UHGV-0327395 (vOTU-031099)

Viral Genome: UHGV-0327395

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0327395
vOTU ID	vOTU-031099
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR8133881_141_4247_round1256~2318630
Associated BioSample	SAMN10342684
Viral genome confidence	Confident

Quality assessment
CheckV method	HMM-based
CheckV completeness	59.35 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.8
Jumbo phage	No

Genome content
Genome length (bp)	35,509
GC content	53.80%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	92%
Average CDS length (bps)	556.42
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0327395_6	phrog_22543	40.9	0.000000000037	N/A	unknown function
PHROG	UHGV-0327395_9	phrog_36	62.4	8.5e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0327395_9	UniRef90_UPI001D0837DD	148.0	3.16693e-43	N/A	N/A
eggNOG-mapper	UHGV-0327395_9	580331.Thit_1400	95.5	3.9e-23	N/A	N/A
Pfam	UHGV-0327395_9	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0327395_9	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0327395_10	K07319	122.7	3.7e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0327395_10	phrog_498	433.6	0	DNA methyltransferase	other
UniRef90	UHGV-0327395_10	UniRef90_R5AIZ8	442.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0327395_10	1423758.BN55_01455	426.0	0	DNA methylase	N/A
PADLOC	UHGV-0327395_10	MTase_II_00015	237.6	0	Type II methyltransferase	RM
Pfam	UHGV-0327395_10	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0327395_10	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0327395_10	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0327395_10	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0327395_12	K06909	147.5	1.20512e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0327395_12	phrog_2	170.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0327395_12	UniRef90_A0A3D3Y0N9	620.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0327395_12	1226322.HMPREF1545_00043	551.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0327395_12	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0327395_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0327395_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0327395_12	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_13	phrog_64	170.5	0	portal protein	head and packaging
UniRef90	UHGV-0327395_13	UniRef90_UPI0018A8A301	588.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0327395_13	1235800.C819_02239	76.3	0.00000000000532	phage portal protein, SPP1	N/A
Pfam	UHGV-0327395_13	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0327395_13	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_14	phrog_15127	154.1	0	head protein	head and packaging
UniRef90	UHGV-0327395_14	UniRef90_A0A357BWK1	82.8	0.000000000000701	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-0327395_14	1504822.CCNO01000013_gene286	157.0	2.73e-38	cell adhesion	N/A
Pfam	UHGV-0327395_14	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0327395_14	TIGR01445.1	N/A	N/A	intein N-terminal splicing region	N/A
COG	UHGV-0327395_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0327395_16	PF02973	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_18	phrog_5	84.2	1.7e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-0327395_18	UniRef90_A0A4D7AJK9	183.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0327395_18	386415.NT01CX_2170	119.0	2.06e-32	N/A	N/A
Pfam	UHGV-0327395_18	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0327395_18	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0327395_18	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0327395_19	UniRef90_A0A6B9SU02	67.8	0.000000000156	Fibronectin autolysin	N/A
structural_annotation	UHGV-0327395_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_20	phrog_267	190.5	0	major head protein	head and packaging
UniRef90	UHGV-0327395_20	UniRef90_A0A3Q9B9E4	250.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0327395_20	673376.F2VHW8_9CAUD	248.0	0	viral capsid	N/A
Pfam	UHGV-0327395_20	PF19821	N/A	N/A	Phage capsid protein	Phage_capsid_2
structural_annotation	UHGV-0327395_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_22	phrog_17977	72.4	4.6e-21	N/A	unknown function
UniRef90	UHGV-0327395_22	UniRef90_A0A285PT57	96.3	2e-23	Phage head-tail joining protein	N/A
structural_annotation	UHGV-0327395_22	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0327395_23	UniRef90_A0A415JI88	129.0	3.68e-36	N/A	N/A
structural_annotation	UHGV-0327395_23	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_24	phrog_885	74.7	1.2e-21	major tail protein	tail
UniRef90	UHGV-0327395_24	UniRef90_A0A843J9F0	213.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0327395_24	1504822.CCNO01000012_gene492	251.0	0	N/A	N/A
structural_annotation	UHGV-0327395_24	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_27	phrog_6900	246.5	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0327395_27	1499683.CCFF01000017_gene2565	285.0	0	tape measure	N/A
COG	UHGV-0327395_27	COG1511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0327395_28	UniRef90_A0A1C5W6B6	94.4	1.33e-19	Phage-related protein	N/A
eggNOG-mapper	UHGV-0327395_28	1123263.AUKY01000068_gene490	78.2	0.0000000000000222	tail component	N/A
COG	UHGV-0327395_28	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0327395_28	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_29	phrog_1067	153.8	1.4013e-45	minor head protein	head and packaging
UniRef90	UHGV-0327395_29	UniRef90_A0A890GYC9	141.0	7.18e-34	Phage tail protein	N/A
eggNOG-mapper	UHGV-0327395_29	1123263.AUKY01000068_gene489	144.0	9.95e-36	Phage minor structural protein	N/A
Pfam	UHGV-0327395_29	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0327395_29	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0327395_29	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0327395_29	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_32	phrog_4105	49.0	0.0000000000001	N/A	unknown function
