UHGV-0290045 (vOTU-117667)

Viral Genome: UHGV-0290045

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0290045
vOTU ID	vOTU-117667
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_386195_round1256~5726543
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	73.48 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	24
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9704
Virus hallmark genes (geNomad)	14
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	43.2
Jumbo phage	No

Genome content
Genome length (bp)	33,773
GC content	38.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	52
CDS density	97%
Average CDS length (bps)	629.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0290045_1	UniRef90_A0A090I0A8	132.0	9.02e-39	Putative membrane protein	N/A
eggNOG-mapper	UHGV-0290045_1	1280390.CBQR020000098_gene2217	63.5	0.00000000000305	N/A	N/A
UniRef90	UHGV-0290045_2	UniRef90_F0H2C5	108.0	4.15e-29	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0290045_2	1118057.CAGX01000020_gene1589	180.0	0	N/A	N/A
KOfam	UHGV-0290045_3	K01448	102.5	4.8e-30	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0290045_3	phrog_12727	161.9	0	endolysin	lysis
UniRef90	UHGV-0290045_3	UniRef90_UPI0002EDF506	833.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0290045_3	1118057.CAGX01000020_gene1590	833.0	0	mannosyl-glycoprotein	N/A
Pfam	UHGV-0290045_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0290045_3	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0290045_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0290045_3	PF01520,PF01832,MF_00562,TIGR02883,NF009355,COG0860,COG1705	N/A	N/A	N/A	N/A
KOfam	UHGV-0290045_5	K19721	48.6	0.000000000000035	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0290045_5	phrog_35286	66.1	4.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0290045_5	862517.HMPREF9225_1624	179.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0290045_5	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
Pfam	UHGV-0290045_5	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0290045_5	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-0290045_6	phrog_5056	62.6	3.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0290045_6	665950.HMPREF1025_02516	47.4	0.000000822	N/A	N/A
PHROG	UHGV-0290045_7	phrog_5056	66.7	1.6e-19	N/A	unknown function
PHROG	UHGV-0290045_9	phrog_36643	337.5	0	N/A	unknown function
UniRef90	UHGV-0290045_9	UniRef90_E0NN89	628.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0290045_9	862517.HMPREF9225_1628	628.0	0	N/A	N/A
KOfam	UHGV-0290045_10	K06871	247.1	0	N/A	N/A
PHROG	UHGV-0290045_10	phrog_1802	134.2	1.1e-39	radical SAM domain-containing protein	other
UniRef90	UHGV-0290045_10	UniRef90_G4D5F4	445.0	0	Radical SAM core domain-containing protein	N/A
eggNOG-mapper	UHGV-0290045_10	997350.HMPREF9129_1634	445.0	0	Six-Cys-in-45 modification radical SAM protein	N/A
PADLOC	UHGV-0290045_10	pVip-lone	62.3	8.6e-18	Viperins not associated with kinases	Viperin
Pfam	UHGV-0290045_10	PF04055	N/A	N/A	Radical SAM superfamily	Radical_SAM
NCBIFam	UHGV-0290045_10	TIGR04085.1	N/A	N/A	SPASM domain-containing protein	N/A
COG	UHGV-0290045_10	COG0641	N/A	N/A	Sulfatase maturation enzyme AslB, radical SAM superfamily	N/A
structural_annotation	UHGV-0290045_10	PF04055,MF_00660,TIGR04136,COG0641	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0290045_11	862517.HMPREF9225_1630	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-0290045_12	862517.HMPREF9225_1631	155.0	0	N/A	N/A
PHROG	UHGV-0290045_13	phrog_521	62.8	3.8e-18	tail protein	tail
UniRef90	UHGV-0290045_13	UniRef90_UPI000568E341	280.0	0	N/A	N/A
eggNOG-mapper	UHGV-0290045_13	1118057.CAGX01000020_gene1599	282.0	0	N/A	N/A
PHROG	UHGV-0290045_14	phrog_6	174.7	0	baseplate protein	tail
UniRef90	UHGV-0290045_14	UniRef90_UPI0005666019	695.0	0	baseplate J/gp47 family protein	N/A
eggNOG-mapper	UHGV-0290045_14	1118057.CAGX01000020_gene1600	695.0	0	baseplate J-like protein	N/A
Pfam	UHGV-0290045_14	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0290045_14	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0290045_14	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_15	phrog_120	43.4	0.0000000000054	baseplate protein	tail
UniRef90	UHGV-0290045_15	UniRef90_UPI0002F3FDF6	282.0	0	N/A	N/A
eggNOG-mapper	UHGV-0290045_15	862517.HMPREF9225_1634	106.0	1.92e-27	N/A	N/A
Pfam	UHGV-0290045_15	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-0290045_15	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-0290045_15	PF10934,TIGR03357,COG3628	N/A	N/A	N/A	N/A
KOfam	UHGV-0290045_17	K21471	44.5	0.0000000000028	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0290045_17	phrog_400	261.7	0	tail protein	tail
UniRef90	UHGV-0290045_17	UniRef90_UPI0002D2D515	929.0	0	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-0290045_17	1118057.CAGX01000020_gene1603	929.0	0	PFAM Phage late control gene D protein (GPD)	N/A
