UHGV-0265420 (vOTU-049801)

Viral Genome: UHGV-0265420

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0265420
vOTU ID	vOTU-049801
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR2042033_141_116_round8-12~904669
Associated BioSample	SAMEA4702396
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9698
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.33
Jumbo phage	No

Genome content
Genome length (bp)	42,867
GC content	32.94%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	70
CDS density	92%
Average CDS length (bps)	561.60
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0265420_1	phrog_419	104.8	1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0265420_1	279010.BL00889	103.0	5.16e-28	N/A	N/A
structural_annotation	UHGV-0265420_1	PF14083	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0265420_2	428127.EUBDOL_01238	62.0	0.0000000000492	N/A	N/A
PHROG	UHGV-0265420_5	phrog_954	239.5	0	DNA methyltransferase	other
UniRef90	UHGV-0265420_5	UniRef90_A0A3E3EG87	326.0	0	SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0265420_5	1232446.BAIE02000011_gene1614	319.0	0	methyltransferase	N/A
PADLOC	UHGV-0265420_5	MTase_II_00074	238.1	0	Type II methyltransferase	RM
Pfam	UHGV-0265420_5	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0265420_5	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0265420_5	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_9	phrog_173	112.6	3.5e-33	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_9	UniRef90_A0A3E3AEA0	333.0	0	dUTPase	N/A
eggNOG-mapper	UHGV-0265420_9	1352230.S6AVW3_9CAUD	100.0	9.49e-25	dCTP diphosphatase activity	N/A
Pfam	UHGV-0265420_9	PF08761	N/A	N/A	dUTPase	dUTPase_2
structural_annotation	UHGV-0265420_9	PF08761,COG4508	N/A	N/A	N/A	N/A
KOfam	UHGV-0265420_12	K02316	103.9	2e-30	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0265420_12	phrog_864	272.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_12	UniRef90_UPI001D08D333	601.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-0265420_12	469596.HMPREF9488_01547	283.0	0	D5 N terminal like	N/A
Pfam	UHGV-0265420_12	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-0265420_12	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0265420_12	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-0265420_12	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0265420_12	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0265420_12	PF04735,MF_00974,MF_04000,NF005477,COG3378,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_13	phrog_606	42.1	0.0000000000059	terminase small subunit	head and packaging
UniRef90	UHGV-0265420_13	UniRef90_A0A318EMC2	103.0	7.22e-24	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0265420_13	1235793.C809_00539	63.5	0.000000000931	N/A	N/A
Pfam	UHGV-0265420_13	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
UniRef90	UHGV-0265420_16	UniRef90_A0A3E3AET2	152.0	0	XRE family transcriptional regulator	N/A
Pfam	UHGV-0265420_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0265420_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0265420_16	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0265420_17	K14060	114.1	1.5e-33	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0265420_17	phrog_125	159.0	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_17	UniRef90_A0A3E3AEZ4	359.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0265420_17	1410670.JHXF01000007_gene588	170.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0265420_17	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0265420_17	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0265420_17	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_18	phrog_1233	72.2	8.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0265420_18	357809.Cphy_2967	67.8	0.000000000000273	N/A	N/A
structural_annotation	UHGV-0265420_18	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_19	phrog_38	171.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0265420_19	UniRef90_A0A318EQM2	467.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0265420_19	1123263.AUKY01000015_gene1608	480.0	0	chromosome segregation	N/A
COG	UHGV-0265420_19	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0265420_19	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_20	phrog_64	228.8	0	portal protein	head and packaging
UniRef90	UHGV-0265420_20	UniRef90_A0A3E3AE79	924.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0265420_20	1121866.AUGK01000003_gene1429	270.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0265420_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0265420_20	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_22	phrog_544	69.6	1.8e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-0265420_22	428127.EUBDOL_01555	322.0	0	N/A	N/A
structural_annotation	UHGV-0265420_22	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0265420_23	UniRef90_A0A374HKI7	75.5	0.00000000000000133	DNA-packaging protein	N/A