KOfam	UHGV-0327395_34	K01448	50.3	0.000000000000024	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0327395_34	phrog_435	57.1	4.6e-17	endolysin	lysis
UniRef90	UHGV-0327395_34	UniRef90_A0A810PUG7	198.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0327395_34	552398.HMPREF0866_03091	75.5	0.000000000000357	CHAP domain	N/A
Pfam	UHGV-0327395_34	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0327395_34	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0327395_34	PF01520,PF01471,MF_00562,TIGR02883,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_35	phrog_443	63.7	5.1e-18	holin	lysis
UniRef90	UHGV-0327395_35	UniRef90_R6MWB0	86.7	4.81e-21	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0327395_35	1469948.JPNB01000002_gene3855	82.4	3.65e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0327395_35	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0327395_35	PF16945	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0327395_36	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0327395_37	K14059	130.1	3.2e-38	int; integrase	N/A
PHROG	UHGV-0327395_37	phrog_1	155.7	0	integrase	integration and excision
UniRef90	UHGV-0327395_37	UniRef90_A0A810Q0Y2	404.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0327395_37	693746.OBV_43340	365.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0327395_37	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0327395_37	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0327395_37	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0327395_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0327395_38	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0327395_43	K18830	63.8	4e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0327395_43	phrog_2967	51.6	0.0000000000000089	transcriptional regulator	transcription regulation
UniRef90	UHGV-0327395_43	UniRef90_E2ZIF0	122.0	3.64e-33	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0327395_43	748224.HMPREF9436_01444	122.0	6.11e-34	N/A	N/A
PADLOC	UHGV-0327395_43	retron_type_VI_hth_cluster2_1	46.6	0.00000000000078	N/A	Retron
Pfam	UHGV-0327395_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0327395_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0327395_43	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_45	phrog_4392	51.3	0.000000000000017	N/A	unknown function
UniRef90	UHGV-0327395_45	UniRef90_UPI000E489044	85.9	3.2e-19	membrane lipoprotein lipid attachment site-containing protein	N/A
eggNOG-mapper	UHGV-0327395_46	760568.Desku_0919	102.0	1.56e-24	N/A	N/A
structural_annotation	UHGV-0327395_46	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0327395_47	1235835.C814_03153	67.4	0.0000000000000362	N/A	N/A
structural_annotation	UHGV-0327395_47	PF09035,TIGR01764	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0327395_48	PF19885	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0327395_49	246199.CUS_7259	48.9	0.00000437	Helix-turn-helix domain	N/A
Pfam	UHGV-0327395_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0327395_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0327395_50	PF14634	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_52	phrog_7838	157.2	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0327395_52	UniRef90_A0A8D9UGW3	208.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0327395_52	742767.HMPREF9456_02052	163.0	0	N/A	N/A
structural_annotation	UHGV-0327395_52	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_53	phrog_72	50.9	0.00000000000002	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0327395_53	UniRef90_A0A2Z4Q9W9	113.0	8.4e-29	NinB	N/A
eggNOG-mapper	UHGV-0327395_53	445972.ANACOL_01825	129.0	1.36e-35	N/A	N/A
structural_annotation	UHGV-0327395_53	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0327395_54	K03111	137.6	1.50001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0327395_54	phrog_44	139.9	1.6e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0327395_54	UniRef90_UPI001BB47F69	177.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0327395_54	1226322.HMPREF1545_04080	174.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0327395_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0327395_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0327395_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0327395_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0327395_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0327395_55	K01160	51.4	0.000000000000029	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0327395_55	phrog_140	119.3	2.8e-35	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0327395_55	UniRef90_A0A4R6DX18	114.0	6.46e-30	Holliday junction resolvase RusA-like endonuclease	N/A
eggNOG-mapper	UHGV-0327395_55	1123263.AUKY01000072_gene2102	108.0	2.24e-28	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0327395_55	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0327395_55	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0327395_55	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_56	phrog_4973	69.6	4e-20	N/A	unknown function
UniRef90	UHGV-0327395_56	UniRef90_A0A3D3Y5F2	85.5	2.33e-20	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0327395_56	935261.JAGL01000009_gene1175	51.6	0.0000000815	Helix-turn-helix domain	N/A
Pfam	UHGV-0327395_56	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0327395_56	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0327395_57	phrog_11769	178.0	0	N/A	unknown function
UniRef90	UHGV-0327395_57	UniRef90_UPI0009B7700E	233.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0327395_57	536232.CLM_1634	182.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0327395_57	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0327395_57	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0327395_57	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
UniRef90	UHGV-0327395_58	UniRef90_A0A098GES5	95.5	1.12e-23	Putative phage associated protein	N/A
structural_annotation	UHGV-0327395_58	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A