UHGV-0278611 (vOTU-049982)

Viral Genome: UHGV-0278611

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0278611
vOTU ID	vOTU-049982
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_615521_round14~1934855
Associated BioSample	SAMN07606228
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	50.21
Jumbo phage	No

Genome content
Genome length (bp)	43,409
GC content	40.82%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	68
CDS density	93%
Average CDS length (bps)	592.15
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0278611_1	476272.RUMHYD_00002	82.8	0.0000000000000933	N/A	N/A
PHROG	UHGV-0278611_2	phrog_2310	43.6	0.0000000000031	N/A	unknown function
PHROG	UHGV-0278611_3	phrog_9589	73.1	3.9e-21	endolysin	lysis
UniRef90	UHGV-0278611_3	UniRef90_A0A6N9LGV5	464.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0278611_3	1123075.AUDP01000020_gene1533	319.0	0	pathogenesis	N/A
Pfam	UHGV-0278611_3	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0278611_3	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0278611_3	PF08230,PF19087	N/A	N/A	N/A	N/A
KOfam	UHGV-0278611_4	K14059	104.0	2.2e-30	int; integrase	N/A
PHROG	UHGV-0278611_4	phrog_1	123.7	2e-36	integrase	integration and excision
UniRef90	UHGV-0278611_4	UniRef90_A0A6L8SXX0	719.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0278611_4	1235792.C808_05256	368.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0278611_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0278611_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0278611_4	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_5	phrog_8545	60.8	2.2e-17	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0278611_5	UniRef90_UPI001C0EAFDF	199.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0278611_5	1304866.K413DRAFT_0836	162.0	0	tRNA_anti-like	N/A
Pfam	UHGV-0278611_5	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0278611_5	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-0278611_7	K22300	53.3	0.0000000000000064	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0278611_7	phrog_8	67.8	2.5e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0278611_7	UniRef90_A0A8J8SBE0	86.3	1.34e-19	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0278611_7	706434.HMPREF9429_00594	75.1	8.52e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0278611_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0278611_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0278611_8	UniRef90_A0A3R6RM60	62.0	0.0000000000338	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0278611_8	1298920.KI911353_gene527	55.5	0.00000000382	N/A	N/A
structural_annotation	UHGV-0278611_8	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_11	phrog_6058	54.7	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0278611_11	742733.HMPREF9469_05094	73.2	0.00000000000000125	N/A	N/A
AcrCatalog	UHGV-0278611_12	cluster_17974	60.1	0.00000000000000106	NA	N/A
PHROG	UHGV-0278611_16	phrog_253	116.1	2.8e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278611_16	UniRef90_UPI001030DCF8	184.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0278611_16	411470.RUMGNA_02192	172.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-0278611_16	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0278611_16	PF05565	N/A	N/A	N/A	N/A
UniRef90	UHGV-0278611_17	UniRef90_R6RDX0	75.5	1.24e-16	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-0278611_18	phrog_2872	164.8	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278611_18	UniRef90_A0A8F2J9K2	297.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0278611_18	1304866.K413DRAFT_0827	224.0	0	AAA domain	N/A
Pfam	UHGV-0278611_18	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0278611_18	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_20	phrog_18107	128.7	4.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-0278611_20	476272.RUMHYD_02831	195.0	0	N/A	N/A
structural_annotation	UHGV-0278611_20	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_21	phrog_3490	114.8	7e-34	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278611_21	UniRef90_A0A173R9N6	283.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0278611_21	476272.RUMHYD_02832	283.0	0	ERCC4 domain	N/A
