UHGV-0269601 (vOTU-007608)

Viral Genome: UHGV-0269601

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0269601
vOTU ID	vOTU-007608
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_110853_round13~6278516
Associated BioSample	SAMN13509756
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.12 (High-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9708
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.31
Jumbo phage	No

Genome content
Genome length (bp)	32,906
GC content	56.18%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	45
CDS density	94%
Average CDS length (bps)	689.73
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0269601_1	K06400	355.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0269601_1	phrog_95	338.8	0	integrase	integration and excision
UniRef90	UHGV-0269601_1	UniRef90_UPI000B3A7453	488.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0269601_1	1235835.C814_00825	441.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0269601_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0269601_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0269601_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0269601_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0269601_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0269601_2	97138.C820_00636	55.1	0.00000102	N/A	N/A
AcrCatalog	UHGV-0269601_2	cluster_27895	46.6	0.0000000271	NA	N/A
UniRef90	UHGV-0269601_3	UniRef90_A0A1C5RDF3	93.6	6.57e-22	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0269601_3	999413.HMPREF1094_00245	90.5	2.82e-20	Peptidase S24-like	N/A
COG	UHGV-0269601_3	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
UniRef90	UHGV-0269601_4	UniRef90_A0A3A9EKT9	55.1	0.0000000174	XRE family transcriptional regulator	N/A
KOfam	UHGV-0269601_7	K00390	57.6	1.8e-16	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0269601_7	phrog_424	138.2	5.90003e-41	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0269601_7	UniRef90_G9RV39	512.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0269601_7	665956.HMPREF1032_00140	512.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0269601_7	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0269601_7	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0269601_7	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_10	phrog_4581	88.9	7.4e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0269601_10	UniRef90_A0A380F7Q0	80.5	0.00000000000000188	Phage-associated homing endonuclease	N/A
eggNOG-mapper	UHGV-0269601_10	1141106.CAIB01000128_gene1076	69.7	0.0000000000033	HNH nucleases	N/A
COG	UHGV-0269601_10	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0269601_15	K00558	136.0	2e-40	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0269601_15	phrog_116	103.0	2.1e-37	DNA methyltransferase	other
UniRef90	UHGV-0269601_15	UniRef90_A0A371JBS1	326.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0269601_15	397290.C810_05213	210.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0269601_15	MTase_II_00174	137.0	2.29999e-40	Type II methyltransferase	RM
Pfam	UHGV-0269601_15	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0269601_15	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0269601_15	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0269601_16	phrog_17284	43.9	0.0000000000032	N/A	unknown function
UniRef90	UHGV-0269601_16	UniRef90_UPI001CF3F91D	70.9	0.0000000000000319	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0269601_16	1391647.AVSV01000003_gene1798	71.2	0.000000000000119	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0269601_16	oMTase_00023	51.5	0.000000000000024	orphan methyltransferase	RM
Pfam	UHGV-0269601_16	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0269601_16	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0269601_17	phrog_3136	69.2	5.6e-20	N/A	unknown function
UniRef90	UHGV-0269601_17	UniRef90_A0A2V2FDG6	66.2	0.0000000000479	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0269601_17	394503.Ccel_3165	57.8	0.00000000957	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0269601_17	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0269601_17	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0269601_17	PF04266,MF_00684,NF003443,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_19	phrog_3584	237.6	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0269601_19	97139.C824_00747	168.0	0	N/A	N/A
structural_annotation	UHGV-0269601_19	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_20	phrog_37023	111.8	5.3e-33	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0269601_20	UniRef90_A0A6S6XBJ8	159.0	0	Tn7_Tnp_TnsA_N domain-containing protein	N/A
Pfam	UHGV-0269601_20	PF06356	N/A	N/A	N/A	DUF1064
KOfam	UHGV-0269601_21	K03660	156.4	0	OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]	N/A
UniRef90	UHGV-0269601_21	UniRef90_A0A1Y3RS13	219.0	0	ENDO3c domain-containing protein	N/A
eggNOG-mapper	UHGV-0269601_21	1123075.AUDP01000006_gene2531	160.0	8.40779e-45	8-oxoguanine DNA glycosylase	N/A
Pfam	UHGV-0269601_21	PF07934	N/A	N/A	8-oxoguanine DNA glycosylase, N-terminal domain	OGG_N
COG	UHGV-0269601_21	COG0122	N/A	N/A	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	N/A
structural_annotation	UHGV-0269601_21	PF07934,PF00730,MF_00942,TIGR00588,COG0122	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0269601_22	1507.HMPREF0262_00210	78.6	2.09e-16	N/A	N/A
structural_annotation	UHGV-0269601_22	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_23	phrog_119	63.6	3.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0269601_23	UniRef90_A0A4V1YA37	117.0	7.28e-32	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0269601_23	411902.CLOBOL_03884	117.0	1.22e-32	HNH endonuclease	N/A
Pfam	UHGV-0269601_23	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0269601_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0269601_24	phrog_1066	81.4	9.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0269601_24	1094508.Tsac_2428	96.7	1.1e-24	N/A	N/A
Pfam	UHGV-0269601_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-0269601_25	phrog_9	332.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0269601_25	UniRef90_A0A4V2S9X1	702.0	0	Phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0269601_25	1203606.HMPREF1526_01335	664.0	0	Terminase	N/A
