UHGV-0315526 (vOTU-109553)

Viral Genome: UHGV-0315526

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0315526
vOTU ID	vOTU-109553
Representative Genome?	Yes
Source	mMGE
Original genome ID	DRR127536_141_23472_round13~8676870
Associated BioSample	SAMD00164916
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.72 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9733
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.11
Jumbo phage	No

Genome content
Genome length (bp)	31,916
GC content	66.00%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	57
CDS density	96%
Average CDS length (bps)	536.95
Total tRNA genes	4
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0315526_2	phrog_15768	95.5	4.7e-29	N/A	unknown function
UniRef90	UHGV-0315526_2	UniRef90_R0D5K9	70.9	0.000000000019	N/A	N/A
eggNOG-mapper	UHGV-0315526_2	742722.HMPREF9463_00205	173.0	0	N/A	N/A
AcrCatalog	UHGV-0315526_2	cluster_38323	70.9	9.87e-17	NA	N/A
Pfam	UHGV-0315526_2	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0315526_2	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0315526_3	K02315	124.7	9.1e-37	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0315526_3	phrog_50	103.3	2.8e-30	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0315526_3	UniRef90_A0A6N9JJF9	232.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0315526_3	521003.COLINT_02321	223.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0315526_3	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0315526_3	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0315526_3	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0315526_4	469378.Ccur_02900	57.8	0.00000000991	N/A	N/A
structural_annotation	UHGV-0315526_8	PF01503,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_10	phrog_2164	91.8	5.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-0315526_10	548476.cauri_2016	62.4	0.000000000454	N/A	N/A
eggNOG-mapper	UHGV-0315526_11	521003.COLINT_02330	64.7	0.00000000201	N/A	N/A
PHROG	UHGV-0315526_14	phrog_599	48.7	0.00000000000018	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0315526_14	UniRef90_UPI001485678D	138.0	4.00001e-41	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0315526_14	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0315526_14	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
PHROG	UHGV-0315526_16	phrog_803	50.2	0.000000000000042	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0315526_17	UniRef90_UPI0009300156	139.0	1.79e-40	N/A	N/A
eggNOG-mapper	UHGV-0315526_17	1235794.C811_01363	83.2	5.01e-19	N/A	N/A
Pfam	UHGV-0315526_17	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0315526_17	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_19	phrog_843	67.3	2e-19	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0315526_19	UniRef90_A0A3N0AG95	149.0	5.40901e-43	Holliday junction resolvase RecU	N/A
Pfam	UHGV-0315526_19	PF03838	N/A	N/A	Recombination protein U	RecU
UniRef90	UHGV-0315526_20	UniRef90_A0A437UTS5	94.7	8.55e-22	N/A	N/A
PHROG	UHGV-0315526_24	phrog_421	101.0	1.2e-29	N/A	unknown function
UniRef90	UHGV-0315526_24	UniRef90_A0A3N0AGL3	229.0	0	N/A	N/A
eggNOG-mapper	UHGV-0315526_24	742722.HMPREF9463_00227	186.0	0	N/A	N/A
Pfam	UHGV-0315526_24	PF10979	N/A	N/A	N/A	DUF2786
structural_annotation	UHGV-0315526_24	PF10979	N/A	N/A	N/A	N/A
UniRef90	UHGV-0315526_25	UniRef90_UPI001D10AECC	108.0	1.25e-28	N/A	N/A
eggNOG-mapper	UHGV-0315526_25	1122975.AQVC01000063_gene165	69.7	0.00000000000152	helicase C-terminal domain protein	N/A
Pfam	UHGV-0315526_25	PF11171	N/A	N/A	N/A	DUF2958
COG	UHGV-0315526_25	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-0315526_25	PF11171	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0315526_28	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_29	phrog_2302	114.1	8.2e-34	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0315526_29	UniRef90_A0A0B5BQ11	288.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0315526_29	742722.HMPREF9463_00233	242.0	0	sulfate reduction	N/A
COG	UHGV-0315526_29	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0315526_29	PF01507,MF_00063,TIGR02057,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_32	phrog_1897	42.2	0.000000000012	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0315526_32	401473.BDP_1459	60.5	0.000000000111	N/A	N/A
PHROG	UHGV-0315526_33	phrog_2412	48.6	0.00000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0315526_33	1125712.HMPREF1316_1524	66.2	0.00000000000491	N/A	N/A
PHROG	UHGV-0315526_34	phrog_38	128.7	4.2e-38	terminase large subunit	head and packaging
UniRef90	UHGV-0315526_34	UniRef90_UPI00166CA12B	429.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0315526_34	742722.HMPREF9463_00238	612.0	0	N/A	N/A
structural_annotation	UHGV-0315526_34	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_35	phrog_64	352.7	0	portal protein	head and packaging
UniRef90	UHGV-0315526_35	UniRef90_A0A3N0AG66	653.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0315526_35	742722.HMPREF9463_00239	525.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0315526_35	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0315526_35	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0315526_35	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-0315526_36	UniRef90_UPI000931FACD	94.4	3.69e-22	Rho termination factor N-terminal domain-containing protein	N/A
