UHGV-0277553 (vOTU-049969)

Viral Genome: UHGV-0277553

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0277553
vOTU ID	vOTU-049969
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR5106337_141_93555_round347~2616720
Associated BioSample	SAMN13509765
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9824
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	51.62
Jumbo phage	No

Genome content
Genome length (bp)	44,203
GC content	54.83%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	73
CDS density	89%
Average CDS length (bps)	537.86
Total tRNA genes	4
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0277553_1	phrog_9534	51.1	0.000000000000029	head protein	head and packaging
eggNOG-mapper	UHGV-0277553_1	748224.HMPREF9436_00405	110.0	1.25e-24	domain, Protein	N/A
COG	UHGV-0277553_1	COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_2	phrog_3558	191.7	0	tail protein	tail
UniRef90	UHGV-0277553_2	UniRef90_A0A3E2U3C8	158.0	6.84e-38	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0277553_2	411460.RUMTOR_00484	146.0	2.01e-34	Prophage endopeptidase tail	N/A
Pfam	UHGV-0277553_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0277553_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0277553_2	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0277553_2	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0277553_3	UniRef90_A0A417QGC1	118.0	8.09e-29	MtfA protein	N/A
eggNOG-mapper	UHGV-0277553_3	411490.ANACAC_00709	101.0	2.93e-23	phage tail	N/A
COG	UHGV-0277553_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0277553_3	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_4	phrog_28775	118.0	1.5e-36	tail length tape measure protein	tail
UniRef90	UHGV-0277553_4	UniRef90_A0A6N7TLD3	1229.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0277553_4	411470.RUMGNA_02228	129.0	4.31e-28	tape measure	N/A
Pfam	UHGV-0277553_4	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0277553_4	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0277553_4	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0277553_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_7	phrog_885	61.8	9e-18	major tail protein	tail
eggNOG-mapper	UHGV-0277553_7	1111121.HMPREF1247_0789	116.0	6.4e-30	N/A	N/A
structural_annotation	UHGV-0277553_7	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_8	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_9	phrog_17977	41.4	0.000000000019	N/A	unknown function
UniRef90	UHGV-0277553_9	UniRef90_A0A844DHJ8	117.0	9.35e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0277553_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_11	phrog_247	198.6	0	major head protein	head and packaging
UniRef90	UHGV-0277553_11	UniRef90_UPI001BA5448B	252.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0277553_11	33035.JPJF01000106_gene3132	361.0	0	N/A	N/A
structural_annotation	UHGV-0277553_11	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_12	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_14	phrog_5	49.4	0.00000000000012	tail completion or Neck1 protein	connector
UniRef90	UHGV-0277553_14	UniRef90_A0A6N7TNP6	297.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0277553_14	1123309.AQYB01000018_gene814	100.0	4.28e-25	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0277553_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0277553_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_16	phrog_2468	79.3	3.2e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0277553_16	UniRef90_A0A6N7TLR7	639.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0277553_16	1504822.CCNO01000013_gene286	114.0	3.6e-25	cell adhesion	N/A
Pfam	UHGV-0277553_16	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0277553_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_16	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_18	phrog_64	121.1	3.7e-36	portal protein	head and packaging
UniRef90	UHGV-0277553_18	UniRef90_A0A6N7TNT3	901.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0277553_18	642492.Clole_2764	82.4	0.0000000000000561	phage portal protein, SPP1	N/A
Pfam	UHGV-0277553_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0277553_18	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0277553_19	K06909	143.1	2.59941e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0277553_19	phrog_10250	172.8	0	N/A	unknown function
UniRef90	UHGV-0277553_19	UniRef90_A0A844D8I4	845.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0277553_19	411490.ANACAC_00783	491.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0277553_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0277553_19	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0277553_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0277553_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0277553_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0277553_20	UniRef90_UPI0018CC2891	115.0	4.33e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0277553_20	1235790.C805_00037	110.0	5.43e-29	N/A	N/A
