UHGV-0329340 (vOTU-091451)

Viral Genome: UHGV-0329340

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0329340
vOTU ID	vOTU-091451
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR9040412_141_25021_round8-12~2986603
Associated BioSample	SAMN11391648
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.95 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9813
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.2
Jumbo phage	No

Genome content
Genome length (bp)	24,345
GC content	36.78%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	98%
Average CDS length (bps)	683.66
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0329340_1	UniRef90_A0A090I0A8	119.0	1.28e-33	Putative membrane protein	N/A
eggNOG-mapper	UHGV-0329340_1	1033744.CAEL01000029_gene1265	68.2	0.0000000000000406	N/A	N/A
UniRef90	UHGV-0329340_2	UniRef90_F0H2C5	108.0	3.14e-29	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0329340_2	1118057.CAGX01000020_gene1589	113.0	8.75e-32	N/A	N/A
KOfam	UHGV-0329340_3	K02395	100.5	2.7e-29	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0329340_3	phrog_12727	176.5	0	endolysin	lysis
UniRef90	UHGV-0329340_3	UniRef90_A0A379C7S1	623.0	0	Exo-glucosaminidase lytG	N/A
eggNOG-mapper	UHGV-0329340_3	1118057.CAGX01000058_gene63	627.0	0	mannosyl-glycoprotein	N/A
Pfam	UHGV-0329340_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0329340_3	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0329340_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0329340_3	PF01520,PF01832,MF_00562,TIGR02883,NF009355,COG0860,COG1705	N/A	N/A	N/A	N/A
UniRef90	UHGV-0329340_5	UniRef90_A0A6B4ZPH6	66.6	0.00000000000011	XkdX family protein	N/A
eggNOG-mapper	UHGV-0329340_5	1084719.G3MAH0_9CAUD	61.6	0.0000000000016	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0329340_5	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0329340_5	PF09693	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0329340_6	1211817.CCAT010000039_gene120	85.5	4.06e-18	N/A	N/A
PHROG	UHGV-0329340_7	phrog_16120	112.1	5.3e-33	virion structural protein	head and packaging
UniRef90	UHGV-0329340_7	UniRef90_UPI001F2AE87C	191.0	0	head completion/stabilization protein	N/A
eggNOG-mapper	UHGV-0329340_7	938288.HG326226_gene876	184.0	0	N/A	N/A
PHROG	UHGV-0329340_9	phrog_18608	83.0	4.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0329340_9	768710.DesyoDRAFT_1133	91.3	1.47e-16	tail collar domain protein	N/A
Pfam	UHGV-0329340_9	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0329340_9	PF20072	N/A	N/A	N/A	DUF6468
COG	UHGV-0329340_9	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0329340_11	phrog_26795	223.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0329340_11	1382315.JPOI01000001_gene271	299.0	0	N/A	N/A
structural_annotation	UHGV-0329340_11	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_12	phrog_10519	48.4	1.8e-21	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0329340_12	1195236.CTER_5103	138.0	2.11e-31	N/A	N/A
PHROG	UHGV-0329340_13	phrog_1535	108.2	9.8e-34	tail length tape measure protein	tail
UniRef90	UHGV-0329340_13	UniRef90_UPI00189F1273	175.0	1.90577e-43	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0329340_13	696281.Desru_3541	219.0	0	Phage tail tape measure protein, TP901 family	N/A
NCBIFam	UHGV-0329340_13	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0329340_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0329340_15	phrog_88	109.4	2.8e-32	major tail protein	tail
UniRef90	UHGV-0329340_15	UniRef90_A0A2H4JGI1	80.9	0.00000000000000164	Putative major tail protein	N/A
eggNOG-mapper	UHGV-0329340_15	1460635.JCM19038_2812	69.7	0.00000000000412	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0329340_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0329340_15	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_16	phrog_78	43.4	0.0000000000061	tail terminator	connector
structural_annotation	UHGV-0329340_16	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0329340_17	UniRef90_G9XA49	77.8	9.26e-16	HK97 gp10 family phage protein	N/A
UniRef90	UHGV-0329340_18	UniRef90_A0A7C6SIU7	81.6	1.27e-17	Phage head closure protein	N/A
Pfam	UHGV-0329340_18	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0329340_18	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0329340_18	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
PHROG	UHGV-0329340_19	phrog_749	55.8	7e-16	N/A	unknown function
UniRef90	UHGV-0329340_19	UniRef90_A0A396SIZ8	50.4	0.00000551	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0329340_19	926561.KB900622_gene644	57.8	0.0000000011	N/A	N/A
structural_annotation	UHGV-0329340_19	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_21	phrog_10	126.8	2.1e-37	major head protein	head and packaging
UniRef90	UHGV-0329340_21	UniRef90_A0A371IJQ6	418.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0329340_21	936140.AEOT01000014_gene1357	366.0	0	Phage capsid family	N/A
Pfam	UHGV-0329340_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0329340_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0329340_21	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0329340_21	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0329340_22	K01358	128.9	5.3e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0329340_22	phrog_94	214.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0329340_22	UniRef90_A0A371IJS3	260.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0329340_22	1408823.AXUS01000025_gene2622	133.0	4.14e-36	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0329340_22	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0329340_22	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0329340_22	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_23	phrog_12	138.9	2.79993e-41	portal protein	head and packaging
