UHGV-0287793 (vOTU-154384)

Viral Genome: UHGV-0287793

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0287793
vOTU ID	vOTU-154384
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_7052_round13~5836867
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.86 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	27
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9781
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	43.71
Jumbo phage	No

Genome content
Genome length (bp)	22,043
GC content	37.92%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	92%
Average CDS length (bps)	439.17
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0287793_1	phrog_1293	339.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0287793_1	UniRef90_UPI0008A558FB	281.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0287793_1	1282664.H354_07735	345.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0287793_1	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0287793_1	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0287793_1	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0287793_3	phrog_187	62.9	5.5e-18	head-tail adaptor	connector
UniRef90	UHGV-0287793_3	UniRef90_A0A139NGQ9	145.0	1.24716e-43	Putative phage protein	N/A
UniRef90	UHGV-0287793_4	UniRef90_A0A1F1DLF7	392.0	0	N/A	N/A
Pfam	UHGV-0287793_4	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0287793_4	PF11611,MF_00791,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_5	phrog_88	107.8	1e-31	major tail protein	tail
UniRef90	UHGV-0287793_5	UniRef90_K8MEB4	384.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-0287793_5	1035189.HMPREF9954_1930	203.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0287793_5	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0287793_5	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0287793_5	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_6	phrog_78	80.7	1.9e-23	tail terminator	connector
UniRef90	UHGV-0287793_6	UniRef90_A0A139RIS6	191.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0287793_6	999425.HMPREF9186_02040	248.0	0	N/A	N/A
structural_annotation	UHGV-0287793_6	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_7	phrog_5	42.3	0.000000000019	tail completion or Neck1 protein	connector
UniRef90	UHGV-0287793_7	UniRef90_A0A139RIK3	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-0287793_7	565653.EGBG_01973	86.3	7.83e-20	N/A	N/A
structural_annotation	UHGV-0287793_7	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_8	phrog_25	43.7	0.0000000000046	head closure Hc1	connector
UniRef90	UHGV-0287793_8	UniRef90_A0A8B1YLH5	228.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0287793_8	999425.HMPREF9186_02038	254.0	0	N/A	N/A
structural_annotation	UHGV-0287793_8	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_9	phrog_933	54.7	0.0000000000000016	N/A	unknown function
PHROG	UHGV-0287793_10	phrog_749	101.9	3.3e-30	N/A	unknown function
UniRef90	UHGV-0287793_10	UniRef90_A0A8B1YLI6	152.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0287793_10	999425.HMPREF9186_02036	185.0	0	N/A	N/A
structural_annotation	UHGV-0287793_10	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_11	phrog_10	131.8	7.2e-39	major head protein	head and packaging
UniRef90	UHGV-0287793_11	UniRef90_A0A4D6B0J4	706.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0287793_11	999425.HMPREF9186_02035	679.0	0	Phage capsid family	N/A
Pfam	UHGV-0287793_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0287793_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0287793_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0287793_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0287793_12	K01358	128.4	7.5e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0287793_12	phrog_94	241.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0287793_12	UniRef90_A0A428HZ00	476.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0287793_12	999425.HMPREF9186_02034	493.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0287793_12	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0287793_12	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0287793_12	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_13	phrog_12	149.1	2.66247e-44	portal protein	head and packaging
UniRef90	UHGV-0287793_13	UniRef90_A0A4D6B0L6	747.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0287793_13	999425.HMPREF9186_02033	748.0	0	portal protein	N/A
Pfam	UHGV-0287793_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0287793_13	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0287793_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0287793_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_14	phrog_903	70.4	1.2e-20	N/A	unknown function
PHROG	UHGV-0287793_15	phrog_9	279.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0287793_15	UniRef90_X8K5U6	981.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0287793_15	999425.HMPREF9186_02031	1091.0	0	Terminase	N/A
Pfam	UHGV-0287793_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0287793_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0287793_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0287793_15	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_16	phrog_2343	139.3	6.89999e-42	terminase small subunit	head and packaging
UniRef90	UHGV-0287793_16	UniRef90_A0A5C5TE72	89.4	7.81e-21	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0287793_16	999425.HMPREF9186_02030	218.0	0	N/A	N/A
structural_annotation	UHGV-0287793_16	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0287793_17	K04763	111.2	1.4e-32	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0287793_17	phrog_216	183.9	0	integrase	integration and excision
UniRef90	UHGV-0287793_17	UniRef90_A0A4D6AD72	366.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-0287793_17	999425.HMPREF9186_02028	367.0	0	Phage integrase family	N/A