structural_annotation	UHGV-0277553_20	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-0277553_21	K06223	50.8	0.0000000000000047	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0277553_21	phrog_56	94.9	9.1e-28	DNA methyltransferase	other
UniRef90	UHGV-0277553_21	UniRef90_UPI001C01192B	527.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0277553_21	1236504.HMPREF2132_01695	214.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0277553_21	MTase_II_00075	60.7	5.8e-29	Type II methyltransferase	RM
Pfam	UHGV-0277553_21	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-0277553_21	PF02086,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_22	phrog_36	40.9	0.000000000035	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0277553_22	PF07374	N/A	N/A	N/A	N/A
KOfam	UHGV-0277553_24	K01160	58.7	1.8e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0277553_24	phrog_34	61.2	2.1e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0277553_24	UniRef90_A0A6N7TND6	224.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0277553_24	875454.BAEW01000002_gene491	136.0	5.84e-40	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0277553_24	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0277553_24	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0277553_24	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_25	phrog_3136	136.0	1.2e-40	N/A	unknown function
UniRef90	UHGV-0277553_25	UniRef90_UPI001C02A61B	317.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0277553_25	388467.A19Y_0909	52.0	0.00000644	ASCH domain	N/A
Pfam	UHGV-0277553_25	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0277553_25	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0277553_25	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_28	phrog_757	179.5	0	DNA methyltransferase	other
UniRef90	UHGV-0277553_28	UniRef90_A0A3E2U1Y9	356.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0277553_28	748224.HMPREF9436_03069	277.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0277553_28	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0277553_28	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_31	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0277553_32	K02086	47.4	0.00000000000032	dnaD; DNA replication protein	N/A
PHROG	UHGV-0277553_32	phrog_186	48.5	0.00000000000018	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0277553_32	UniRef90_A0A564U6B4	99.8	5.2e-26	Replication initiation and membrane attachment	N/A
eggNOG-mapper	UHGV-0277553_32	718252.FP2_01000	66.2	0.00000000000646	N/A	N/A
Pfam	UHGV-0277553_32	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0277553_32	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0277553_32	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-0277553_34	UniRef90_UPI001CBB85F6	117.0	3.76e-30	single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0277553_34	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_35	phrog_2760	179.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0277553_35	UniRef90_A0A3A6EAW6	497.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0277553_35	1235794.C811_01355	158.0	5.1848e-44	RecT family	N/A
Pfam	UHGV-0277553_35	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0277553_35	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0277553_35	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0277553_35	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_36	phrog_674	150.5	1.12104e-44	N/A	unknown function
UniRef90	UHGV-0277553_36	UniRef90_A0A3A6E846	502.0	0	N/A	N/A
eggNOG-mapper	UHGV-0277553_36	556268.OFAG_00840	84.0	6.98e-16	N/A	N/A
Pfam	UHGV-0277553_36	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0277553_36	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_37	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_38	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_39	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_41	phrog_4433	154.3	0	N/A	unknown function
UniRef90	UHGV-0277553_41	UniRef90_UPI00045B9709	89.4	1.75e-18	collagen-like protein	N/A
eggNOG-mapper	UHGV-0277553_41	106648.BBLJ01000054_gene3814	100.0	3.54e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0277553_41	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0277553_42	phrog_15946	77.6	2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0277553_42	1041147.AUFB01000014_gene330	55.1	0.000000549	N/A	N/A
PHROG	UHGV-0277553_43	phrog_4652	93.0	6.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0277553_43	397290.C810_01459	159.0	0	N/A	N/A
structural_annotation	UHGV-0277553_43	TIGR02582,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0277553_44	K07741	138.9	7.39998e-41	antB; anti-repressor protein	N/A
