UHGV-0306220 (vOTU-031936)

Viral Genome: UHGV-0306220

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0306220
vOTU ID	vOTU-031936
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_127031_round1256~1059553
Associated BioSample	SAMN10285284
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.1 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9801
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.5
Jumbo phage	No

Genome content
Genome length (bp)	25,745
GC content	50.68%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	92%
Average CDS length (bps)	673.37
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0306220_3	phrog_14030	41.9	0.0000000000058	N/A	unknown function
UniRef90	UHGV-0306220_3	UniRef90_UPI00164EA432	572.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0306220_3	1235797.C816_02842	229.0	0	mannosyl-glycoprotein	N/A
Pfam	UHGV-0306220_3	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0306220_3	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0306220_3	PF08460,PF10030,TIGR02594,NF041850,COG4322,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_5	phrog_1863	68.4	6.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0306220_5	718252.FP2_04900	115.0	7.33e-33	N/A	N/A
PHROG	UHGV-0306220_6	phrog_30034	65.6	8e-19	N/A	unknown function
UniRef90	UHGV-0306220_6	UniRef90_UPI001EDF4BF9	148.0	3.58004e-41	chitinase	N/A
eggNOG-mapper	UHGV-0306220_6	1235796.C815_00903	107.0	3.62e-26	N/A	N/A
Pfam	UHGV-0306220_6	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-0306220_7	K00986	74.1	2e-21	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0306220_7	phrog_1423	179.1	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0306220_7	UniRef90_UPI00164D8919	758.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0306220_7	521003.COLINT_02359	236.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0306220_7	icity0040	62.3	1.2e-17	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0306220_7	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0306220_7	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0306220_7	PF00078,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_9	phrog_30516	58.0	7.8e-17	N/A	unknown function
structural_annotation	UHGV-0306220_9	PF05635,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_10	phrog_37900	94.0	9.1e-29	N/A	unknown function
UniRef90	UHGV-0306220_10	UniRef90_UPI00164D57E4	704.0	0	N/A	N/A
eggNOG-mapper	UHGV-0306220_10	1519439.JPJG01000060_gene1894	189.0	0	N/A	N/A
Pfam	UHGV-0306220_10	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0306220_10	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0306220_10	PF19789,PF14686,TIGR04183,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_11	phrog_18725	51.1	9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0306220_11	1226322.HMPREF1545_00062	97.4	6.01e-23	N/A	N/A
PHROG	UHGV-0306220_12	phrog_13879	275.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0306220_12	665956.HMPREF1032_03630	209.0	0	N/A	N/A
structural_annotation	UHGV-0306220_12	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_13	phrog_1194	93.2	2.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0306220_13	1298920.KI911353_gene4840	134.0	8.71e-39	N/A	N/A
Pfam	UHGV-0306220_13	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0306220_13	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_14	phrog_1535	154.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0306220_14	1121866.AUGK01000003_gene1437	275.0	0	phage tail tape measure protein	N/A
COG	UHGV-0306220_14	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0306220_14	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0306220_15	1121333.JMLH01000047_gene1011	78.6	1.46e-16	N/A	N/A
UniRef90	UHGV-0306220_16	UniRef90_UPI00164D364F	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0306220_16	469596.HMPREF9488_01311	87.4	7.29e-21	N/A	N/A
Pfam	UHGV-0306220_16	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0306220_16	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_17	phrog_158	59.8	6.1e-17	major tail protein	tail
UniRef90	UHGV-0306220_17	UniRef90_UPI00164D954A	266.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0306220_17	1232453.BAIF02000058_gene1634	101.0	1.11e-25	N/A	N/A
Pfam	UHGV-0306220_17	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0306220_17	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0306220_18	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0306220_19	1232453.BAIF02000058_gene1631	57.8	0.0000000542	N/A	N/A
eggNOG-mapper	UHGV-0306220_20	1298920.KI911353_gene2656	81.6	4.16e-18	N/A	N/A
UniRef90	UHGV-0306220_21	UniRef90_UPI00164E20D5	182.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0306220_21	1298920.KI911353_gene2658	66.6	0.000000000000727	N/A	N/A
Pfam	UHGV-0306220_21	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0306220_21	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_23	phrog_247	264.5	0	major head protein	head and packaging
UniRef90	UHGV-0306220_23	UniRef90_A0A3D0LY55	388.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0306220_23	903814.ELI_3208	308.0	0	N/A	N/A
structural_annotation	UHGV-0306220_23	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0306220_24	UniRef90_A0A7C7EK05	58.5	0.000000289	N/A	N/A
PHROG	UHGV-0306220_26	phrog_64	212.1	0	portal protein	head and packaging
UniRef90	UHGV-0306220_26	UniRef90_UPI001C02F349	713.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0306220_26	1123263.AUKY01000015_gene1609	446.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0306220_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0306220_26	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_27	phrog_38	154.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0306220_27	UniRef90_UPI00164E3A67	1087.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0306220_27	1298920.KI911353_gene2682	291.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0306220_27	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0306220_27	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0306220_27	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-0306220_28	UniRef90_A0A1T4KNQ3	60.8	0.000000163	Zinc-ribbon domain-containing protein	N/A
structural_annotation	UHGV-0306220_28	PF19569,COG3427	N/A	N/A	N/A	N/A
KOfam	UHGV-0306220_29	K14060	97.3	2.1e-28	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0306220_29	phrog_125	126.5	2.1e-37	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0306220_29	UniRef90_H1CEQ0	271.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0306220_29	1345695.CLSA_c29990	164.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0306220_29	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0306220_29	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0306220_29	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0306220_30	UniRef90_UPI001C02D1DF	77.0	5.96e-17	winged helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0306220_30	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-0306220_30	PF20075,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0306220_34	phrog_4264	63.6	2.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0306220_34	442493.A8E2H1_BPPHE	50.1	0.00000174	N/A	N/A
PHROG	UHGV-0306220_35	phrog_606	48.1	0.000000000000098	terminase small subunit	head and packaging
UniRef90	UHGV-0306220_35	UniRef90_UPI001C012D23	303.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0306220_35	1280663.ATVR01000009_gene2143	68.9	0.0000000000036	N/A	N/A
Pfam	UHGV-0306220_35	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0306220_35	PF16677	N/A	N/A	N/A	N/A