structural_annotation	UHGV-0265420_23	TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0265420_25	UniRef90_UPI001BBD4500	103.0	5.85e-25	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0265420_25	397290.C810_01411	106.0	1.17e-26	N/A	N/A
structural_annotation	UHGV-0265420_25	PF17395,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0265420_26	1121333.JMLH01000047_gene1014	67.0	0.00000000000282	N/A	N/A
structural_annotation	UHGV-0265420_26	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_27	phrog_158	47.5	0.00000000000029	major tail protein	tail
eggNOG-mapper	UHGV-0265420_27	1121333.JMLH01000047_gene1013	244.0	0	N/A	N/A
structural_annotation	UHGV-0265420_27	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0265420_28	UniRef90_A0A3E3AED0	210.0	0	N/A	N/A
eggNOG-mapper	UHGV-0265420_28	1121333.JMLH01000047_gene1012	181.0	0	N/A	N/A
Pfam	UHGV-0265420_28	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0265420_28	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0265420_29	1121333.JMLH01000047_gene1011	136.0	1.31e-39	N/A	N/A
PHROG	UHGV-0265420_30	phrog_1535	258.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0265420_30	UniRef90_A8RD17	256.0	0	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-0265420_30	469596.HMPREF9488_01316	383.0	0	N/A	N/A
PHROG	UHGV-0265420_31	phrog_1194	105.5	3.3e-31	N/A	unknown function
UniRef90	UHGV-0265420_31	UniRef90_A0A4U9RD70	101.0	2.39e-25	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0265420_31	1211844.CBLM010000023_gene979	129.0	3.94e-37	N/A	N/A
Pfam	UHGV-0265420_31	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0265420_31	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_33	phrog_6616	98.7	1.9e-29	tail protein	tail
eggNOG-mapper	UHGV-0265420_33	1211844.CBLM010000023_gene978	486.0	0	cellulase activity	N/A
COG	UHGV-0265420_33	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0265420_34	phrog_30133	100.8	5e-30	virion structural protein	head and packaging
UniRef90	UHGV-0265420_34	UniRef90_UPI00048904C4	268.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0265420_34	1504823.CCMM01000008_gene1029	281.0	0	N/A	N/A
structural_annotation	UHGV-0265420_34	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_35	phrog_819	205.0	0	tail protein	tail
UniRef90	UHGV-0265420_35	UniRef90_A0A3E3AC96	187.0	0	Collagen-like protein (Fragment)	N/A
eggNOG-mapper	UHGV-0265420_35	445974.CLORAM_02919	303.0	0	cellulase activity	N/A
COG	UHGV-0265420_35	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0265420_35	PF20986	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_36	phrog_372	327.2	0	tail protein	tail
UniRef90	UHGV-0265420_36	UniRef90_UPI001E5C78A4	214.0	0	N/A	N/A
eggNOG-mapper	UHGV-0265420_36	445974.CLORAM_02918	862.0	0	N/A	N/A
Pfam	UHGV-0265420_36	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0265420_36	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0265420_36	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0265420_38	PF12961,MF_00771,NF002617,COG3215	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_39	phrog_10091	119.1	2.5e-35	holin	lysis
UniRef90	UHGV-0265420_39	UniRef90_A0A7U9CEZ0	166.0	0	Phage phi LC3 family holin	N/A
eggNOG-mapper	UHGV-0265420_39	428127.EUBDOL_01206	129.0	5.83e-38	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0265420_39	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0265420_39	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0265420_39	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0265420_39	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_40	phrog_1863	84.1	8.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0265420_40	1232449.BAHV02000017_gene1511	69.7	0.00000000000000871	N/A	N/A
KOfam	UHGV-0265420_41	K21471	45.7	0.0000000000014	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0265420_41	UniRef90_A0A416DTG4	307.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0265420_41	411902.CLOBOL_04837	170.0	0	Phage lysozyme	N/A
Pfam	UHGV-0265420_41	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0265420_41	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
UniRef90	UHGV-0265420_43	UniRef90_A0A7U9GPK7	119.0	2.7e-34	SH3b domain-containing protein	N/A
Pfam	UHGV-0265420_43	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0265420_43	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
KOfam	UHGV-0265420_46	K14059	117.0	2.7e-34	int; integrase	N/A
PHROG	UHGV-0265420_46	phrog_1	130.6	1.4e-38	integrase	integration and excision
UniRef90	UHGV-0265420_46	UniRef90_UPI00067F1555	292.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0265420_46	1504823.CCMM01000008_gene1083	283.0	0	DNA integration	N/A
COG	UHGV-0265420_46	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0265420_46	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0265420_48	K19449	47.4	0.00000000000039	sinR; XRE family transcriptional regulator, master regulator for biofilm formation	N/A
