UHGV-0323593 (vOTU-050590)

Viral Genome: UHGV-0323593

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0323593
vOTU ID	vOTU-050590
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR6048476_141_122824_round347~2799199
Associated BioSample	SAMN07534215
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9679
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.82
Jumbo phage	No

Genome content
Genome length (bp)	38,519
GC content	53.87%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	91%
Average CDS length (bps)	664.25
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0323593_1	1280682.AUKA01000018_gene2337	167.0	0	N/A	N/A
KOfam	UHGV-0323593_2	K22300	59.8	5.1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0323593_2	phrog_2967	71.8	8.3e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0323593_2	UniRef90_UPI001CD62E64	108.0	2.63e-27	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0323593_2	1201292.DR75_340	88.6	9.97e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0323593_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0323593_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0323593_2	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0323593_3	UniRef90_UPI001F24D893	107.0	9.97e-29	N/A	N/A
eggNOG-mapper	UHGV-0323593_3	910314.HMPREF9220_1114	69.3	0.0000000000000105	N/A	N/A
Pfam	UHGV-0323593_3	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0323593_3	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0323593_3	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0323593_4	UniRef90_UPI001C03922B	68.6	0.000000000000111	excisionase family DNA-binding protein	N/A
eggNOG-mapper	UHGV-0323593_4	1291050.JAGE01000002_gene3380	60.1	0.0000000000566	N/A	N/A
structural_annotation	UHGV-0323593_4	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_5	phrog_22529	114.7	4.7e-34	N/A	unknown function
UniRef90	UHGV-0323593_5	UniRef90_A0A7V6W4M6	147.0	6.57069e-42	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0323593_5	658088.HMPREF0987_02675	100.0	1.81e-22	peptidase	N/A
Pfam	UHGV-0323593_5	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0323593_5	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0323593_5	PF06725,MF_02071,NF040677,COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_6	phrog_997	102.0	4.7e-30	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0323593_6	UniRef90_R6MCS9	106.0	1.82e-27	N/A	N/A
eggNOG-mapper	UHGV-0323593_6	1519439.JPJG01000059_gene1910	134.0	2.88e-39	N/A	N/A
PHROG	UHGV-0323593_7	phrog_1029	155.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0323593_7	552398.HMPREF0866_01625	140.0	4.36e-38	N/A	N/A
structural_annotation	UHGV-0323593_7	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-0323593_8	K03546	70.0	2.5e-20	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0323593_8	phrog_1499	274.7	0	N/A	unknown function
UniRef90	UHGV-0323593_8	UniRef90_UPI00164CEF4D	696.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0323593_8	1007096.BAGW01000023_gene155	669.0	0	DNA recombination	N/A
Pfam	UHGV-0323593_8	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0323593_8	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-0323593_8	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_9	phrog_21613	62.2	7.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0323593_9	1120998.AUFC01000030_gene2214	84.7	1.55e-17	N/A	N/A
PHROG	UHGV-0323593_10	phrog_1227	215.9	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0323593_10	UniRef90_UPI00164E5A62	476.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0323593_10	1007096.BAGW01000023_gene152	435.0	0	N/A	N/A
Pfam	UHGV-0323593_10	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0323593_10	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0323593_10	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
KOfam	UHGV-0323593_11	K02316	67.8	1.5e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0323593_11	phrog_11992	122.9	2.6e-36	N/A	unknown function
UniRef90	UHGV-0323593_11	UniRef90_A0A352RPQ9	266.0	0	ZnF_CHCC domain-containing protein	N/A
eggNOG-mapper	UHGV-0323593_11	742738.HMPREF9460_02494	203.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-0323593_11	drt-cluster192	70.9	3.4e-20	DRT	DRT
Pfam	UHGV-0323593_11	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0323593_11	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0323593_11	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_12	phrog_8841	479.1	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0323593_12	UniRef90_UPI00164DBC57	1018.0	0	N/A	N/A
eggNOG-mapper	UHGV-0323593_12	742738.HMPREF9460_02495	991.0	0	N/A	N/A
