	UHGV-0257846_47	phrog_31409	338.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0257846_47	UniRef90_A0A1C6GVH2	436.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0257846_47	1414720.CBYM010000002_gene562	1164.0	0	phage tail tape measure protein	N/A
COG	UHGV-0257846_47	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0257846_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_48	phrog_1194	132.6	1.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0257846_48	1414720.CBYM010000002_gene561	234.0	0	N/A	N/A
Pfam	UHGV-0257846_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0257846_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_49	phrog_6616	188.8	0	tail protein	tail
UniRef90	UHGV-0257846_49	UniRef90_UPI0007AE71C3	114.0	5.87e-23	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0257846_49	1414720.CBYM010000002_gene560	1083.0	0	Phage minor structural protein	N/A
COG	UHGV-0257846_49	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0257846_49	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0257846_51	phrog_17334	73.9	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0257846_51	1414720.CBYM010000002_gene558	134.0	2.42e-33	GDSL-like Lipase/Acylhydrolase	N/A
COG	UHGV-0257846_51	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A