PHROG	UHGV-0265420_48	phrog_8	40.7	0.00000000005	transcriptional regulator	transcription regulation
UniRef90	UHGV-0265420_48	UniRef90_A0A3E3AF22	127.0	2.97e-37	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0265420_48	411468.CLOSCI_01455	64.7	0.000000000000355	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0265420_48	retron_type_VI_hth_cluster2_1	41.7	0.000000000031	N/A	Retron
Pfam	UHGV-0265420_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0265420_48	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0265420_49	K22300	70.1	4.5e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0265420_49	phrog_8	72.8	6.7e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0265420_49	UniRef90_A0A3E3AEC7	234.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0265420_49	742741.HMPREF9475_00400	67.0	0.0000000000015	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0265420_49	retron_type_VI_hth_cluster2_1	51.8	0.000000000000019	N/A	Retron
Pfam	UHGV-0265420_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0265420_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0265420_49	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0265420_50	K18830	55.2	0.0000000000000018	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0265420_50	phrog_8	55.5	0.0000000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0265420_50	UniRef90_A0A3E3AFB2	135.0	2.61999e-40	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0265420_50	536232.CLM_2628	58.2	0.000000000252	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0265420_50	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0265420_50	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0265420_50	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0265420_51	K07741	200.7	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0265420_51	phrog_63	140.1	2.09999e-41	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0265420_51	UniRef90_UPI001F321D81	575.0	0	antA/AntB antirepressor family protein	N/A
eggNOG-mapper	UHGV-0265420_51	1123263.AUKY01000076_gene1778	256.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0265420_51	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0265420_51	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0265420_51	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0265420_55	PF04325,TIGR04116,COG5570	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_56	phrog_2872	214.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_56	UniRef90_A0A3E3AEA8	414.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0265420_56	1415774.U728_1119	240.0	0	AAA domain	N/A
Pfam	UHGV-0265420_56	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0265420_56	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_57	phrog_253	80.2	3.1e-23	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_57	UniRef90_UPI00069126B1	152.0	3.08286e-44	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0265420_57	1504823.CCMM01000008_gene1065	152.0	5.60519e-45	Siphovirus Gp157	N/A
Pfam	UHGV-0265420_57	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0265420_57	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_58	phrog_18107	79.1	3.9e-23	N/A	unknown function
UniRef90	UHGV-0265420_58	UniRef90_A0A412CGY7	102.0	5.04e-24	N/A	N/A
eggNOG-mapper	UHGV-0265420_58	903814.ELI_1274	157.0	0	N/A	N/A
structural_annotation	UHGV-0265420_58	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-0265420_59	K19789	250.2	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0265420_59	phrog_16	204.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_59	UniRef90_A0A6N8HZM3	312.0	0	Putative DNA repair helicase RadD	N/A
eggNOG-mapper	UHGV-0265420_59	1231377.C426_0598	307.0	0	helicase	N/A
PADLOC	UHGV-0265420_59	mREase_IV_00005	60.8	1.6e-17	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0265420_59	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0265420_59	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0265420_59	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0265420_59	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0265420_63	phrog_154	49.7	0.000000000000056	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_63	UniRef90_A0A3E3AEB7	177.0	0	N/A	N/A
Pfam	UHGV-0265420_63	PF17399	N/A	N/A	N/A	DUF5405
PHROG	UHGV-0265420_68	phrog_5702	58.1	8.8e-17	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0265420_68	UniRef90_A0A3E3AEG4	221.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0265420_68	326425.lhe_1219	50.1	0.00000262	VRR_NUC	N/A
PHROG	UHGV-0265420_69	phrog_22292	68.7	7.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0265420_69	1232446.BAIE02000041_gene2433	175.0	0	N/A	N/A
UniRef90	UHGV-0265420_70	UniRef90_UPI000E5484AD	138.0	8.87022e-42	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0265420_70	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0265420_70	PF14354	N/A	N/A	N/A	N/A