Pfam	UHGV-0323593_12	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0323593_12	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0323593_12	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0323593_12	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0323593_13	K17677	388.5	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0323593_13	phrog_16	250.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0323593_13	UniRef90_UPI00164D082B	839.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0323593_13	742738.HMPREF9460_02499	818.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-0323593_13	mREase_IV_00005	102.1	4.5e-30	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0323593_13	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0323593_13	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0323593_13	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0323593_13	PF04851,PF16203,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_14	phrog_3253	55.0	7.1e-16	N/A	unknown function
UniRef90	UHGV-0323593_14	UniRef90_UPI0011773349	54.7	0.00000000871	resolvase	N/A
structural_annotation	UHGV-0323593_14	PF18618	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_15	phrog_824	145.6	1.30321e-43	N/A	unknown function
UniRef90	UHGV-0323593_15	UniRef90_UPI00164D35CF	208.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0323593_15	1235792.C808_00622	122.0	9.71e-33	VRR_NUC	N/A
Pfam	UHGV-0323593_15	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0323593_15	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_18	phrog_323	61.6	3.9e-32	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0323593_18	UniRef90_M1ZZD8	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0323593_18	394503.Ccel_3305	115.0	3.56e-26	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	N/A
Pfam	UHGV-0323593_18	PF13404	N/A	N/A	AsnC-type helix-turn-helix domain	HTH_AsnC-type
dbAPIS	UHGV-0323593_18	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
structural_annotation	UHGV-0323593_18	PF11112,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_20	phrog_3221	55.8	5.8e-16	N/A	unknown function
Pfam	UHGV-0323593_20	PF12677	N/A	N/A	N/A	DUF3797
UniRef90	UHGV-0323593_21	UniRef90_UPI0018735939	77.4	0.00000000000000559	N/A	N/A
eggNOG-mapper	UHGV-0323593_21	665950.HMPREF1025_02540	67.0	0.00000000000713	N/A	N/A
structural_annotation	UHGV-0323593_21	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_22	phrog_23490	80.8	8.2e-24	N/A	unknown function
UniRef90	UHGV-0323593_22	UniRef90_R6RLI7	82.8	2.03e-19	YoqE	N/A
Pfam	UHGV-0323593_24	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
Pfam	UHGV-0323593_24	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
NCBIFam	UHGV-0323593_24	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0323593_24	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0323593_24	PF08281,MF_00245,TIGR03001,NF001073,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0323593_25	K23779	56.9	5.1e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0323593_25	phrog_8	70.6	3.3e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0323593_25	UniRef90_UPI0018989C77	94.7	3.81e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0323593_25	1226322.HMPREF1545_00039	70.1	0.00000000000000422	sequence-specific DNA binding	N/A
PADLOC	UHGV-0323593_25	retron_type_VI_hth_cluster2_1	45.3	0.0000000000025	N/A	Retron
Pfam	UHGV-0323593_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0323593_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0323593_25	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_26	phrog_2412	86.6	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0323593_26	742738.HMPREF9460_02504	145.0	1.27518e-43	N/A	N/A
KOfam	UHGV-0323593_27	K06909	391.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0323593_27	phrog_3717	159.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0323593_27	UniRef90_UPI00164D9352	713.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0323593_27	665956.HMPREF1032_02957	593.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0323593_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0323593_27	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0323593_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0323593_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0323593_27	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_29	phrog_533	186.2	0	portal protein	head and packaging
UniRef90	UHGV-0323593_29	UniRef90_UPI000680A1DB	632.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0323593_29	693746.OBV_18040	410.0	0	N/A	N/A
structural_annotation	UHGV-0323593_29	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_30	phrog_581	210.6	0	minor head protein	head and packaging