Pfam	UHGV-0290045_17	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0290045_17	COG4193	N/A	N/A	Beta- N-acetylglucosaminidase	N/A
structural_annotation	UHGV-0290045_17	PF14594,PF00877,NF033848,NF008096,COG4379,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_18	phrog_380	75.9	6e-22	endolysin	lysis
UniRef90	UHGV-0290045_18	UniRef90_UPI001D10EF18	84.0	3.49e-16	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0290045_18	1118057.CAGX01000020_gene1604	427.0	0	positive regulation of growth rate	N/A
COG	UHGV-0290045_18	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
PHROG	UHGV-0290045_19	phrog_1068	344.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0290045_19	UniRef90_UPI0002FF39AC	1254.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0290045_19	1118057.CAGX01000020_gene1605	1254.0	0	tape measure	N/A
Pfam	UHGV-0290045_19	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0290045_19	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0290045_19	COG5281	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0290045_19	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_20	phrog_389	84.6	1.2e-24	tail protein XkdN-like	tail
UniRef90	UHGV-0290045_20	UniRef90_A0A379C642	105.0	1.33e-26	Phage XkdN-like protein	N/A
eggNOG-mapper	UHGV-0290045_20	875454.BAEW01000002_gene467	105.0	4.46e-27	XkdN-like protein	N/A
Pfam	UHGV-0290045_20	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-0290045_20	PF08890,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_21	phrog_365	100.7	1.3e-29	tail protein	tail
UniRef90	UHGV-0290045_21	UniRef90_A0A379C7N6	196.0	0	Phage-like element PBSX protein xkdM	N/A
eggNOG-mapper	UHGV-0290045_21	97138.C820_00996	82.4	6.27e-18	Phage tail tube protein	N/A
Pfam	UHGV-0290045_21	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-0290045_21	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_22	phrog_279	258.9	0	tail sheath	tail
UniRef90	UHGV-0290045_22	UniRef90_UPI0003143487	864.0	0	phage tail sheath subtilisin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0290045_22	1118057.CAGX01000020_gene1608	864.0	0	PFAM Phage tail sheath protein	N/A
Pfam	UHGV-0290045_22	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-0290045_22	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-0290045_22	PF17482,PF04984,PF17481,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_23	phrog_966	56.6	3.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0290045_23	642492.Clole_2751	50.4	0.000000104	N/A	N/A
PHROG	UHGV-0290045_24	phrog_525	57.6	2e-16	N/A	unknown function
Pfam	UHGV-0290045_24	PF20765	N/A	N/A	N/A	DUF6838
PHROG	UHGV-0290045_25	phrog_5	71.7	1.5e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-0290045_25	UniRef90_UPI0006874C9E	246.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0290045_25	1118057.CAGX01000020_gene1611	249.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0290045_25	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0290045_25	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_26	phrog_615	49.2	0.000000000000092	head-tail adaptor	connector
eggNOG-mapper	UHGV-0290045_26	469618.FVAG_01313	54.7	0.0000000871	N/A	N/A
structural_annotation	UHGV-0290045_26	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_28	phrog_29	210.6	0	major head protein	head and packaging
UniRef90	UHGV-0290045_28	UniRef90_UPI00031179C1	661.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0290045_28	1118057.CAGX01000020_gene1614	661.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0290045_28	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0290045_28	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_29	phrog_909	90.3	1.7e-26	major head protein	head and packaging
eggNOG-mapper	UHGV-0290045_29	1118057.CAGX01000020_gene1615	199.0	0	N/A	N/A
PHROG	UHGV-0290045_30	phrog_194	130.3	1.6e-38	head scaffolding protein	head and packaging
UniRef90	UHGV-0290045_30	UniRef90_UPI00031D776B	350.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0290045_30	1118057.CAGX01000020_gene1616	350.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0290045_30	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0290045_32	phrog_115	327.7	0	minor head protein	head and packaging
UniRef90	UHGV-0290045_32	UniRef90_UPI0002F591B7	547.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0290045_32	1118057.CAGX01000020_gene1618	547.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0290045_32	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0290045_32	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0290045_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0290045_32	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_33	phrog_64	272.1	0	portal protein	head and packaging
UniRef90	UHGV-0290045_33	UniRef90_UPI0002D4AAFA	872.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0290045_33	1118057.CAGX01000020_gene1619	870.0	0	phage portal protein, SPP1	N/A