Pfam	UHGV-0278611_21	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-0278611_21	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-0278611_21	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_22	phrog_1313	380.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278611_22	UniRef90_UPI001655DAE1	705.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-0278611_22	500632.CLONEX_03568	306.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0278611_22	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-0278611_22	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
Pfam	UHGV-0278611_22	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0278611_22	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0278611_22	PF05272,PF09250,PF08708,MF_00016,NF011296,COG5545	N/A	N/A	N/A	N/A
UniRef90	UHGV-0278611_24	UniRef90_A0A6L8SWV5	144.0	2.45227e-43	Winged helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0278611_24	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
COG	UHGV-0278611_24	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0278611_24	PF01726,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_25	phrog_17690	126.8	8.3e-38	N/A	unknown function
eggNOG-mapper	UHGV-0278611_25	476272.RUMHYD_03925	158.0	0	N/A	N/A
PHROG	UHGV-0278611_28	phrog_20593	51.3	0.000000000000018	N/A	unknown function
UniRef90	UHGV-0278611_29	UniRef90_A0A3E5ENM1	134.0	3.19e-39	N/A	N/A
eggNOG-mapper	UHGV-0278611_29	1128111.HMPREF0870_00767	81.3	3.97e-19	N/A	N/A
Pfam	UHGV-0278611_29	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-0278611_29	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278611_29	PF07866,TIGR02450,COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278611_30	PF06107,COG4481	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0278611_34	1235790.C805_00035	58.9	0.00000000426	N/A	N/A
PHROG	UHGV-0278611_37	phrog_10714	42.8	0.0000000000084	N/A	unknown function
eggNOG-mapper	UHGV-0278611_37	537007.BLAHAN_05460	53.9	0.0000000282	N/A	N/A
eggNOG-mapper	UHGV-0278611_38	411459.RUMOBE_01385	53.9	0.0000000457	N/A	N/A
AcrCatalog	UHGV-0278611_38	cluster_11670	41.6	0.0000001	NA	N/A
KOfam	UHGV-0278611_39	K06909	387.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0278611_39	phrog_3717	148.1	4.48416e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0278611_39	UniRef90_A0A6L8SYJ6	886.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0278611_39	33035.JPJF01000106_gene3136	508.0	0	Terminase small subunit	N/A
Pfam	UHGV-0278611_39	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0278611_39	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0278611_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0278611_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0278611_39	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0278611_40	411473.RUMCAL_02525	143.0	5.53513e-43	N/A	N/A
PHROG	UHGV-0278611_41	phrog_533	268.9	0	portal protein	head and packaging
UniRef90	UHGV-0278611_41	UniRef90_A0A1C6CDM8	657.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0278611_41	33035.JPJF01000106_gene3135	484.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0278611_41	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_42	phrog_581	269.5	0	minor head protein	head and packaging
UniRef90	UHGV-0278611_42	UniRef90_A0A395X791	767.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0278611_42	476272.RUMHYD_01761	425.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0278611_42	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0278611_42	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278611_42	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_43	phrog_3754	114.1	9.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0278611_43	476272.RUMHYD_01764	167.0	0	N/A	N/A
UniRef90	UHGV-0278611_44	UniRef90_A0A395X7A4	179.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0278611_44	476272.RUMHYD_01766	120.0	2.16e-34	N/A	N/A
PHROG	UHGV-0278611_45	phrog_21718	130.8	6.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0278611_45	397290.C810_05210	127.0	5.52e-35	N/A	N/A
PHROG	UHGV-0278611_46	phrog_22984	96.9	1.2e-28	N/A	unknown function
PHROG	UHGV-0278611_47	phrog_16490	191.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0278611_47	397290.C810_01328	125.0	1.14e-31	N/A	N/A
PHROG	UHGV-0278611_48	phrog_374	209.6	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278611_48	UniRef90_A0A0H3N242	201.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0278611_48	742767.HMPREF9456_02044	196.0	0	N/A	N/A
structural_annotation	UHGV-0278611_48	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_49	phrog_20016	207.2	0	N/A	unknown function
UniRef90	UHGV-0278611_49	UniRef90_A0A285PT46	170.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0278611_49	397290.C810_05214	187.0	0	N/A	N/A
