UHGV-0275647 (vOTU-049943)

Viral Genome: UHGV-0275647

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0275647
vOTU ID	vOTU-049943
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR10479816_141_68464_round347~3692522
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.43
Jumbo phage	No

Genome content
Genome length (bp)	40,029
GC content	46.45%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	96%
Average CDS length (bps)	766.56
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0275647_1	1410650.JHWL01000003_gene2834	88.6	1.19e-19	N/A	N/A
COG	UHGV-0275647_1	COG1783	N/A	N/A	Phage terminase large subunit	N/A
KOfam	UHGV-0275647_2	K07474	135.7	5.5e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0275647_2	phrog_51	134.3	5.6e-40	terminase small subunit	head and packaging
UniRef90	UHGV-0275647_2	UniRef90_UPI001379A213	181.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0275647_2	445971.ANASTE_00710	137.0	4.16e-39	Terminase small subunit	N/A
Pfam	UHGV-0275647_2	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0275647_2	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0275647_2	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0275647_3	K03111	140.2	2.09999e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0275647_3	phrog_44	139.8	1.70006e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275647_3	UniRef90_A0A1C5T9Y0	188.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0275647_3	1120998.AUFC01000019_gene325	167.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0275647_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0275647_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0275647_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0275647_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0275647_3	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_4	phrog_18716	152.3	0	N/A	unknown function
UniRef90	UHGV-0275647_4	UniRef90_A0A1C5TA90	282.0	0	N/A	N/A
eggNOG-mapper	UHGV-0275647_4	1029718.SFBM_0379	139.0	1.89e-39	N/A	N/A
Pfam	UHGV-0275647_4	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0275647_4	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_5	phrog_2118	115.6	4.4e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275647_5	UniRef90_UPI00164D036D	126.0	5.8e-35	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0275647_5	610130.Closa_0730	115.0	1.89e-31	HNH endonuclease	N/A
Pfam	UHGV-0275647_5	PF14279	N/A	N/A	HNH endonuclease	HNH_5
COG	UHGV-0275647_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0275647_5	TIGR02646,COG1403	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0275647_8	411459.RUMOBE_01111	74.3	0.00000000000000718	N/A	N/A
PHROG	UHGV-0275647_9	phrog_1029	290.7	0	N/A	unknown function
UniRef90	UHGV-0275647_9	UniRef90_A0A3D5WKT6	287.0	0	Peptidase S59 domain-containing protein	N/A
eggNOG-mapper	UHGV-0275647_9	1232453.BAIF02000057_gene1140	256.0	0	N/A	N/A
structural_annotation	UHGV-0275647_9	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_10	phrog_997	128.3	4e-38	replication terminator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0275647_10	1232453.BAIF02000057_gene1139	117.0	6.06e-32	N/A	N/A
PHROG	UHGV-0275647_11	phrog_190	102.1	4.9e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275647_11	UniRef90_UPI0002F780B1	107.0	1.63e-26	N/A	N/A
eggNOG-mapper	UHGV-0275647_11	342113.DM82_1124	108.0	1.93e-27	N/A	N/A
Pfam	UHGV-0275647_11	PF06356	N/A	N/A	N/A	DUF1064
PHROG	UHGV-0275647_13	phrog_9804	126.9	1.4e-37	N/A	unknown function
UniRef90	UHGV-0275647_13	UniRef90_A0A1C5T9U7	244.0	0	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0275647_13	585394.RHOM_14005	124.0	1.1e-33	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0275647_13	cluster_137185	117.0	8.21e-36	NA	N/A
Pfam	UHGV-0275647_13	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0275647_13	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_14	phrog_2514	96.0	4.6e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275647_14	UniRef90_UPI001C1E0E19	132.0	2.85e-34	GntR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0275647_14	886379.AEWI01000001_gene1766	155.0	2.38221e-44	N/A	N/A
Pfam	UHGV-0275647_14	PF08279	N/A	N/A	HTH domain	HTH_11
structural_annotation	UHGV-0275647_14	PF09681,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0275647_15	K07455	300.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0275647_15	phrog_148	279.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275647_15	UniRef90_UPI0019575C80	305.0	0	recombination protein RecT	N/A
