UHGV-0314881 (vOTU-028304)

Viral Genome: UHGV-0314881

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0314881
vOTU ID	vOTU-028304
Representative Genome?	Yes
Source	mMGE
Original genome ID	k119_30855_round14~1926975
Associated BioSample	SAMN06165207
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.19 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.982
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.74
Jumbo phage	No

Genome content
Genome length (bp)	22,364
GC content	50.85%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	33
CDS density	94%
Average CDS length (bps)	640.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0314881_1	K00390	55.8	9.5e-16	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0314881_1	phrog_424	57.1	3.7e-16	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0314881_1	UniRef90_UPI001D06C27F	142.0	8.30998e-41	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0314881_1	1408437.JNJN01000032_gene2312	153.0	1.96182e-44	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-0314881_1	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0314881_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
UniRef90	UHGV-0314881_3	UniRef90_A0A2V2EEG3	69.7	0.00000000000276	N/A	N/A
Pfam	UHGV-0314881_3	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0314881_4	phrog_3136	143.5	5.70328e-43	N/A	unknown function
UniRef90	UHGV-0314881_4	UniRef90_A0A3D0HBD2	164.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0314881_4	747.DR93_155	53.5	0.000000876	ASCH	N/A
Pfam	UHGV-0314881_4	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0314881_4	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0314881_4	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0314881_6	K02647	45.4	0.00000000000095	cdaR; carbohydrate diacid regulator	N/A
UniRef90	UHGV-0314881_6	UniRef90_UPI00164DE10C	55.1	0.0000000132	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0314881_6	1301100.HG529387_gene5110	57.8	0.0000000056	Putative sugar diacid recognition	N/A
Pfam	UHGV-0314881_6	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-0314881_6	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0314881_6	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0314881_7	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-0314881_8	K22299	42.0	0.00000000002	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0314881_8	UniRef90_A0A1C6J963	107.0	7.05e-29	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0314881_8	1226322.HMPREF1545_00039	70.5	0.00000000000000361	sequence-specific DNA binding	N/A
Pfam	UHGV-0314881_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0314881_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0314881_10	phrog_1271	64.7	1.8e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0314881_10	UniRef90_A0A8I1IWH2	112.0	3.1e-26	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0314881_10	751944.HALDL1_06785	60.5	0.0000000553	COG1403 Restriction endonuclease	N/A
COG	UHGV-0314881_10	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0314881_13	K06909	379.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0314881_13	phrog_5653	163.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0314881_13	UniRef90_A0A2U1BEH4	717.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0314881_13	1123511.KB905868_gene187	462.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0314881_13	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0314881_13	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0314881_13	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0314881_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0314881_13	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_14	phrog_533	352.5	0	portal protein	head and packaging
UniRef90	UHGV-0314881_14	UniRef90_UPI0006C81717	676.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0314881_14	1226322.HMPREF1545_00044	604.0	0	N/A	N/A
Pfam	UHGV-0314881_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0314881_14	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_16	phrog_8680	233.3	0	N/A	unknown function
UniRef90	UHGV-0314881_16	UniRef90_A0A3R6D7I3	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-0314881_16	411470.RUMGNA_02208	239.0	0	N/A	N/A
Pfam	UHGV-0314881_16	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0314881_16	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_18	phrog_581	288.2	0	minor head protein	head and packaging
UniRef90	UHGV-0314881_18	UniRef90_UPI001D080D49	556.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0314881_18	1226322.HMPREF1545_00046	378.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0314881_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0314881_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0314881_18	PF06152,PF15887,TIGR01641,COG4307	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0314881_20	PF18152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0314881_21	1232443.BAIA02000078_gene31	86.3	5.77e-19	N/A	N/A
structural_annotation	UHGV-0314881_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_22	phrog_10	166.8	0	major head protein	head and packaging
UniRef90	UHGV-0314881_22	UniRef90_A0A2U1BEF2	536.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0314881_22	1226322.HMPREF1545_00050	479.0	0	Phage capsid family	N/A
Pfam	UHGV-0314881_22	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0314881_22	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0314881_22	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0314881_22	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_23	phrog_541	106.0	2.5e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0314881_23	642492.Clole_0822	66.2	0.00000000000574	N/A	N/A
PHROG	UHGV-0314881_24	phrog_3366	91.4	1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0314881_24	1226322.HMPREF1545_00053	154.0	0	N/A	N/A
structural_annotation	UHGV-0314881_24	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_25	phrog_556	69.6	3.9e-20	minor head protein	head and packaging
UniRef90	UHGV-0314881_25	UniRef90_UPI00195E1497	174.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0314881_25	1226322.HMPREF1545_00054	131.0	2.01e-37	Minor capsid protein	N/A
Pfam	UHGV-0314881_25	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0314881_25	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_26	phrog_3266	51.5	0.000000000000015	tail completion	connector
eggNOG-mapper	UHGV-0314881_26	1232443.BAIA02000078_gene24	141.0	3.75001e-41	N/A	N/A
structural_annotation	UHGV-0314881_26	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_27	phrog_3099	98.3	8.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0314881_27	1226322.HMPREF1545_00056	243.0	0	N/A	N/A
structural_annotation	UHGV-0314881_27	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_28	phrog_11299	90.7	1.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0314881_28	693746.OBV_18160	218.0	0	N/A	N/A
structural_annotation	UHGV-0314881_28	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_29	phrog_706	125.2	5e-37	N/A	unknown function
UniRef90	UHGV-0314881_29	UniRef90_UPI000682A80B	228.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0314881_29	693746.OBV_18170	219.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0314881_29	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0314881_29	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_31	phrog_1535	95.4	2.2e-30	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0314881_31	693746.OBV_18190	528.0	0	domain protein	N/A
COG	UHGV-0314881_31	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0314881_31	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_32	phrog_1194	54.7	0.0000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0314881_32	1226322.HMPREF1545_00060	204.0	0	N/A	N/A
structural_annotation	UHGV-0314881_32	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0314881_33	phrog_32744	577.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0314881_33	1120998.AUFC01000030_gene2247	246.0	0	N/A	N/A
structural_annotation	UHGV-0314881_33	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A