UHGV-0329578 (vOTU-000181)

Viral Genome: UHGV-0329578

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0329578
vOTU ID	vOTU-000181
Representative Genome?	Yes
Source	mMGE
Original genome ID	ERR2855903_141_124894_round1256~2710878
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.02
Jumbo phage	No

Genome content
Genome length (bp)	29,751
GC content	61.33%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	47
CDS density	93%
Average CDS length (bps)	591.57
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0329578_1	phrog_253	101.4	9.5e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_1	UniRef90_UPI000D2FBDEF	74.7	0.0000000000000158	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0329578_1	686340.Metal_4000	67.0	0.00000000000306	PFAM Siphovirus Gp157	N/A
Pfam	UHGV-0329578_1	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
PHROG	UHGV-0329578_2	phrog_8489	138.7	2.4e-41	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_2	UniRef90_UPI0013778123	180.0	0	replisome organizer	N/A
eggNOG-mapper	UHGV-0329578_2	1139219.I569_01402	161.0	0	DnaD domain protein	N/A
COG	UHGV-0329578_2	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0329578_2	PF09681,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0329578_3	K02315	140.0	1.99993e-41	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0329578_3	phrog_50	122.7	2.9e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_3	UniRef90_UPI00110588D4	201.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0329578_3	1280694.AUJQ01000001_gene1885	147.0	3.9e-40	N/A	N/A
Pfam	UHGV-0329578_3	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0329578_3	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0329578_3	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-0329578_4	K22299	42.0	0.000000000019	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0329578_4	phrog_8	43.2	0.0000000000083	transcriptional regulator	transcription regulation
Pfam	UHGV-0329578_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0329578_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0329578_7	phrog_28142	179.0	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0329578_7	1111121.HMPREF1247_0042	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-0329578_11	1499680.CCFE01000010_gene102	89.7	1.61e-20	N/A	N/A
PHROG	UHGV-0329578_13	phrog_1569	182.5	0	N/A	unknown function
UniRef90	UHGV-0329578_13	UniRef90_G9RPW0	355.0	0	S-AdoMet_synt_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0329578_13	665956.HMPREF1032_02279	355.0	0	S-adenosylmethionine synthetase, N-terminal domain	N/A
Pfam	UHGV-0329578_13	PF00438	N/A	N/A	S-adenosylmethionine synthetase, N-terminal domain	S-AdoMet_synt_N
COG	UHGV-0329578_13	COG0192	N/A	N/A	S-adenosylmethionine synthetase	N/A
structural_annotation	UHGV-0329578_13	PF01941,MF_00086,TIGR01034,COG0192	N/A	N/A	N/A	N/A
KOfam	UHGV-0329578_14	K01520	166.6	0	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0329578_14	phrog_135	149.6	1.26117e-44	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_14	UniRef90_UPI0009316224	182.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0329578_14	445975.COLSTE_02170	167.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-0329578_14	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0329578_14	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0329578_14	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0329578_14	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0329578_16	1236514.BAKL01000015_gene1640	53.9	0.000000571	N/A	N/A
PHROG	UHGV-0329578_17	phrog_309	143.5	7.80523e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0329578_17	UniRef90_A0A3N0WK81	116.0	4.2e-30	Terminase	N/A
eggNOG-mapper	UHGV-0329578_17	992406.RIA_0201	115.0	1.3e-30	transposase activity	N/A
COG	UHGV-0329578_17	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0329578_17	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0329578_18	K06909	108.4	8.5e-32	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0329578_18	phrog_2	118.9	6.9e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0329578_18	UniRef90_A0A3F2ZSA2	368.0	0	Phage terminase, large subunit, pbsx family	N/A
eggNOG-mapper	UHGV-0329578_18	246199.CUS_7600	355.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0329578_18	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0329578_18	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0329578_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0329578_18	PF04466,PF20441,MF_04148,TIGR01547,TIGR01445,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_19	phrog_15471	149.3	8.40779e-45	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_19	UniRef90_A0A1S1V9J8	189.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0329578_19	1141106.CAIB01000133_gene1117	135.0	4e-37	HNH endonuclease	N/A
Pfam	UHGV-0329578_19	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0329578_19	PF13392,PF10013,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_20	phrog_533	101.9	4.5e-30	portal protein	head and packaging
UniRef90	UHGV-0329578_20	UniRef90_A0A345MKB8	475.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0329578_20	536233.CLO_0882	75.9	0.00000000000723	N/A	N/A
structural_annotation	UHGV-0329578_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_21	phrog_581	114.9	6.5e-34	minor head protein	head and packaging
UniRef90	UHGV-0329578_21	UniRef90_A0A345MKC2	251.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0329578_21	665956.HMPREF1032_02954	97.8	2.68e-19	N/A	N/A
Pfam	UHGV-0329578_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0329578_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0329578_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_24	phrog_267	185.2	0	major head protein	head and packaging
UniRef90	UHGV-0329578_24	UniRef90_A0A7X7VRL6	372.0	0	P22 coat protein - protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0329578_24	1504823.CCMM01000008_gene1041	239.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0329578_24	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_25	phrog_892	55.8	7.1e-16	tail fiber protein	tail