UniRef90	UHGV-0329340_23	UniRef90_A0A371IJQ1	364.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0329340_23	926561.KB900623_gene767	324.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0329340_23	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0329340_23	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0329340_23	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0329340_23	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_24	phrog_9	257.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0329340_24	UniRef90_A0A371IJP9	679.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0329340_24	864178.E2ELI2_9CAUD	451.0	0	Phage Terminase	N/A
Pfam	UHGV-0329340_24	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0329340_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-0329340_24	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_25	phrog_5110	112.0	2.1e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0329340_25	UniRef90_A0A371IJQ7	123.0	7.73e-34	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0329340_25	1220589.CD32_01745	109.0	1.81e-28	Phage terminase, small subunit	N/A
Pfam	UHGV-0329340_25	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0329340_25	COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-0329340_26	K07451	40.4	0.000000000051	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0329340_26	phrog_119	80.3	2.7e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329340_26	UniRef90_A0A371IJS9	114.0	4.83e-31	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0329340_26	926561.KB900623_gene763	94.0	1.72e-23	HNH nucleases	N/A
Pfam	UHGV-0329340_26	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0329340_26	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0329340_27	phrog_36	86.0	4.6e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-0329340_27	UniRef90_UPI00137B3314	84.0	4.42e-18	N/A	N/A
eggNOG-mapper	UHGV-0329340_27	796940.HMPREF9628_00155	86.3	8.84e-20	N/A	N/A
Pfam	UHGV-0329340_27	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0329340_27	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_28	phrog_5702	61.9	5.9e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329340_28	UniRef90_A0A133PK84	137.0	1.23e-39	VRR-NUC domain protein	N/A
eggNOG-mapper	UHGV-0329340_28	1033744.CAEL01000029_gene1290	90.1	1.29e-21	VRR-NUC domain	N/A
Pfam	UHGV-0329340_28	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0329340_28	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0329340_29	K02315	109.0	5.8e-32	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0329340_29	phrog_50	96.0	4.8e-28	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329340_29	UniRef90_A0A848RG34	184.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0329340_29	1118057.CAGX01000020_gene1651	162.0	0	N/A	N/A
COG	UHGV-0329340_29	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0329340_29	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0329340_30	phrog_2514	112.3	4.3e-33	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329340_30	UniRef90_A0A383TF68	224.0	0	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0329340_30	1158602.I590_00669	185.0	0	Replication initiation and membrane attachment	N/A
Pfam	UHGV-0329340_30	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
COG	UHGV-0329340_30	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0329340_30	PF07106,TIGR01610,COG3682	N/A	N/A	N/A	N/A
KOfam	UHGV-0329340_31	K06167	64.8	1.2e-18	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0329340_31	phrog_392	232.6	0	metal-dependent hydrolase	other
UniRef90	UHGV-0329340_31	UniRef90_U7UFW5	402.0	0	Beta-lactamase family protein	N/A
eggNOG-mapper	UHGV-0329340_31	1111134.HMPREF1253_0394	402.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0329340_31	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-0329340_31	APIS076	N/A	N/A	N/A	N/A
COG	UHGV-0329340_31	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0329340_31	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-0329340_33	K07455	209.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0329340_33	phrog_148	225.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329340_33	UniRef90_U7UH07	463.0	0	Recombinase, phage RecT family	N/A
eggNOG-mapper	UHGV-0329340_33	1111134.HMPREF1253_0395	463.0	0	RecT family	N/A
Pfam	UHGV-0329340_33	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0329340_33	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0329340_33	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0329340_33	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0329340_34	K03111	127.8	1.3e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0329340_34	phrog_44	134.1	9.5e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329340_34	UniRef90_A0A133PK87	187.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0329340_34	1111134.HMPREF1253_0399	185.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0329340_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0329340_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0329340_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0329340_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0329340_34	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A