Pfam	UHGV-0269601_25	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0269601_25	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0269601_25	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0269601_25	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_26	phrog_12	115.4	4.2e-34	portal protein	head and packaging
UniRef90	UHGV-0269601_26	UniRef90_A0A316PZH6	476.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0269601_26	411470.RUMGNA_02063	416.0	0	Phage portal protein	N/A
Pfam	UHGV-0269601_26	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0269601_26	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0269601_26	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0269601_27	K06904	122.3	5.4e-36	N/A	N/A
PHROG	UHGV-0269601_27	phrog_80	134.8	8.8e-40	head maturation protease	head and packaging
UniRef90	UHGV-0269601_27	UniRef90_A0A1V5IPN6	196.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0269601_27	1203606.HMPREF1526_01338	185.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0269601_27	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0269601_27	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0269601_27	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0269601_27	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_28	phrog_10	116.5	3.2e-34	major head protein	head and packaging
UniRef90	UHGV-0269601_28	UniRef90_UPI00073E62C9	285.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0269601_28	626523.GCWU000342_01025	259.0	0	Phage capsid family	N/A
Pfam	UHGV-0269601_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0269601_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0269601_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0269601_28	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_29	phrog_5223	79.1	3.3e-23	neck protein	connector
eggNOG-mapper	UHGV-0269601_29	1382358.JHVN01000024_gene1709	66.6	0.000000000000409	N/A	N/A
PHROG	UHGV-0269601_30	phrog_1951	78.6	6.3e-23	head-tail adaptor	connector
UniRef90	UHGV-0269601_30	UniRef90_UPI00164E320F	69.3	0.000000000000386	phage head closure protein	N/A
eggNOG-mapper	UHGV-0269601_30	202752.JL53_03765	70.1	0.0000000000000323	head-tail adaptor	N/A
COG	UHGV-0269601_30	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0269601_30	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0269601_31	UniRef90_A0A561DSS0	134.0	5.33e-37	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0269601_31	457396.CSBG_01052	114.0	4.36e-30	N/A	N/A
structural_annotation	UHGV-0269601_31	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0269601_32	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_33	phrog_885	156.5	0	major tail protein	tail
UniRef90	UHGV-0269601_33	UniRef90_UPI00164A9E72	162.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0269601_33	457396.CSBG_01054	162.0	0	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-0269601_33	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0269601_33	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_34	phrog_1021	48.9	0.000000000000092	N/A	unknown function
eggNOG-mapper	UHGV-0269601_34	1414720.CBYM010000040_gene1653	56.6	0.0000000126	N/A	N/A
PHROG	UHGV-0269601_36	phrog_8462	166.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0269601_36	UniRef90_A0A7M1PYL7	268.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0269601_36	457396.CSBG_01057	270.0	0	tape measure	N/A
Pfam	UHGV-0269601_36	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0269601_36	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0269601_36	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_37	phrog_33	71.0	3.1e-20	distal tail protein Dit	tail
UniRef90	UHGV-0269601_37	UniRef90_A0A0X8V9V4	77.0	0.000000000000203	Phage tail protein	N/A
eggNOG-mapper	UHGV-0269601_37	585506.HMPREF0877_0163	84.3	1.19e-16	tail component	N/A
COG	UHGV-0269601_37	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0269601_37	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_38	phrog_1067	334.5	0	minor head protein	head and packaging
UniRef90	UHGV-0269601_38	UniRef90_A0A3D5L0J3	390.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0269601_38	1160721.RBI_I01574	306.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0269601_38	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0269601_38	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0269601_38	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0269601_38	PF14594,PF00629,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_40	phrog_17147	368.9	0	N/A	unknown function
UniRef90	UHGV-0269601_40	UniRef90_A0A0M4N1P7	206.0	0	Unassigned protein	N/A
eggNOG-mapper	UHGV-0269601_40	478749.BRYFOR_08557	159.0	9.73e-38	N/A	N/A
structural_annotation	UHGV-0269601_40	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0269601_41	K00986	72.3	7e-21	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0269601_41	phrog_1423	170.4	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0269601_41	UniRef90_UPI001D089E29	285.0	0	reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0269601_41	33035.JPJF01000043_gene1000	256.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
Pfam	UHGV-0269601_41	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0269601_41	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0269601_41	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
Pfam	UHGV-0269601_43	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
KOfam	UHGV-0269601_44	K07273	119.8	3.1e-35	acm; lysozyme	N/A
PHROG	UHGV-0269601_44	phrog_291	103.5	2.9e-30	endolysin	lysis
UniRef90	UHGV-0269601_44	UniRef90_A0A318XM26	154.0	6.24979e-42	GH25 family lysozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-0269601_44	1304880.JAGB01000002_gene2202	155.0	1.20932e-42	Glycosyl hydrolase, family 25	N/A
Pfam	UHGV-0269601_44	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0269601_44	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0269601_44	PF01183,MF_02227,NF002576,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0269601_45	phrog_199	81.2	1.2e-23	holin	lysis
UniRef90	UHGV-0269601_45	UniRef90_UPI0013565B65	177.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0269601_45	1121334.KB911073_gene1876	171.0	0	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0269601_45	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0269601_45	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0269601_45	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0269601_45	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A