UHGV-0275943 (vOTU-031694)

Viral Genome: UHGV-0275943

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0275943
vOTU ID	vOTU-031694
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR1930253_119_68729_round347~1391869
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.88 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9795
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.15
Jumbo phage	No

Genome content
Genome length (bp)	27,626
GC content	46.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	42
CDS density	94%
Average CDS length (bps)	617.86
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0275943_1	665956.HMPREF1032_00102	99.8	5.84e-25	heme binding	N/A
COG	UHGV-0275943_1	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-0275943_2	phrog_4492	58.3	1e-16	tail fiber protein	tail
UniRef90	UHGV-0275943_2	UniRef90_UPI001967E4F4	640.0	0	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-0275943_2	1160721.RBI_I01572	75.5	0.00000000000206	N/A	N/A
Pfam	UHGV-0275943_2	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0275943_2	PF10651,PF04721,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_3	phrog_1067	372.7	0	minor head protein	head and packaging
UniRef90	UHGV-0275943_3	UniRef90_A0A0D8IVK1	914.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0275943_3	1123263.AUKY01000068_gene489	407.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0275943_3	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0275943_3	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0275943_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0275943_3	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_4	phrog_33	57.6	3.9e-16	distal tail protein Dit	tail
UniRef90	UHGV-0275943_4	UniRef90_A0A1C6H6D2	186.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0275943_4	1032362.F6K8S1_9CAUD	112.0	1.52e-27	Phage tail protein	N/A
structural_annotation	UHGV-0275943_4	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_5	phrog_1272	109.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0275943_5	UniRef90_A0A1Y4R6K5	281.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0275943_5	1140001.I571_01843	187.0	0	phage tail tape measure protein	N/A
COG	UHGV-0275943_5	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0275943_5	PF20155,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_7	phrog_88	101.5	8.6e-30	major tail protein	tail
UniRef90	UHGV-0275943_7	UniRef90_G9YSC5	133.0	1.24e-35	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0275943_7	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0275943_7	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0275943_7	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_8	phrog_5	52.3	0.000000000000014	tail completion or Neck1 protein	connector
UniRef90	UHGV-0275943_8	UniRef90_A0A1C6FG30	154.0	5.60519e-45	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0275943_8	908340.HMPREF9406_2573	119.0	4.94e-32	N/A	N/A
NCBIFam	UHGV-0275943_8	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0275943_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_9	phrog_78	44.9	0.0000000000025	tail terminator	connector
eggNOG-mapper	UHGV-0275943_9	1232446.BAIE02000002_gene829	100.0	5.18e-26	N/A	N/A
structural_annotation	UHGV-0275943_9	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_10	phrog_19734	54.9	0.0000000000000016	N/A	unknown function
UniRef90	UHGV-0275943_10	UniRef90_A0A316NL63	111.0	1.44e-29	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0275943_10	1232446.BAIE02000002_gene828	55.1	0.000000041	N/A	N/A
structural_annotation	UHGV-0275943_10	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_11	phrog_2550	57.9	1.3e-16	N/A	unknown function
UniRef90	UHGV-0275943_11	UniRef90_UPI0008717716	69.3	0.000000000000208	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0275943_11	1226322.HMPREF1545_00117	70.9	0.00000000000000886	N/A	N/A
structural_annotation	UHGV-0275943_11	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_12	phrog_10	199.7	0	major head protein	head and packaging
UniRef90	UHGV-0275943_12	UniRef90_UPI000679B959	1058.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0275943_12	1226322.HMPREF1545_00116	640.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0275943_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0275943_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0275943_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0275943_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0275943_13	K06904	148.7	5.46506e-44	N/A	N/A
PHROG	UHGV-0275943_13	phrog_80	168.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0275943_13	UniRef90_A0A0D8IYC2	385.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0275943_13	1226322.HMPREF1545_00115	253.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0275943_13	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0275943_13	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0275943_13	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0275943_13	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_14	phrog_12	196.2	0	portal protein	head and packaging
UniRef90	UHGV-0275943_14	UniRef90_A0A0D8IVL0	806.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0275943_14	1226322.HMPREF1545_00114	535.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0275943_14	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0275943_14	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0275943_14	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0275943_14	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_15	phrog_9	289.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0275943_15	UniRef90_A0A0D8IV16	1192.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0275943_15	1226322.HMPREF1545_00113	900.0	0	Phage Terminase	N/A