Pfam	UHGV-0315526_36	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
PHROG	UHGV-0315526_37	phrog_115	200.6	0	minor head protein	head and packaging
UniRef90	UHGV-0315526_37	UniRef90_A0A096KKG4	555.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0315526_37	742722.HMPREF9463_00241	555.0	0	domain, Protein	N/A
Pfam	UHGV-0315526_37	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0315526_37	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0315526_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0315526_37	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_39	phrog_990	54.5	0.0000000000000022	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0315526_39	UniRef90_UPI000B12E5EE	97.4	2.68e-24	HD domain-containing protein	N/A
eggNOG-mapper	UHGV-0315526_39	877414.ATWA01000018_gene2086	78.2	1.61e-17	N/A	N/A
COG	UHGV-0315526_39	COG0317	N/A	N/A	(p)ppGpp synthase/hydrolase, HD superfamily	N/A
UniRef90	UHGV-0315526_40	UniRef90_UPI0009316548	99.0	5.09e-25	thioredoxin family protein	N/A
PHROG	UHGV-0315526_42	phrog_172	110.2	2.1e-32	head scaffolding protein	head and packaging
UniRef90	UHGV-0315526_42	UniRef90_UPI000930CB63	235.0	0	N/A	N/A
eggNOG-mapper	UHGV-0315526_42	742722.HMPREF9463_00244	166.0	0	N/A	N/A
Pfam	UHGV-0315526_42	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0315526_42	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_43	phrog_909	40.8	0.000000000029	major head protein	head and packaging
PHROG	UHGV-0315526_44	phrog_29	182.0	0	major head protein	head and packaging
UniRef90	UHGV-0315526_44	UniRef90_UPI000931CAC7	460.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0315526_44	742722.HMPREF9463_00246	436.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0315526_44	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0315526_44	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0315526_45	UniRef90_X8HX34	69.3	0.000000000000625	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0315526_45	742722.HMPREF9463_00247	128.0	6.71e-37	N/A	N/A
structural_annotation	UHGV-0315526_45	PF05135	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0315526_46	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_47	phrog_5	45.3	0.0000000000022	tail completion or Neck1 protein	connector
UniRef90	UHGV-0315526_47	UniRef90_A0A437UU44	149.0	1.82169e-44	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0315526_47	742722.HMPREF9463_00249	130.0	2.28e-37	N/A	N/A
structural_annotation	UHGV-0315526_47	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0315526_48	UniRef90_A0A3N0AG57	203.0	0	N/A	N/A
eggNOG-mapper	UHGV-0315526_48	1235792.C808_05344	118.0	1.91e-32	N/A	N/A
Pfam	UHGV-0315526_48	PF16807	N/A	N/A	N/A	DUF5072
structural_annotation	UHGV-0315526_48	PF16807,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_49	phrog_1407	94.1	1.1e-27	major tail protein	tail
UniRef90	UHGV-0315526_49	UniRef90_A0A437UTX5	242.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0315526_49	742722.HMPREF9463_00251	226.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0315526_49	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0315526_49	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-0315526_49	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0315526_49	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0315526_50	1235792.C808_05346	76.6	1.4e-16	N/A	N/A
PHROG	UHGV-0315526_51	phrog_7423	66.1	3.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0315526_51	1140002.I570_02921	52.4	0.000000487	N/A	N/A
PHROG	UHGV-0315526_52	phrog_58	316.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0315526_52	742722.HMPREF9463_00254	261.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0315526_52	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0315526_52	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0315526_52	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0315526_52	PF20155,MF_04138,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_53	phrog_33	64.3	3.1e-18	distal tail protein Dit	tail
UniRef90	UHGV-0315526_53	UniRef90_J2HLG4	69.3	0.000000000157	Phage putative tail component	N/A
eggNOG-mapper	UHGV-0315526_53	445975.COLSTE_02154	110.0	1.21e-26	phage tail	N/A
Pfam	UHGV-0315526_53	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0315526_53	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0315526_53	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0315526_53	PF05709,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0315526_54	phrog_12312	412.8	0	virion structural protein	head and packaging
UniRef90	UHGV-0315526_54	UniRef90_A0A6N7RN58	524.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0315526_54	445975.COLSTE_02153	501.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0315526_54	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0315526_54	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0315526_54	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0315526_54	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0315526_56	445975.COLSTE_02151	114.0	4.31e-26	N/A	N/A
Pfam	UHGV-0315526_56	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0315526_56	PF10651,NF040788	N/A	N/A	N/A	N/A
UniRef90	UHGV-0315526_57	UniRef90_B6GDH0	390.0	0	N/A	N/A
eggNOG-mapper	UHGV-0315526_57	445975.COLSTE_02150	390.0	0	N/A	N/A
Pfam	UHGV-0315526_57	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0315526_57	PF19789	N/A	N/A	N/A	N/A