Pfam	UHGV-0287793_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0287793_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0287793_17	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0287793_18	UniRef90_K8MR92	290.0	0	RinA family phage transcriptional regulator	N/A
NCBIFam	UHGV-0287793_18	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0287793_18	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_19	phrog_29132	106.0	1.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0287793_21	1121865.OMW_01950	58.9	0.000000000219	N/A	N/A
structural_annotation	UHGV-0287793_21	PF18300,NF033216,COG4568	N/A	N/A	N/A	N/A
UniRef90	UHGV-0287793_22	UniRef90_F9PY74	80.5	3.07e-19	Conserved domain protein	N/A
PHROG	UHGV-0287793_23	phrog_3606	54.4	0.0000000000000023	N/A	unknown function
AcrCatalog	UHGV-0287793_23	cluster_1646	35.8	0.000000898	NA	N/A
PHROG	UHGV-0287793_24	phrog_8899	250.5	0	N/A	unknown function
UniRef90	UHGV-0287793_24	UniRef90_A0A139N1V3	218.0	0	N/A	N/A
PHROG	UHGV-0287793_25	phrog_98	79.4	5.3e-23	N/A	unknown function
UniRef90	UHGV-0287793_25	UniRef90_A0A4Q2FAR1	371.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0287793_25	585203.SMSK564_1299	69.3	0.00000000000714	N/A	N/A
Pfam	UHGV-0287793_25	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0287793_25	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
PHROG	UHGV-0287793_26	phrog_7136	58.4	1.4e-16	N/A	unknown function
PHROG	UHGV-0287793_27	phrog_121	137.0	1.10001e-40	N/A	unknown function
UniRef90	UHGV-0287793_27	UniRef90_UPI0007795EF6	249.0	0	N/A	N/A
eggNOG-mapper	UHGV-0287793_27	365659.smi_0429	159.0	0	N/A	N/A
Pfam	UHGV-0287793_27	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-0287793_27	PF07852	N/A	N/A	N/A	N/A
UniRef90	UHGV-0287793_28	UniRef90_UPI0003FBCA67	82.0	1.51e-18	N/A	N/A
PHROG	UHGV-0287793_29	phrog_1374	40.7	0.000000000028	N/A	unknown function
PHROG	UHGV-0287793_30	phrog_13581	136.1	8.99998e-41	N/A	unknown function
eggNOG-mapper	UHGV-0287793_30	365659.smi_0431	135.0	1.03e-39	N/A	N/A
PHROG	UHGV-0287793_31	phrog_954	249.7	0	DNA methyltransferase	other
UniRef90	UHGV-0287793_31	UniRef90_A0A1F0KCQ3	344.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0287793_31	1054460.SPPN_00315	303.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-0287793_31	oMTase_00019	280.1	0	orphan methyltransferase	RM
Pfam	UHGV-0287793_31	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0287793_31	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0287793_31	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_32	phrog_2715	236.2	0	N/A	unknown function
UniRef90	UHGV-0287793_32	UniRef90_U4KJB3	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0287793_32	1095737.HMPREF1110_1214	290.0	0	N/A	N/A
structural_annotation	UHGV-0287793_32	PF18406	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_33	phrog_1992	163.2	0	MazG-like pyrophosphatase	other
UniRef90	UHGV-0287793_33	UniRef90_A0A1F0KA74	313.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0287793_33	999425.HMPREF9186_02016	316.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-0287793_33	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0287793_33	PF08761,COG4508	N/A	N/A	N/A	N/A
UniRef90	UHGV-0287793_34	UniRef90_A0A1F0KB48	172.0	0	HTH cro/C1-type domain-containing protein	N/A
PHROG	UHGV-0287793_35	phrog_1580	123.1	6.6e-37	N/A	unknown function
KOfam	UHGV-0287793_36	K02086	73.9	2.1e-21	dnaD; DNA replication protein	N/A
PHROG	UHGV-0287793_36	phrog_5968	190.9	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0287793_36	UniRef90_K8MKF4	523.0	0	DnaD and phage-associated domain-containing protein	N/A
eggNOG-mapper	UHGV-0287793_36	999425.HMPREF9186_02013	523.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0287793_36	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-0287793_36	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0287793_36	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0287793_36	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0287793_36	PF09681,TIGR01714,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0287793_37	K03111	149.2	4.2039e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0287793_37	phrog_44	177.7	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0287793_37	UniRef90_A0A428HZ61	261.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0287793_37	999425.HMPREF9186_02012	220.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0287793_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0287793_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0287793_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0287793_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0287793_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_38	phrog_236	92.9	6.8e-27	nucleotide kinase	other
UniRef90	UHGV-0287793_38	UniRef90_UPI00189C4320	210.0	0	N/A	N/A
eggNOG-mapper	UHGV-0287793_38	999425.HMPREF9186_02011	145.0	2.66247e-44	N/A	N/A
Pfam	UHGV-0287793_38	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0287793_42	phrog_5866	151.6	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0287793_42	UniRef90_A0A4Q2FFR2	180.0	0	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0287793_42	35344.A0A097PAT8_BPT12	101.0	8.28e-27	N/A	N/A
structural_annotation	UHGV-0287793_42	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_43	phrog_28560	96.4	1.7e-28	N/A	unknown function
PHROG	UHGV-0287793_45	phrog_463	99.4	4.3e-29	anti-repressor	transcription regulation
UniRef90	UHGV-0287793_45	UniRef90_K8MKE3	271.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0287793_45	999425.HMPREF9186_02003	271.0	0	ORF6C domain	N/A
Pfam	UHGV-0287793_45	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0287793_45	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0287793_45	PF10552	N/A	N/A	N/A	N/A
PHROG	UHGV-0287793_46	phrog_1733	307.1	0	N/A	unknown function
UniRef90	UHGV-0287793_46	UniRef90_A0A8B1YLF4	468.0	0	N/A	N/A
eggNOG-mapper	UHGV-0287793_46	646413.C5IUM1_9CAUD	229.0	0	N/A	N/A
Pfam	UHGV-0287793_46	PF11300	N/A	N/A	N/A	DUF3102
structural_annotation	UHGV-0287793_46	PF11300,NF038070	N/A	N/A	N/A	N/A