UHGV-0296350 (vOTU-147412)

Viral Genome: UHGV-0296350

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0296350
vOTU ID	vOTU-147412
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR3993007_141_19272_round8-12~3910862
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.06 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.02
Jumbo phage	No

Genome content
Genome length (bp)	29,927
GC content	54.96%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	26
CDS density	97%
Average CDS length (bps)	1,121.31
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0296350_1	phrog_14959	159.8	0	N/A	unknown function
UniRef90	UHGV-0296350_1	UniRef90_R5G2B7	1097.0	0	N/A	N/A
eggNOG-mapper	UHGV-0296350_1	657322.FPR_22010	1071.0	0	N/A	N/A
Pfam	UHGV-0296350_1	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0296350_2	phrog_6616	72.1	5.3e-21	tail protein	tail
eggNOG-mapper	UHGV-0296350_2	1235797.C816_04180	90.1	2.03e-17	N/A	N/A
structural_annotation	UHGV-0296350_2	PF16466,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_3	phrog_1194	66.8	3.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0296350_3	1232443.BAIA02000078_gene17	66.2	0.00000000000275	N/A	N/A
structural_annotation	UHGV-0296350_3	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-0296350_4	K13582	48.9	0.000000000000052	podJ; localization factor PodJL	N/A
PHROG	UHGV-0296350_4	phrog_1535	233.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0296350_4	1304866.K413DRAFT_3046	229.0	0	N/A	N/A
COG	UHGV-0296350_4	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0296350_5	phrog_706	135.7	2.9e-40	N/A	unknown function
UniRef90	UHGV-0296350_5	UniRef90_UPI0011DC8B0C	237.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0296350_5	411902.CLOBOL_00127	221.0	0	N/A	N/A
Pfam	UHGV-0296350_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0296350_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_6	phrog_11299	92.0	7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0296350_6	411459.RUMOBE_01382	62.8	0.000000000232	N/A	N/A
PHROG	UHGV-0296350_7	phrog_3099	118.7	4.4e-35	N/A	unknown function
eggNOG-mapper	UHGV-0296350_7	33035.JPJF01000106_gene3126	179.0	0	N/A	N/A
structural_annotation	UHGV-0296350_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_8	phrog_3266	100.1	1.5e-29	tail completion	connector
UniRef90	UHGV-0296350_8	UniRef90_UPI000D830B30	87.4	3.15e-19	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0296350_8	1280692.AUJL01000004_gene841	91.7	1.21e-21	N/A	N/A
structural_annotation	UHGV-0296350_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_9	phrog_556	73.1	3.2e-21	minor head protein	head and packaging
UniRef90	UHGV-0296350_9	UniRef90_UPI001958E7C1	115.0	5.04e-30	minor capsid protein	N/A
eggNOG-mapper	UHGV-0296350_9	1449050.JNLE01000003_gene3886	105.0	9.21e-27	N/A	N/A
Pfam	UHGV-0296350_9	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0296350_9	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_10	phrog_3366	83.9	7.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0296350_10	632245.CLP_1651	67.8	0.00000000000356	N/A	N/A
Pfam	UHGV-0296350_10	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0296350_10	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_11	phrog_541	69.6	4.5e-20	head-tail adaptor	connector
PHROG	UHGV-0296350_12	phrog_422	322.8	0	major head protein	head and packaging
UniRef90	UHGV-0296350_12	UniRef90_X5J9Z5	372.0	0	Putative major capsid protein	N/A
eggNOG-mapper	UHGV-0296350_12	1151292.QEW_1335	373.0	0	N/A	N/A
structural_annotation	UHGV-0296350_12	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_13	phrog_194	88.6	8.2e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0296350_13	UniRef90_UPI000C762A87	88.2	7.23e-18	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0296350_13	665956.HMPREF1032_03067	85.9	8.67e-18	Phage minor structural protein GP20	N/A
Pfam	UHGV-0296350_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0296350_15	phrog_581	142.0	5.29971e-42	minor head protein	head and packaging
UniRef90	UHGV-0296350_15	UniRef90_A0A136WBX5	191.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0296350_15	693746.OBV_18050	154.0	1.51e-39	Phage minor capsid protein 2	N/A
Pfam	UHGV-0296350_15	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0296350_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0296350_15	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_16	phrog_533	306.1	0	portal protein	head and packaging
UniRef90	UHGV-0296350_16	UniRef90_A0A6L5T8J5	596.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0296350_16	642492.Clole_0815	327.0	0	N/A	N/A
Pfam	UHGV-0296350_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0296350_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0296350_17	K06909	334.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0296350_17	phrog_3717	155.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0296350_17	UniRef90_A0A3D5I9U8	571.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0296350_17	411461.DORFOR_01162	402.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0296350_17	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0296350_17	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0296350_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0296350_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0296350_17	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0296350_22	PF03496,MF_04142,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_23	phrog_8680	220.1	0	N/A	unknown function
UniRef90	UHGV-0296350_23	UniRef90_A0A6L5T7C3	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-0296350_23	411470.RUMGNA_02208	218.0	0	N/A	N/A
Pfam	UHGV-0296350_23	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0296350_23	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_24	phrog_36	60.6	3.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0296350_24	UniRef90_UPI001D05F87A	93.6	7.59e-22	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0296350_24	1235835.C814_01174	97.8	2.64e-24	N/A	N/A
structural_annotation	UHGV-0296350_24	PF07374	N/A	N/A	N/A	N/A
KOfam	UHGV-0296350_25	K14440	104.8	1e-31	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0296350_25	phrog_62	392.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0296350_25	UniRef90_R8W3P9	614.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0296350_25	1203606.HMPREF1526_00244	614.0	0	snf2 family	N/A
PADLOC	UHGV-0296350_25	DpdE_00010	91.9	8.3e-27	DpdE	DPD
Pfam	UHGV-0296350_25	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0296350_25	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0296350_25	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0296350_25	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0296350_26	phrog_93	55.1	0.0000000000000011	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0296350_26	UniRef90_A0A3D5IB49	105.0	3.02e-27	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0296350_26	748727.CLJU_c36520	82.4	5.84e-19	VRR-NUC domain-containing protein	N/A
structural_annotation	UHGV-0296350_26	PF08774,MF_01490,NF041423	N/A	N/A	N/A	N/A