UniRef90	UHGV-0323593_30	UniRef90_UPI0006814CA4	431.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0323593_30	693746.OBV_18050	410.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0323593_30	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0323593_30	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0323593_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0323593_30	PF06152,PF12636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0323593_31	PF07073,MF_01077,NF037951,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_33	phrog_194	91.8	9.2e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0323593_33	UniRef90_UPI00164D9F94	266.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0323593_33	693746.OBV_18080	176.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0323593_33	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0323593_33	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_34	phrog_422	228.9	0	major head protein	head and packaging
UniRef90	UHGV-0323593_34	UniRef90_W0U896	370.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0323593_34	693746.OBV_18090	417.0	0	N/A	N/A
structural_annotation	UHGV-0323593_34	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0323593_35	UniRef90_UPI00164D7D74	54.7	0.00000000967	C2H2-type zinc finger protein	N/A
Pfam	UHGV-0323593_35	PF00096	N/A	N/A	Zinc finger, C2H2 type	zf-C2H2
PHROG	UHGV-0323593_36	phrog_541	59.3	6.7e-17	head-tail adaptor	connector
eggNOG-mapper	UHGV-0323593_36	693746.OBV_18110	117.0	1.09e-32	N/A	N/A
structural_annotation	UHGV-0323593_37	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_38	phrog_3266	54.2	0.0000000000000022	tail completion	connector
eggNOG-mapper	UHGV-0323593_38	693746.OBV_18140	221.0	0	N/A	N/A
structural_annotation	UHGV-0323593_38	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_39	phrog_3099	73.9	2.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0323593_39	693746.OBV_18150	261.0	0	N/A	N/A
structural_annotation	UHGV-0323593_39	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_40	phrog_11299	80.3	2.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0323593_40	693746.OBV_18160	106.0	1.1e-27	N/A	N/A
structural_annotation	UHGV-0323593_40	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_41	phrog_706	113.3	2.3e-33	N/A	unknown function
UniRef90	UHGV-0323593_41	UniRef90_UPI00164D7633	306.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0323593_41	693746.OBV_18170	272.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0323593_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0323593_41	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_42	phrog_1535	120.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0323593_42	UniRef90_A0A810PX76	186.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0323593_42	1235797.C816_04182	350.0	0	SLT domain	N/A
COG	UHGV-0323593_42	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0323593_42	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_43	phrog_1194	62.1	8.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0323593_43	1226322.HMPREF1545_00060	241.0	0	N/A	N/A
structural_annotation	UHGV-0323593_43	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_44	phrog_13879	306.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0323593_44	1226322.HMPREF1545_00061	581.0	0	N/A	N/A
structural_annotation	UHGV-0323593_44	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0323593_45	phrog_18725	47.2	0.00000000000029	N/A	unknown function
eggNOG-mapper	UHGV-0323593_45	1226322.HMPREF1545_00062	99.4	9.53e-23	N/A	N/A
UniRef90	UHGV-0323593_47	UniRef90_R6TFP6	121.0	8.5e-32	Serine/threonine-protein phosphatase 1 regulatory subunit 10	N/A
PHROG	UHGV-0323593_48	phrog_27545	98.8	4.7e-29	N/A	unknown function
UniRef90	UHGV-0323593_48	UniRef90_R6TFQ2	228.0	0	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-0323593_48	411471.SUBVAR_06976	141.0	7.56001e-41	N/A	N/A
PHROG	UHGV-0323593_49	phrog_37604	193.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0323593_49	457412.RSAG_01109	127.0	1.12e-35	N/A	N/A
PHROG	UHGV-0323593_50	phrog_36029	149.2	1.4013e-44	N/A	unknown function
UniRef90	UHGV-0323593_50	UniRef90_A0A345BPS8	119.0	2.59e-32	Holin of superfamily 6	N/A
eggNOG-mapper	UHGV-0323593_50	411468.CLOSCI_01511	130.0	2.03e-37	N/A	N/A
UniRef90	UHGV-0323593_51	UniRef90_A0A1C5ZFH0	522.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0323593_51	397291.C804_01109	190.0	0	Phage lysozyme	N/A
Pfam	UHGV-0323593_51	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
COG	UHGV-0323593_51	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0323593_51	PF03412,COG4990	N/A	N/A	N/A	N/A
KOfam	UHGV-0323593_53	K14059	259.2	0	int; integrase	N/A
PHROG	UHGV-0323593_53	phrog_1	191.7	0	integrase	integration and excision
UniRef90	UHGV-0323593_53	UniRef90_UPI00095121BF	662.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0323593_53	1291050.JAGE01000002_gene3375	633.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0323593_53	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0323593_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0323593_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0323593_53	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A