structural_annotation	UHGV-0278611_49	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_50	phrog_28802	224.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0278611_50	476272.RUMHYD_01772	200.0	0	N/A	N/A
PHROG	UHGV-0278611_51	phrog_194	65.8	9e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0278611_51	UniRef90_UPI001D14C9C8	195.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0278611_51	476272.RUMHYD_01775	192.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0278611_51	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0278611_52	phrog_544	162.7	0	major head protein	head and packaging
UniRef90	UHGV-0278611_52	UniRef90_A0A395X7A1	666.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0278611_52	1232453.BAIF02000011_gene3359	391.0	0	N/A	N/A
Pfam	UHGV-0278611_52	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0278611_52	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_53	phrog_541	95.6	2.8e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0278611_53	476272.RUMHYD_01778	111.0	5e-29	N/A	N/A
PHROG	UHGV-0278611_55	phrog_1129	76.5	2.4e-22	holin	lysis
UniRef90	UHGV-0278611_55	UniRef90_A0A395X7B2	174.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0278611_55	411461.DORFOR_00721	113.0	7.19e-32	N/A	N/A
Pfam	UHGV-0278611_55	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0278611_55	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_57	phrog_8680	241.5	0	N/A	unknown function
UniRef90	UHGV-0278611_57	UniRef90_UPI001C0F342A	437.0	0	N/A	N/A
eggNOG-mapper	UHGV-0278611_57	411470.RUMGNA_02208	278.0	0	N/A	N/A
Pfam	UHGV-0278611_57	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0278611_57	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_58	phrog_3366	98.4	6.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0278611_58	476272.RUMHYD_01779	156.0	0	N/A	N/A
structural_annotation	UHGV-0278611_58	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_59	phrog_556	66.9	2.4e-19	minor head protein	head and packaging
UniRef90	UHGV-0278611_59	UniRef90_UPI000E4989EB	275.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0278611_59	476272.RUMHYD_01780	149.0	3.92364e-44	N/A	N/A
Pfam	UHGV-0278611_59	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0278611_59	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_60	phrog_3266	92.0	5.2e-27	tail completion	connector
eggNOG-mapper	UHGV-0278611_60	476272.RUMHYD_01781	150.0	3.08286e-44	N/A	N/A
structural_annotation	UHGV-0278611_60	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_61	phrog_3099	131.3	6.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0278611_61	411902.CLOBOL_00129	173.0	0	N/A	N/A
structural_annotation	UHGV-0278611_61	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_62	phrog_11299	67.9	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0278611_62	411459.RUMOBE_01382	60.1	0.00000000151	N/A	N/A
structural_annotation	UHGV-0278611_62	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_63	phrog_706	130.5	1.3e-38	N/A	unknown function
UniRef90	UHGV-0278611_63	UniRef90_UPI001BAD00AD	211.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0278611_63	411459.RUMOBE_01383	328.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0278611_63	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0278611_63	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_64	phrog_1535	498.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0278611_64	UniRef90_A0A173R880	844.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0278611_64	476272.RUMHYD_01785	833.0	0	phage tail tape measure protein	N/A
COG	UHGV-0278611_64	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278611_64	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_65	phrog_1194	87.7	1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0278611_65	394503.Ccel_3034	54.7	0.0000000783	N/A	N/A
structural_annotation	UHGV-0278611_65	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_66	phrog_6616	649.7	0	tail protein	tail
UniRef90	UHGV-0278611_66	UniRef90_UPI00156E2BA6	692.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0278611_66	33035.JPJF01000043_gene1002	251.0	0	N/A	N/A
structural_annotation	UHGV-0278611_66	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0278611_67	phrog_18444	74.2	1.2e-21	N/A	unknown function
UniRef90	UHGV-0278611_67	UniRef90_UPI00156E9A45	73.2	9.66e-16	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0278611_68	349123.Lreu23DRAFT_3172	60.1	0.000000088	N/A	N/A
structural_annotation	UHGV-0278611_68	PF08931	N/A	N/A	N/A	N/A