eggNOG-mapper	UHGV-0275647_15	1226322.HMPREF1545_00015	293.0	0	RecT family	N/A
Pfam	UHGV-0275647_15	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0275647_15	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0275647_15	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0275647_15	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0275647_16	397288.C806_01483	53.1	0.0000000145	N/A	N/A
PHROG	UHGV-0275647_17	phrog_434	321.9	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275647_17	UniRef90_A0A7C6PS99	267.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0275647_17	1121947.AUHK01000002_gene916	264.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0275647_17	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0275647_17	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0275647_17	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0275647_17	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_20	phrog_1123	54.3	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-0275647_20	UniRef90_A0A858BT04	83.2	4.38e-19	DNA gyrase	N/A
eggNOG-mapper	UHGV-0275647_20	411483.FAEPRAA2165_01885	58.9	0.00000000032	N/A	N/A
structural_annotation	UHGV-0275647_20	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0275647_21	UniRef90_A0A1C5T7T8	100.0	3.07e-26	DNA binding domain, excisionase family	N/A
Pfam	UHGV-0275647_21	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0275647_21	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0275647_21	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_22	phrog_5070	147.8	3.64338e-44	N/A	unknown function
UniRef90	UHGV-0275647_22	UniRef90_B0PAM0	124.0	1.56e-32	Bacterial transferase hexapeptide repeat protein	N/A
eggNOG-mapper	UHGV-0275647_22	445972.ANACOL_01820	124.0	2.61e-33	COG NOG06285 non supervised orthologous group	N/A
Pfam	UHGV-0275647_22	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-0275647_22	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
KOfam	UHGV-0275647_24	K23779	59.3	1e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0275647_24	phrog_5823	51.5	0.000000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-0275647_24	UniRef90_A0A822LL88	58.9	0.000000000337	Toxin-antitoxin system antitoxin component Xre family	N/A
eggNOG-mapper	UHGV-0275647_24	936375.HMPREF1152_0655	57.4	0.000000000278	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0275647_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0275647_24	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0275647_25	K01356	141.3	8.89965e-42	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0275647_25	phrog_4	109.3	4.6e-32	transcriptional repressor	transcription regulation
UniRef90	UHGV-0275647_25	UniRef90_UPI001CF8654C	187.0	0	LexA family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0275647_25	706434.HMPREF9429_00405	172.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0275647_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0275647_25	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0275647_25	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0275647_25	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
COG	UHGV-0275647_26	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-0275647_26	PF02805	N/A	N/A	N/A	N/A
KOfam	UHGV-0275647_27	K14059	181.0	0	int; integrase	N/A
PHROG	UHGV-0275647_27	phrog_1	174.7	0	integrase	integration and excision
UniRef90	UHGV-0275647_27	UniRef90_A0A1C5T7N1	741.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0275647_27	1120998.AUFC01000005_gene590	103.0	2.6e-24	DNA integration	N/A
Pfam	UHGV-0275647_27	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0275647_27	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0275647_27	PF00589,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_28	phrog_9428	41.7	0.000000000018	N/A	unknown function
KOfam	UHGV-0275647_29	K08640	105.9	7.1e-34	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0275647_29	phrog_894	71.4	1.2e-20	endolysin	lysis
UniRef90	UHGV-0275647_29	UniRef90_A0A1C5RKK7	281.0	0	Zinc D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-0275647_29	931626.Awo_c26840	109.0	4.87e-27	Peptidase M15	N/A
