UHGV-0318217 (vOTU-118183)

Viral Genome: UHGV-0318217

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0318217
vOTU ID	vOTU-118183
Representative Genome?	Yes
Source	mMGE
Original genome ID	k99_58135_round1256~5592121
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.92 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.06
Jumbo phage	No

Genome content
Genome length (bp)	38,281
GC content	41.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	92%
Average CDS length (bps)	557.14
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0318217_1	phrog_6616	503.2	0	tail protein	tail
UniRef90	UHGV-0318217_1	UniRef90_A0A395X7B3	1430.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0318217_1	33035.JPJF01000043_gene1002	229.0	0	N/A	N/A
structural_annotation	UHGV-0318217_1	PF05113,PF02010,NF033848,NF007392,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318217_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_3	phrog_1535	490.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0318217_3	UniRef90_A0A173R880	495.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0318217_3	476272.RUMHYD_01785	499.0	0	phage tail tape measure protein	N/A
COG	UHGV-0318217_3	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318217_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_4	phrog_706	125.4	4.3e-37	N/A	unknown function
UniRef90	UHGV-0318217_4	UniRef90_UPI001BAD00AD	202.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0318217_4	411459.RUMOBE_01383	320.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0318217_4	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0318217_4	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_5	phrog_11299	70.0	3.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0318217_5	33035.JPJF01000106_gene3125	61.6	0.000000000414	N/A	N/A
structural_annotation	UHGV-0318217_5	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_6	phrog_3099	133.4	1.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0318217_6	411902.CLOBOL_00129	171.0	0	N/A	N/A
structural_annotation	UHGV-0318217_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_7	phrog_3266	93.5	1.8e-27	tail completion	connector
eggNOG-mapper	UHGV-0318217_7	476272.RUMHYD_01781	150.0	4.48416e-44	N/A	N/A
structural_annotation	UHGV-0318217_7	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_8	phrog_556	58.1	6.1e-17	minor head protein	head and packaging
UniRef90	UHGV-0318217_8	UniRef90_UPI000E4989EB	318.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0318217_8	476272.RUMHYD_01780	150.0	2.10195e-44	N/A	N/A
Pfam	UHGV-0318217_8	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0318217_8	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_9	phrog_3366	94.2	1.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0318217_9	476272.RUMHYD_01779	150.0	1.4013e-44	N/A	N/A
structural_annotation	UHGV-0318217_9	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_10	phrog_1129	77.0	1.6e-22	holin	lysis
UniRef90	UHGV-0318217_10	UniRef90_A0A395X7B2	171.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0318217_10	411461.DORFOR_00721	114.0	3.57e-32	N/A	N/A
Pfam	UHGV-0318217_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0318217_10	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_11	phrog_541	96.8	1.3e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0318217_11	476272.RUMHYD_01778	107.0	3.09e-27	N/A	N/A
PHROG	UHGV-0318217_12	phrog_544	163.5	0	major head protein	head and packaging
UniRef90	UHGV-0318217_12	UniRef90_A0A395X7A1	741.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0318217_12	1232453.BAIF02000011_gene3359	384.0	0	N/A	N/A
Pfam	UHGV-0318217_12	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0318217_12	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_13	phrog_194	66.5	5.6e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0318217_13	UniRef90_UPI001D14C9C8	180.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0318217_13	476272.RUMHYD_01775	197.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0318217_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0318217_14	phrog_28802	222.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0318217_14	476272.RUMHYD_01772	195.0	0	N/A	N/A
PHROG	UHGV-0318217_15	phrog_20016	205.1	0	N/A	unknown function
UniRef90	UHGV-0318217_15	UniRef90_A0A285PT46	166.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0318217_15	397290.C810_05214	185.0	0	N/A	N/A
structural_annotation	UHGV-0318217_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_16	phrog_16490	191.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0318217_16	397290.C810_01328	187.0	0	N/A	N/A
PHROG	UHGV-0318217_17	phrog_22984	94.2	8.2e-28	N/A	unknown function
PHROG	UHGV-0318217_18	phrog_21718	134.3	5.5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0318217_18	476272.RUMHYD_01768	132.0	1.35e-37	N/A	N/A
UniRef90	UHGV-0318217_19	UniRef90_A0A395X7A4	182.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0318217_19	476272.RUMHYD_01766	120.0	2.16e-34	N/A	N/A
PHROG	UHGV-0318217_20	phrog_3754	116.5	1.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0318217_20	476272.RUMHYD_01764	174.0	0	N/A	N/A
PHROG	UHGV-0318217_21	phrog_581	253.2	0	minor head protein	head and packaging
UniRef90	UHGV-0318217_21	UniRef90_A0A395X791	732.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0318217_21	33035.JPJF01000106_gene3134	404.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0318217_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0318217_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318217_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_22	phrog_374	229.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318217_22	UniRef90_A0A6L8SWJ4	483.0	0	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0318217_22	756499.Desde_1078	191.0	0	N/A	N/A
structural_annotation	UHGV-0318217_22	PF10729,MF_01580,NF007510	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_23	phrog_3180	45.4	0.0000000000011	Arc-like repressor	transcription regulation
UniRef90	UHGV-0318217_23	UniRef90_A0A5J5HFE5	52.4	0.0000000488	Ribbon-helix-helix domain-containing protein	N/A
structural_annotation	UHGV-0318217_23	PF19891,NF041793,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_24	phrog_533	275.7	0	portal protein	head and packaging
UniRef90	UHGV-0318217_24	UniRef90_A0A1C6CDM8	698.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0318217_24	33035.JPJF01000106_gene3135	524.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0318217_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0318217_26	K06909	332.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0318217_26	phrog_3717	165.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0318217_26	UniRef90_A0A395X9V4	836.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0318217_26	33035.JPJF01000106_gene3136	407.0	0	Terminase small subunit	N/A
