UHGV-0284193 (vOTU-144361)

Viral Genome: UHGV-0284193

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0284193
vOTU ID	vOTU-144361
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR9040464_141_46189_round8-12~1051325
Associated BioSample	SAMN11391639
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.12 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9735
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.92
Jumbo phage	No

Genome content
Genome length (bp)	24,948
GC content	32.17%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	29
CDS density	92%
Average CDS length (bps)	789.72
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0284193_2	phrog_5423	59.3	6.2e-17	N/A	unknown function
PHROG	UHGV-0284193_4	phrog_2277	52.2	0.0000000000000071	N/A	unknown function
eggNOG-mapper	UHGV-0284193_4	1122146.AUHP01000011_gene254	55.8	0.00000000103	N/A	N/A
PHROG	UHGV-0284193_7	phrog_2343	96.8	9.8e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0284193_7	UniRef90_UPI0004ACBBBB	87.4	2.23e-20	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0284193_7	1408438.JADD01000021_gene406	87.4	5.04e-21	N/A	N/A
Pfam	UHGV-0284193_7	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0284193_7	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_8	phrog_9	314.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0284193_8	UniRef90_UPI0004806741	669.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0284193_8	1408438.JADD01000021_gene407	669.0	0	Phage Terminase	N/A
Pfam	UHGV-0284193_8	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0284193_8	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0284193_8	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0284193_8	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_9	phrog_12	88.0	8.5e-26	portal protein	head and packaging
UniRef90	UHGV-0284193_9	UniRef90_W1Q2L9	318.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0284193_9	592010.GCWU000182_001484	318.0	0	Phage portal protein	N/A
Pfam	UHGV-0284193_9	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0284193_9	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0284193_9	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0284193_10	K01358	143.2	2.40042e-42	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0284193_10	phrog_94	211.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0284193_10	UniRef90_A0A233W5S0	441.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0284193_10	592010.GCWU000182_001485	194.0	0	Clp protease	N/A
Pfam	UHGV-0284193_10	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0284193_10	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0284193_10	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_11	phrog_10	93.0	3.2e-27	major head protein	head and packaging
UniRef90	UHGV-0284193_11	UniRef90_A0A233W5Q9	751.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0284193_11	565653.EGBG_01970	462.0	0	Phage capsid family	N/A
Pfam	UHGV-0284193_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0284193_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0284193_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0284193_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_12	phrog_749	81.1	9.8e-24	N/A	unknown function
UniRef90	UHGV-0284193_12	UniRef90_UPI001F192A97	68.2	0.000000000000787	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0284193_12	592010.GCWU000182_001487	67.8	0.000000000000122	N/A	N/A
UniRef90	UHGV-0284193_13	UniRef90_UPI0004B234D6	95.5	3.44e-23	phage head closure protein	N/A
eggNOG-mapper	UHGV-0284193_13	1408438.JADD01000021_gene412	95.5	5.77e-24	N/A	N/A
structural_annotation	UHGV-0284193_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_14	phrog_15828	56.3	4.9e-16	N/A	unknown function
structural_annotation	UHGV-0284193_14	PF06141	N/A	N/A	N/A	N/A
UniRef90	UHGV-0284193_15	UniRef90_W1Q5X5	151.0	2.94273e-44	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0284193_15	592010.GCWU000182_001490	151.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-0284193_15	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_16	phrog_88	51.0	0.000000000000023	major tail protein	tail
UniRef90	UHGV-0284193_16	UniRef90_UPI00101D6026	179.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0284193_16	1408438.JADD01000021_gene415	265.0	0	N/A	N/A
structural_annotation	UHGV-0284193_16	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_17	phrog_16464	87.6	1.3e-25	N/A	unknown function
PHROG	UHGV-0284193_18	phrog_1293	528.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0284193_18	UniRef90_A0A233W5U9	1971.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0284193_18	592010.GCWU000182_001494	478.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0284193_18	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0284193_18	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0284193_18	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0284193_18	PF10145,PF05384,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_19	phrog_33	69.9	5.3e-20	distal tail protein Dit	tail
UniRef90	UHGV-0284193_19	UniRef90_A8U7X9	178.0	0	Prophage LambdaSa04, tail protein, putative	N/A
eggNOG-mapper	UHGV-0284193_19	592010.GCWU000182_001495	122.0	2.75e-31	N/A	N/A
structural_annotation	UHGV-0284193_19	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0284193_20	K13582	41.6	0.0000000000094	podJ; localization factor PodJL	N/A
PHROG	UHGV-0284193_20	phrog_1330	100.8	6e-38	tail protein	tail
eggNOG-mapper	UHGV-0284193_20	1408438.JADD01000021_gene420	87.4	0.0000000000000101	Phage minor structural protein	N/A
COG	UHGV-0284193_20	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0284193_24	phrog_17134	86.5	2e-25	N/A	unknown function
Pfam	UHGV-0284193_24	PF12789	N/A	N/A	Phage tail repeat like	PTR
COG	UHGV-0284193_24	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-0284193_24	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0284193_28	K01448	107.6	1.3e-31	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0284193_28	phrog_435	120.6	1.3e-35	endolysin	lysis
UniRef90	UHGV-0284193_28	UniRef90_A0A233VXT5	589.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0284193_28	875454.BAEW01000031_gene1821	181.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0284193_28	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0284193_28	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0284193_28	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0284193_29	phrog_881	71.3	8.3e-21	holin	lysis
UniRef90	UHGV-0284193_29	UniRef90_A0A133N4A6	90.9	1e-22	Holin family protein	N/A
eggNOG-mapper	UHGV-0284193_29	1321782.HMPREF1986_02282	77.0	5.18e-18	Putative phage holin Dp-1	N/A
Pfam	UHGV-0284193_29	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0284193_29	PF16938	N/A	N/A	N/A	N/A