PHROG	UHGV-0329578_26	phrog_541	61.7	1.2e-17	head-tail adaptor	connector
UniRef90	UHGV-0329578_26	UniRef90_A0A345MKD1	70.5	0.000000000000383	Putative head-tail connector protein	N/A
PHROG	UHGV-0329578_27	phrog_3366	42.5	0.00000000001	N/A	unknown function
structural_annotation	UHGV-0329578_27	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_28	phrog_556	54.7	0.0000000000000018	minor head protein	head and packaging
UniRef90	UHGV-0329578_28	UniRef90_A0A542AIW0	52.8	0.0000021	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0329578_28	764299.STRIC_2533	52.0	0.000000541	Minor capsid protein	N/A
Pfam	UHGV-0329578_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0329578_28	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_29	phrog_3266	53.5	0.0000000000000034	tail completion	connector
structural_annotation	UHGV-0329578_29	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_30	phrog_3099	43.1	0.0000000000077	N/A	unknown function
eggNOG-mapper	UHGV-0329578_30	1125725.HMPREF1325_1337	53.5	0.00000133	N/A	N/A
structural_annotation	UHGV-0329578_30	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_32	phrog_706	109.9	1.4e-33	N/A	unknown function
UniRef90	UHGV-0329578_32	UniRef90_UPI00195660EF	71.6	0.00000000000327	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0329578_32	1540257.JQMW01000013_gene734	75.1	0.0000000000000292	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0329578_32	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0329578_32	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_33	phrog_23464	125.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0329578_33	665950.HMPREF1025_02660	147.0	7.65e-34	phage tail tape measure protein	N/A
COG	UHGV-0329578_33	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0329578_33	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_34	phrog_33	62.1	1.3e-17	distal tail protein Dit	tail
UniRef90	UHGV-0329578_34	UniRef90_A0A1C5VV34	197.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0329578_34	1321782.HMPREF1986_02277	132.0	6.4e-34	PFAM Phage tail protein	N/A
COG	UHGV-0329578_34	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0329578_34	PF16774,PF21766,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_35	phrog_538	111.3	9e-33	minor tail protein	tail
UniRef90	UHGV-0329578_35	UniRef90_A0A8J6IQQ3	217.0	0	Siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0329578_35	1507.HMPREF0262_01273	102.0	7.62e-22	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0329578_35	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0329578_35	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_36	phrog_1220	172.1	0	head protein	head and packaging
eggNOG-mapper	UHGV-0329578_36	1033738.CAEP01000018_gene3685	117.0	1.01e-26	N/A	N/A
structural_annotation	UHGV-0329578_36	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_38	phrog_937	43.8	0.0000000000031	hemolysin	other
PHROG	UHGV-0329578_39	phrog_1129	60.8	1.7e-17	holin	lysis
UniRef90	UHGV-0329578_39	UniRef90_UPI00189EBD01	54.3	0.000000112	phage holin family protein	N/A
eggNOG-mapper	UHGV-0329578_39	1414720.CBYM010000001_gene714	53.1	0.0000000544	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0329578_39	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0329578_39	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0329578_40	UniRef90_A0A1Y4G4Q3	271.0	0	Peptidase_C39_2 domain-containing protein	N/A
Pfam	UHGV-0329578_40	PF12385	N/A	N/A	Papain-like cysteine protease AvrRpt2	Peptidase_C70
COG	UHGV-0329578_40	COG0768	N/A	N/A	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	N/A
structural_annotation	UHGV-0329578_40	PF03412,NF033920,COG4990	N/A	N/A	N/A	N/A
KOfam	UHGV-0329578_41	K07273	175.0	0	acm; lysozyme	N/A
PHROG	UHGV-0329578_41	phrog_291	197.2	0	endolysin	lysis
UniRef90	UHGV-0329578_41	UniRef90_A0A1Y4G585	358.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0329578_41	445975.COLSTE_02142	343.0	0	CW_7 repeat	N/A
Pfam	UHGV-0329578_41	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0329578_41	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0329578_41	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0329578_41	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0329578_42	phrog_155	112.9	2.7e-33	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_42	UniRef90_A0A6G5R068	115.0	3.86e-28	DNA single-strand annealing protein, ERF superfamily	N/A
eggNOG-mapper	UHGV-0329578_42	413066.A1EAD0_9CAUD	109.0	3.92e-26	ERF superfamily	N/A
Pfam	UHGV-0329578_42	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0329578_42	PF04404,TIGR00607,COG5468	N/A	N/A	N/A	N/A
KOfam	UHGV-0329578_43	K03111	121.9	8.6e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0329578_43	phrog_44	128.7	4.3e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_43	UniRef90_F0HRD3	149.0	1.17709e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0329578_43	445975.COLSTE_01126	143.0	8.13033e-42	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0329578_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0329578_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0329578_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0329578_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0329578_43	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0329578_46	K01160	57.0	5.5e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0329578_46	phrog_140	89.4	4.6e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0329578_46	UniRef90_A0A8D5ZQ74	102.0	7e-25	Endonuclease	N/A
eggNOG-mapper	UHGV-0329578_46	1504822.CCNO01000013_gene309	82.4	7.91e-18	crossover junction endodeoxyribonuclease activity	N/A
Pfam	UHGV-0329578_46	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0329578_46	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0329578_46	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A