Pfam	UHGV-0318217_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0318217_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0318217_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0318217_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0318217_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_27	phrog_606	81.5	1.1e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0318217_27	UniRef90_UPI001F487344	167.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0318217_27	397290.C810_05185	174.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0318217_27	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0318217_27	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_30	phrog_10714	55.4	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0318217_30	1120998.AUFC01000030_gene2222	48.1	0.0000045	N/A	N/A
eggNOG-mapper	UHGV-0318217_32	476272.RUMHYD_03348	60.8	0.0000000103	N/A	N/A
PHROG	UHGV-0318217_34	phrog_8684	88.8	3.5e-26	N/A	unknown function
UniRef90	UHGV-0318217_34	UniRef90_A0A2V2D5P6	200.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0318217_34	457412.RSAG_01162	87.8	5.56e-20	YopX protein	N/A
Pfam	UHGV-0318217_34	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0318217_34	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0318217_34	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_35	phrog_874	179.6	0	N/A	unknown function
UniRef90	UHGV-0318217_35	UniRef90_A0A6N7W7Q7	167.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0318217_35	632245.CLP_1629	165.0	0	N/A	N/A
structural_annotation	UHGV-0318217_35	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_36	phrog_20593	47.1	0.00000000000033	N/A	unknown function
PHROG	UHGV-0318217_37	phrog_20593	59.6	1.1e-17	N/A	unknown function
structural_annotation	UHGV-0318217_37	PF10400	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0318217_38	476272.RUMHYD_01751	48.9	0.00000454	N/A	N/A
AcrCatalog	UHGV-0318217_38	cluster_11670	43.1	0.0000000307	NA	N/A
PHROG	UHGV-0318217_40	phrog_15198	58.5	9.3e-17	N/A	unknown function
UniRef90	UHGV-0318217_40	UniRef90_A0A2V2D7Q1	188.0	0	N/A	N/A
eggNOG-mapper	UHGV-0318217_40	1232453.BAIF02000057_gene1153	52.4	0.00000266	N/A	N/A
Pfam	UHGV-0318217_40	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0318217_42	COG4446	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_43	phrog_599	45.2	0.000000000002	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0318217_43	UniRef90_UPI001C0F2DCC	135.0	3.19e-40	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0318217_43	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
eggNOG-mapper	UHGV-0318217_44	411459.RUMOBE_01111	67.4	0.00000000000324	N/A	N/A
UniRef90	UHGV-0318217_46	UniRef90_A0A412ELN5	178.0	0	LexA_DNA_bind domain-containing protein	N/A
Pfam	UHGV-0318217_46	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0318217_46	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0318217_46	PF01726,COG0640	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0318217_47	596152.DesU5LDRAFT_1910	76.3	0.0000000000000205	N/A	N/A
structural_annotation	UHGV-0318217_47	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_49	phrog_8841	554.7	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318217_49	UniRef90_A0A412EL97	1225.0	0	N/A	N/A
eggNOG-mapper	UHGV-0318217_49	476272.RUMHYD_01742	779.0	0	N/A	N/A
Pfam	UHGV-0318217_49	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0318217_49	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0318217_49	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318217_49	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0318217_50	K02316	64.7	1.4e-18	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0318217_50	phrog_11992	157.1	0	N/A	unknown function
UniRef90	UHGV-0318217_50	UniRef90_A0A395X7I4	308.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0318217_50	476272.RUMHYD_01741	182.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-0318217_50	drt-UG29	56.2	4e-16	DRT	DRT
Pfam	UHGV-0318217_50	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0318217_50	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0318217_50	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_51	phrog_3490	141.2	4.60046e-42	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318217_51	UniRef90_A0A358PKX4	230.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0318217_51	1256908.HMPREF0373_00660	199.0	0	N/A	N/A
Pfam	UHGV-0318217_51	PF02732	N/A	N/A	ERCC4 domain	ERCC4
PHROG	UHGV-0318217_52	phrog_18107	283.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0318217_52	397290.C810_05167	264.0	0	N/A	N/A
structural_annotation	UHGV-0318217_52	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_53	phrog_2872	199.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318217_53	UniRef90_UPI0011CB4DA4	290.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0318217_53	1415774.U728_1119	255.0	0	AAA domain	N/A
Pfam	UHGV-0318217_53	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0318217_53	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0318217_54	phrog_59	131.5	3.8e-39	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318217_54	UniRef90_A0A1H0H3E1	150.0	3.11088e-43	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0318217_54	1206110.L0P6F5_9CAUD	135.0	2.48e-37	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0318217_54	HEase_00016	88.2	3.6e-26	homing endonuclease	RM
Pfam	UHGV-0318217_54	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0318217_54	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0318217_54	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-0318217_55	UniRef90_R6RDX0	82.8	1.57e-19	Arginyl-tRNA synthetase	N/A
structural_annotation	UHGV-0318217_56	NF011879	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318217_58	PF10922,TIGR03741	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0318217_60	cluster_17974	58.2	0.00000000000000563	NA	N/A
PHROG	UHGV-0318217_61	phrog_6058	54.3	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-0318217_61	UniRef90_A0A2V1JQ38	66.2	0.00000000000394	Glycogen synthase	N/A
eggNOG-mapper	UHGV-0318217_61	742733.HMPREF9469_05094	61.6	0.0000000000428	N/A	N/A
PHROG	UHGV-0318217_62	phrog_463	202.7	0	anti-repressor	transcription regulation
UniRef90	UHGV-0318217_62	UniRef90_A0A3A6GZT3	318.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-0318217_62	411490.ANACAC_00813	197.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0318217_62	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0318217_62	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0318217_62	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0318217_62	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A