PHROG	UHGV-0277553_44	phrog_63	116.9	1.9e-34	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0277553_44	UniRef90_A0A6N7TLD1	284.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0277553_44	1230342.CTM_16892	216.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0277553_44	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0277553_44	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0277553_44	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0277553_44	PF03374,PF08346,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0277553_45	UniRef90_UPI0018995761	75.9	8.19e-17	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0277553_45	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_46	phrog_8	46.1	0.000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0277553_46	UniRef90_A0A2N2CQC6	81.3	2.48e-17	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0277553_46	1226322.HMPREF1545_00148	72.0	0.0000000000000109	Transcriptional	N/A
Pfam	UHGV-0277553_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0277553_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0277553_46	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_49	phrog_888	67.1	4.7e-35	N/A	unknown function
UniRef90	UHGV-0277553_49	UniRef90_A0A6N7TMA2	432.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-0277553_49	999411.HMPREF1092_03312	83.2	2.54e-16	Short C-terminal domain	N/A
Pfam	UHGV-0277553_49	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-0277553_49	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0277553_49	PF15947,PF14471	N/A	N/A	N/A	N/A
UniRef90	UHGV-0277553_52	UniRef90_A0A6N7TLT0	367.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0277553_52	266265.Bxe_A3948	51.2	0.00000254	Helix-turn-helix domain	N/A
Pfam	UHGV-0277553_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0277553_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0277553_52	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0277553_53	K14059	138.4	8.30003e-41	int; integrase	N/A
PHROG	UHGV-0277553_53	phrog_1	163.0	0	integrase	integration and excision
UniRef90	UHGV-0277553_53	UniRef90_A0A6N7TNQ4	737.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0277553_53	411471.SUBVAR_05137	259.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0277553_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0277553_53	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0277553_53	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0277553_55	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_56	phrog_20016	198.3	0	N/A	unknown function
UniRef90	UHGV-0277553_56	UniRef90_A0A285PT46	213.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0277553_56	1226322.HMPREF1545_00077	181.0	0	N/A	N/A
structural_annotation	UHGV-0277553_56	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_57	phrog_16490	195.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0277553_57	397290.C810_01328	111.0	6.63e-26	N/A	N/A
PHROG	UHGV-0277553_58	phrog_22984	70.1	3e-20	N/A	unknown function
PHROG	UHGV-0277553_59	phrog_21718	87.9	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0277553_59	397290.C810_05210	80.1	8.11e-17	N/A	N/A
PHROG	UHGV-0277553_60	phrog_3754	97.2	1.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0277553_60	1235790.C805_00054	113.0	9.56e-31	N/A	N/A
eggNOG-mapper	UHGV-0277553_62	1235802.C823_04625	53.1	0.000000687	N/A	N/A
structural_annotation	UHGV-0277553_62	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_64	phrog_5765	60.3	2.1e-17	N/A	unknown function
UniRef90	UHGV-0277553_64	UniRef90_UPI001D0EF465	67.4	0.000000000000077	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0277553_64	1095750.HMPREF9970_1008	57.4	0.0000000000849	N/A	N/A
NCBIFam	UHGV-0277553_64	NF033495.1	N/A	N/A	BC1881 family protein	N/A
UniRef90	UHGV-0277553_68	UniRef90_UPI0018835F0C	530.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0277553_68	411483.FAEPRAA2165_00757	164.0	1.54143e-43	N/A	N/A
structural_annotation	UHGV-0277553_68	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_69	phrog_15303	114.6	4.4e-34	N/A	unknown function
Pfam	UHGV-0277553_69	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-0277553_71	K07273	169.7	0	acm; lysozyme	N/A
PHROG	UHGV-0277553_71	phrog_291	116.6	2.5e-34	endolysin	lysis
UniRef90	UHGV-0277553_71	UniRef90_A0A564U0D3	420.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0277553_71	718252.FP2_04890	253.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0277553_71	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0277553_71	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0277553_71	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0277553_72	phrog_1382	50.9	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0277553_72	33035.JPJF01000043_gene998	47.0	0.00000141	N/A	N/A