Pfam	UHGV-0290045_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0290045_33	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_34	phrog_30251	492.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0290045_34	UniRef90_UPI00030C6708	762.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0290045_34	1118057.CAGX01000020_gene1620	762.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0290045_34	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0290045_34	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0290045_34	PF17289,MF_04147,NF033889,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_35	phrog_8148	84.3	9.2e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0290045_35	UniRef90_R7ITS8	71.6	0.00000000000000366	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0290045_35	1118057.CAGX01000020_gene1621	125.0	1.65e-37	chromosome segregation	N/A
COG	UHGV-0290045_35	COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_36	phrog_309	187.7	0	terminase small subunit	head and packaging
UniRef90	UHGV-0290045_36	UniRef90_UPI00196320DA	181.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0290045_36	1118057.CAGX01000020_gene1623	328.0	0	transposase activity	N/A
Pfam	UHGV-0290045_36	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0290045_36	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0290045_36	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0290045_37	K07319	138.2	7.50003e-41	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0290045_37	phrog_498	437.7	0	DNA methyltransferase	other
UniRef90	UHGV-0290045_37	UniRef90_UPI00030E053E	828.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-0290045_37	1118057.CAGX01000020_gene1624	827.0	0	ParB-like nuclease domain	N/A
PADLOC	UHGV-0290045_37	MTase_II_00015	261.9	0	Type II methyltransferase	RM
Pfam	UHGV-0290045_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0290045_37	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0290045_37	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0290045_37	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0290045_38	1118057.CAGX01000020_gene1625	105.0	9.52e-30	N/A	N/A
AcrCatalog	UHGV-0290045_38	cluster_6712	60.5	3.22e-16	NA	N/A
PHROG	UHGV-0290045_39	phrog_36	61.3	1.9e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0290045_39	UniRef90_UPI00031F0775	262.0	0	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0290045_39	994573.T472_0214010	55.1	0.000000108	sigma factor activity	N/A
COG	UHGV-0290045_39	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0290045_39	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0290045_40	UniRef90_UPI0003003F6A	126.0	1.05e-36	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0290045_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0290045_40	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_41	phrog_1992	129.6	1.3e-38	MazG-like pyrophosphatase	other
UniRef90	UHGV-0290045_41	UniRef90_UPI0002F24E2C	398.0	0	N/A	N/A
eggNOG-mapper	UHGV-0290045_41	875454.BAEW01000017_gene1618	145.0	1.34001e-40	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-0290045_41	PF11753	N/A	N/A	N/A	DUF3310
COG	UHGV-0290045_41	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
PHROG	UHGV-0290045_44	phrog_16126	57.3	1.4e-16	N/A	unknown function
UniRef90	UHGV-0290045_45	UniRef90_A0A133PS65	205.0	0	THF_DHG_CYH_C domain-containing protein	N/A
Pfam	UHGV-0290045_45	PF02882	N/A	N/A	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain	THF_DHG_CYH_C
COG	UHGV-0290045_45	COG0190	N/A	N/A	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	N/A
structural_annotation	UHGV-0290045_45	PF02882,MF_01576,NF010772,COG0190	N/A	N/A	N/A	N/A
KOfam	UHGV-0290045_46	K03111	139.5	3.89995e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0290045_46	phrog_44	156.8	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0290045_46	UniRef90_UPI0002F19656	280.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0290045_46	1118057.CAGX01000020_gene1635	280.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0290045_46	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0290045_46	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0290045_46	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0290045_46	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0290045_46	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0290045_47	1118057.CAGX01000020_gene1638	204.0	0	N/A	N/A
PHROG	UHGV-0290045_49	phrog_98	55.2	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-0290045_49	UniRef90_UPI0002E5D240	86.3	3.35e-19	YopX family protein	N/A
eggNOG-mapper	UHGV-0290045_49	1033733.CAEK01000007_gene1665	86.3	5.62e-20	YopX protein	N/A
Pfam	UHGV-0290045_49	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0290045_49	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0290045_51	phrog_25754	76.9	1.2e-22	N/A	unknown function