Pfam	UHGV-0275943_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0275943_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0275943_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0275943_15	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_16	phrog_361	67.9	1.8e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0275943_16	UniRef90_A0A1C6H6I9	197.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0275943_16	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0275943_16	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0275943_16	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_17	phrog_36	60.3	4.2e-17	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0275943_17	PF07374,TIGR01637	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_19	phrog_2245	94.8	8.1e-28	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0275943_19	UniRef90_A0A4U9RLZ8	76.6	9.21e-16	N/A	N/A
eggNOG-mapper	UHGV-0275943_19	1519439.JPJG01000059_gene1914	70.9	0.0000000000000597	N/A	N/A
PHROG	UHGV-0275943_20	phrog_924	51.5	0.000000000000024	N/A	unknown function
UniRef90	UHGV-0275943_20	UniRef90_UPI00195D1DCA	55.5	0.0000000384	N/A	N/A
Pfam	UHGV-0275943_20	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0275943_20	PF04448,NF041588	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0275943_24	665956.HMPREF1032_03084	103.0	5.32e-28	N/A	N/A
structural_annotation	UHGV-0275943_25	PF06257,NF011232	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_26	phrog_1384	128.5	4.6e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0275943_26	665956.HMPREF1032_03086	306.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0275943_26	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_28	phrog_244	82.6	6.9e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0275943_28	33035.JPJF01000122_gene2460	173.0	0	N/A	N/A
structural_annotation	UHGV-0275943_28	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0275943_30	K02314	266.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0275943_30	phrog_19	263.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275943_30	UniRef90_A0A0W7TNB4	817.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0275943_30	665956.HMPREF1032_02618	681.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0275943_30	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0275943_30	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0275943_30	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0275943_30	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_31	phrog_2514	85.5	7.1e-25	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275943_31	UniRef90_UPI001EE2C20A	86.3	1.37e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0275943_31	665956.HMPREF1032_02617	224.0	0	Phage replisome organizer, N-terminal domain protein	N/A
COG	UHGV-0275943_31	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0275943_31	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-0275943_32	K03111	137.2	1.90001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0275943_32	phrog_44	148.3	4.2039e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275943_32	UniRef90_A0A0W7TNC8	286.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0275943_32	665956.HMPREF1032_00430	195.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0275943_32	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0275943_32	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0275943_32	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0275943_32	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0275943_32	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_33	phrog_7566	85.0	6.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0275943_33	693746.OBV_24070	100.0	2.96e-26	N/A	N/A
PHROG	UHGV-0275943_34	phrog_72	58.7	8.2e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275943_34	UniRef90_UPI001F3F3E5C	87.0	3.11e-18	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0275943_34	1304866.K413DRAFT_1197	90.1	3.58e-20	N/A	N/A
PHROG	UHGV-0275943_35	phrog_14970	237.5	0	N/A	unknown function
UniRef90	UHGV-0275943_35	UniRef90_UPI00123F00F5	228.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0275943_35	411468.CLOSCI_00315	193.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0275943_35	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0275943_35	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0275943_35	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_37	phrog_1029	190.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0275943_37	1203606.HMPREF1526_01890	190.0	0	N/A	N/A
structural_annotation	UHGV-0275943_37	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0275943_38	phrog_997	92.1	6.9e-27	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0275943_38	UniRef90_R6MCS9	116.0	1.98e-31	N/A	N/A
eggNOG-mapper	UHGV-0275943_38	1203606.HMPREF1526_01889	102.0	1.05e-26	replication terminator protein, phage associated	N/A
PHROG	UHGV-0275943_39	phrog_1123	46.1	0.00000000000074	N/A	unknown function
structural_annotation	UHGV-0275943_39	PF02002,MF_01804,NF040939,COG3355	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0275943_40	cluster_35670	148.0	0	NA	N/A
structural_annotation	UHGV-0275943_40	NF042413	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0275943_41	PF12728	N/A	N/A	N/A	N/A
KOfam	UHGV-0275943_42	K07319	252.8	0	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0275943_42	phrog_67	141.2	6.99949e-42	DNA methyltransferase	other
UniRef90	UHGV-0275943_42	UniRef90_UPI001EDCE91E	624.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0275943_42	696281.Desru_0371	457.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0275943_42	MTase_II_00016	246.7	0	Type II methyltransferase	RM
Pfam	UHGV-0275943_42	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0275943_42	COG0863	N/A	N/A	DNA modification methylase	N/A