UHGV-0318591 (vOTU-028783)

Viral Genome: UHGV-0318591

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0318591
vOTU ID	vOTU-028783
Representative Genome?	Yes
Source	mMGE
Original genome ID	k141_50974_round8-12~3138585
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	73.13 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9741
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	57.94
Jumbo phage	No

Genome content
Genome length (bp)	26,547
GC content	53.35%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	95%
Average CDS length (bps)	584.44
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0318591_1	phrog_15609	45.7	0.0000000000011	N/A	unknown function
PHROG	UHGV-0318591_3	phrog_6499	57.7	1.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0318591_3	UniRef90_UPI000691E678	149.0	1.4013e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0318591_3	1200557.JHWV01000006_gene1755	72.8	0.00000000000000507	N/A	N/A
COG	UHGV-0318591_3	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
PHROG	UHGV-0318591_6	phrog_989	78.0	6.4e-23	N/A	unknown function
UniRef90	UHGV-0318591_6	UniRef90_A0A357Y2J0	111.0	4.09e-31	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0318591_6	515620.EUBELI_01804	66.2	0.0000000000000675	N/A	N/A
structural_annotation	UHGV-0318591_6	PF11372	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_9	phrog_398	157.1	0	N/A	unknown function
UniRef90	UHGV-0318591_9	UniRef90_UPI0018C6CD3B	195.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0318591_9	585503.HMPREF7545_1716	192.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0318591_9	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0318591_9	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_10	phrog_4707	78.4	1.7e-25	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318591_10	UniRef90_UPI0011C364A6	204.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0318591_10	742765.HMPREF9457_03058	125.0	5.3e-34	N/A	N/A
Pfam	UHGV-0318591_10	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0318591_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0318591_10	NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_11	phrog_9804	74.8	1.3e-21	N/A	unknown function
UniRef90	UHGV-0318591_11	UniRef90_A0A3M0XFT2	65.1	0.000000000777	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0318591_11	1280706.AUJE01000046_gene1152	128.0	7.19e-35	N/A	N/A
structural_annotation	UHGV-0318591_11	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0318591_12	K03111	65.2	1.6e-18	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0318591_12	phrog_44	55.7	0.0000000000000015	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318591_12	UniRef90_UPI001D02C67A	114.0	2.18e-30	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0318591_12	522772.Dacet_0007	53.9	0.00000025	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0318591_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0318591_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0318591_12	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318591_13	PF08861,COG5440	N/A	N/A	N/A	N/A
UniRef90	UHGV-0318591_17	UniRef90_UPI001D011922	155.0	0	N/A	N/A
Pfam	UHGV-0318591_17	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
KOfam	UHGV-0318591_22	K07451	41.7	0.000000000019	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0318591_22	phrog_119	61.9	9.8e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0318591_22	UniRef90_A0A356UL78	236.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0318591_22	1089548.KI783301_gene3222	99.0	1.42e-25	HNH endonuclease	N/A
Pfam	UHGV-0318591_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0318591_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0318591_22	NF008448	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_23	phrog_1066	77.7	1.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0318591_23	1232428.CAVO010000003_gene1013	100.0	2.6e-26	N/A	N/A
structural_annotation	UHGV-0318591_23	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_24	phrog_9	411.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0318591_24	UniRef90_UPI000F8DAF8B	842.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0318591_24	1232428.CAVO010000003_gene1012	697.0	0	Phage Terminase	N/A
Pfam	UHGV-0318591_24	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0318591_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0318591_24	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0318591_24	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_25	phrog_12	190.9	0	portal protein	head and packaging
UniRef90	UHGV-0318591_25	UniRef90_UPI00142FCB51	507.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0318591_25	1232428.CAVO010000003_gene1011	458.0	0	Phage portal protein	N/A
Pfam	UHGV-0318591_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0318591_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0318591_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0318591_26	K06904	135.0	7.2e-40	N/A	N/A
PHROG	UHGV-0318591_26	phrog_80	162.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0318591_26	UniRef90_A0A412CHQ0	202.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0318591_26	1235755.ANAM01000006_gene2374	166.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0318591_26	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0318591_26	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0318591_26	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0318591_26	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_27	phrog_10	193.2	0	major head protein	head and packaging
UniRef90	UHGV-0318591_27	UniRef90_A0A412CI12	487.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0318591_27	1341151.ASZU01000004_gene260	375.0	0	Phage capsid family	N/A
Pfam	UHGV-0318591_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0318591_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0318591_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0318591_27	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_28	phrog_40	59.6	4.7e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-0318591_28	UniRef90_A0A412CHC9	116.0	9.8e-32	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0318591_28	66692.ABC1335	49.7	0.00000219	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0318591_28	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0318591_28	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0318591_28	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_29	phrog_25	81.4	8.9e-24	head closure Hc1	connector