Pfam	UHGV-0275647_29	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0275647_29	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0275647_29	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0275647_29	PF08291,PF01471,COG3108,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_30	phrog_355	60.4	2.7e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275647_30	UniRef90_A0A8B3A5C7	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-0275647_30	97138.C820_00250	126.0	1.54e-36	N/A	N/A
Pfam	UHGV-0275647_30	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0275647_30	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_31	phrog_263	78.6	4.9e-23	holin	lysis
UniRef90	UHGV-0275647_31	UniRef90_UPI0015A56FE5	93.6	4.97e-23	phage holin	N/A
eggNOG-mapper	UHGV-0275647_31	315750.BPUM_3085	54.3	0.0000000131	SPP1 phage holin	N/A
Pfam	UHGV-0275647_31	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
structural_annotation	UHGV-0275647_31	PF04688	N/A	N/A	N/A	N/A
KOfam	UHGV-0275647_33	K19304	150.3	1.82169e-44	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0275647_33	phrog_22978	606.9	0	N/A	unknown function
UniRef90	UHGV-0275647_33	UniRef90_UPI001CF7F562	1451.0	0	peptidoglycan DD-metalloendopeptidase family protein	N/A
eggNOG-mapper	UHGV-0275647_33	1410633.JHWR01000012_gene87	147.0	1.46e-33	Peptidase family M23	N/A
Pfam	UHGV-0275647_33	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-0275647_33	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-0275647_33	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0275647_33	COG4942	N/A	N/A	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	N/A
PHROG	UHGV-0275647_34	phrog_21397	49.0	0.000000000000081	N/A	unknown function
eggNOG-mapper	UHGV-0275647_34	1203606.HMPREF1526_02741	81.6	0.00000000000000362	N/A	N/A
PHROG	UHGV-0275647_35	phrog_2310	50.1	0.000000000000027	N/A	unknown function
PHROG	UHGV-0275647_39	phrog_24267	93.2	1.6e-27	N/A	unknown function
UniRef90	UHGV-0275647_39	UniRef90_R5LPM8	94.7	4.97e-22	Putative truncated prophage LambdaSa1 minor structural protein	N/A
eggNOG-mapper	UHGV-0275647_39	1123302.KB904167_gene530	111.0	3.86e-26	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-0275647_39	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0275647_39	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_41	phrog_511	226.3	0	internal virion protein	head and packaging
UniRef90	UHGV-0275647_41	UniRef90_A0A8D9UH72	275.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0275647_41	1226322.HMPREF1545_00785	287.0	0	N/A	N/A
structural_annotation	UHGV-0275647_41	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_42	phrog_12105	72.0	7.3e-21	N/A	unknown function
UniRef90	UHGV-0275647_44	UniRef90_UPI001CF901D5	274.0	0	phage baseplate upper protein	N/A
structural_annotation	UHGV-0275647_44	PF20942,TIGR03503,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_45	phrog_15239	93.0	2.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0275647_45	1507.HMPREF0262_03462	57.0	0.00000000656	N/A	N/A
PHROG	UHGV-0275647_46	phrog_1357	287.8	0	major head protein	head and packaging
UniRef90	UHGV-0275647_46	UniRef90_A0A316LK11	381.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0275647_46	1449126.JQKL01000003_gene1695	340.0	0	N/A	N/A
Pfam	UHGV-0275647_46	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0275647_46	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0275647_46	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0275647_47	phrog_13908	225.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0275647_47	1410650.JHWL01000003_gene2831	100.0	7.35e-22	N/A	N/A
Pfam	UHGV-0275647_48	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
PHROG	UHGV-0275647_49	phrog_156	310.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0275647_49	748224.HMPREF9436_01396	481.0	0	N/A	N/A
structural_annotation	UHGV-0275647_49	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0275647_50	K06909	100.0	2.8e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0275647_50	phrog_2	91.0	2.1e-26	terminase large subunit	head and packaging
UniRef90	UHGV-0275647_50	UniRef90_UPI001CF909A5	517.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0275647_50	1410650.JHWL01000003_gene2834	471.0	0	N/A	N/A
Pfam	UHGV-0275647_50	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0275647_50	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0275647_50	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A