UniRef90	UHGV-0318591_29	UniRef90_UPI001648A1FB	172.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-0318591_29	1232428.CAVO010000003_gene1007	109.0	1.81e-29	Phage head-tail joining protein	N/A
Pfam	UHGV-0318591_29	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0318591_29	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0318591_29	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0318591_29	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_30	phrog_5	43.4	0.0000000000087	tail completion or Neck1 protein	connector
UniRef90	UHGV-0318591_30	UniRef90_UPI001645C731	161.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0318591_30	1232428.CAVO010000003_gene1006	71.6	0.0000000000000458	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0318591_30	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0318591_30	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_31	phrog_525	72.0	8.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0318591_31	293826.Amet_2419	62.4	0.000000000431	N/A	N/A
Pfam	UHGV-0318591_31	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-0318591_31	PF20765,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_32	phrog_1480	338.6	0	tail sheath	tail
UniRef90	UHGV-0318591_32	UniRef90_UPI0016491346	590.0	0	phage tail sheath subtilisin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0318591_32	1232428.CAVO010000003_gene1004	513.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-0318591_32	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-0318591_32	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-0318591_32	PF10758,COG3497	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_33	phrog_365	154.7	0	tail protein	tail
UniRef90	UHGV-0318591_33	UniRef90_A0A2S0M4K4	223.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0318591_33	1232428.CAVO010000003_gene1003	205.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0318591_33	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-0318591_33	PF09393,TIGR02241,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_34	phrog_389	82.5	5.2e-24	tail protein XkdN-like	tail
UniRef90	UHGV-0318591_34	UniRef90_UPI001645A435	70.5	0.000000000000728	XkdN-like protein	N/A
eggNOG-mapper	UHGV-0318591_34	1232428.CAVO010000003_gene1002	72.8	0.00000000000000541	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-0318591_34	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-0318591_34	PF08890	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_36	phrog_1533	382.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0318591_36	UniRef90_UPI001645A310	872.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0318591_36	1232428.CAVO010000003_gene1001	437.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0318591_36	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0318591_36	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0318591_36	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0318591_36	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_37	phrog_5184	147.3	3.64338e-44	N/A	unknown function
UniRef90	UHGV-0318591_37	UniRef90_A0A0L0W6M8	136.0	4.28e-36	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0318591_37	1232428.CAVO010000003_gene1000	177.0	0	LysM domain	N/A
Pfam	UHGV-0318591_37	PF21821	N/A	N/A	Dit-like phage tail protein	Dit_like
COG	UHGV-0318591_37	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-0318591_37	PF19266,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_38	phrog_400	219.9	0	tail protein	tail
UniRef90	UHGV-0318591_38	UniRef90_A0A848BXY8	417.0	0	Lytic transglycosylase domain-containing protein	N/A
eggNOG-mapper	UHGV-0318591_38	1232428.CAVO010000003_gene999	355.0	0	NLP P60 protein	N/A
COG	UHGV-0318591_38	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0318591_38	PF14594,PF00877,NF033848,NF008096,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_39	phrog_579	52.1	0.000000000000011	N/A	unknown function
UniRef90	UHGV-0318591_39	UniRef90_UPI0016483798	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-0318591_39	1123250.KB908414_gene2116	117.0	2.16e-32	N/A	N/A
Pfam	UHGV-0318591_39	PF10844	N/A	N/A	N/A	DUF2577
structural_annotation	UHGV-0318591_39	PF10844,TIGR00523	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_40	phrog_120	66.8	3e-19	baseplate protein	tail
UniRef90	UHGV-0318591_40	UniRef90_UPI001646EAB8	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-0318591_40	1232428.CAVO010000003_gene997	145.0	4.27396e-43	N/A	N/A
Pfam	UHGV-0318591_40	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-0318591_40	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-0318591_40	PF10934,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_41	phrog_6	214.2	0	baseplate protein	tail
UniRef90	UHGV-0318591_41	UniRef90_UPI0016450683	634.0	0	baseplate J/gp47 family protein	N/A
eggNOG-mapper	UHGV-0318591_41	1232428.CAVO010000003_gene996	271.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-0318591_41	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0318591_41	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318591_41	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_42	phrog_521	91.8	6.7e-27	tail protein	tail
UniRef90	UHGV-0318591_42	UniRef90_A0A848EVX3	242.0	0	N/A	N/A
eggNOG-mapper	UHGV-0318591_42	1111454.HMPREF1250_0200	93.2	5.95e-21	N/A	N/A
Pfam	UHGV-0318591_42	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
COG	UHGV-0318591_42	COG3778	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0318591_42	PF10076,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-0318591_43	phrog_7037	131.3	1e-38	tail fiber protein	tail
UniRef90	UHGV-0318591_43	UniRef90_UPI000486D8B9	236.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0318591_43	1232428.CAVO010000003_gene994	167.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0318591_43	PF12571	N/A	N/A	Phage tail-collar fibre protein	DUF3751
COG	UHGV-0318591_43	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0318591_43	PF12571	N/A	N/A	N/A	N/A