UHGV-0330617 (vOTU-019517)

Viral Genome: UHGV-0330617

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0330617
vOTU ID	vOTU-019517
Representative Genome?	Yes
Source	mMGE
Original genome ID	SRR5106275_141_43782_round347~4789970
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	75.26 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9814
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.26
Jumbo phage	No

Genome content
Genome length (bp)	42,819
GC content	36.40%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	68
CDS density	93%
Average CDS length (bps)	582.57
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 75.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0330617_1	phrog_22444	81.0	1.6e-23	N/A	unknown function
UniRef90	UHGV-0330617_1	UniRef90_A0A5S3QIX1	149.0	1.87e-38	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0330617_1	1121422.AUMW01000042_gene1260	159.0	5.05869e-43	DnaD domain protein	N/A
COG	UHGV-0330617_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0330617_1	PF05584,NF000243,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_2	phrog_14314	45.5	0.0000000000016	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0330617_2	UniRef90_A0A8D9PGN5	337.0	0	HNH endonuclease	N/A
Pfam	UHGV-0330617_2	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0330617_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0330617_2	PF01844	N/A	N/A	N/A	N/A
UniRef90	UHGV-0330617_3	UniRef90_A0A8D9PGW1	126.0	4.8e-37	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-0330617_3	PF05225,COG2886	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0330617_4	PF04466	N/A	N/A	N/A	N/A
UniRef90	UHGV-0330617_5	UniRef90_A0A8D9PGN8	51.6	0.00000126	Acetyl-coA carboxylase zinc finger domain protein	N/A
PHROG	UHGV-0330617_10	phrog_38	164.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0330617_10	UniRef90_A0A8D9UIV2	659.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0330617_10	397290.C810_01390	809.0	0	chromosome segregation	N/A
COG	UHGV-0330617_10	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0330617_10	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_11	phrog_36	68.2	1.5e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0330617_11	397290.C810_01391	182.0	0	N/A	N/A
structural_annotation	UHGV-0330617_11	PF02996	N/A	N/A	N/A	N/A
UniRef90	UHGV-0330617_12	UniRef90_A0A8D9UIR9	154.0	0	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-0330617_13	phrog_64	137.9	4.99997e-41	portal protein	head and packaging
UniRef90	UHGV-0330617_13	UniRef90_A0A8D9PG58	1050.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0330617_13	397290.C810_01397	459.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0330617_13	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0330617_13	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_15	phrog_544	276.5	0	major head protein	head and packaging
UniRef90	UHGV-0330617_15	UniRef90_A0A8D9PGL1	641.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0330617_15	608534.GCWU000341_02293	328.0	0	N/A	N/A
NCBIFam	UHGV-0330617_15	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0330617_15	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0330617_16	UniRef90_A0A8D9UIY7	174.0	0	Rho termination factor	N/A
structural_annotation	UHGV-0330617_16	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0330617_17	397290.C810_01402	73.6	0.00000000000000312	N/A	N/A
PHROG	UHGV-0330617_18	phrog_1863	55.0	6.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0330617_18	1232452.BAIB02000007_gene1606	62.8	0.000000000036	N/A	N/A
PHROG	UHGV-0330617_19	phrog_1129	75.3	5.2e-22	holin	lysis
UniRef90	UHGV-0330617_19	UniRef90_A0A8D9UII9	164.0	0	Holin	N/A
eggNOG-mapper	UHGV-0330617_19	411461.DORFOR_00721	107.0	1.97e-29	N/A	N/A
Pfam	UHGV-0330617_19	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0330617_19	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0330617_20	1298920.KI911353_gene2656	61.2	0.000000000747	N/A	N/A
structural_annotation	UHGV-0330617_20	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0330617_21	1298920.KI911353_gene2654	183.0	0	N/A	N/A
AcrCatalog	UHGV-0330617_21	cluster_24841	86.7	2.18e-23	NA	N/A
structural_annotation	UHGV-0330617_22	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0330617_23	1298920.KI911353_gene2652	65.5	0.0000000000372	N/A	N/A
structural_annotation	UHGV-0330617_23	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_24	phrog_36112	68.6	6.7e-20	N/A	unknown function
UniRef90	UHGV-0330617_24	UniRef90_A0A8D9PG71	305.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-0330617_24	1298920.KI911353_gene2651	117.0	4.42e-31	N/A	N/A
structural_annotation	UHGV-0330617_24	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_26	phrog_28918	75.8	3.5e-22	N/A	unknown function
UniRef90	UHGV-0330617_26	UniRef90_A0A8D9PGP0	704.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-0330617_26	1298920.KI911353_gene2649	166.0	1.60995e-41	tape measure	N/A
COG	UHGV-0330617_26	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0330617_26	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_27	phrog_1204	106.9	0	tail protein	tail
eggNOG-mapper	UHGV-0330617_27	397290.C810_01419	227.0	0	Transglycosylase SLT domain	N/A
COG	UHGV-0330617_27	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0330617_27	PF20155,PF06456,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0330617_30	UniRef90_A0A8D9UIC9	108.0	7.37e-30	Alginate and motility regulator	N/A
eggNOG-mapper	UHGV-0330617_30	476272.RUMHYD_01983	70.9	7.34e-16	N/A	N/A
Pfam	UHGV-0330617_30	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0330617_30	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0330617_31	PF07875	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_32	phrog_130	99.2	4.6e-29	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0330617_32	UniRef90_A0A8D9PG17	387.0	0	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-0330617_32	658655.HMPREF0988_00912	242.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0330617_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0330617_32	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0330617_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0330617_32	PF03374,PF02498,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_35	phrog_1194	66.5	3.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0330617_35	1232453.BAIF02000058_gene1638	66.2	0.00000000000271	N/A	N/A
structural_annotation	UHGV-0330617_35	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0330617_36	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_37	phrog_6616	150.5	9.80909e-45	tail protein	tail
UniRef90	UHGV-0330617_37	UniRef90_A0A8D9PGP3	918.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0330617_37	1294142.CINTURNW_1706	271.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0330617_37	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0330617_37	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0330617_37	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0330617_39	K07273	143.3	2.20004e-42	acm; lysozyme	N/A
PHROG	UHGV-0330617_39	phrog_6745	96.8	2.3e-28	endolysin	lysis
UniRef90	UHGV-0330617_39	UniRef90_A0A7U9R8E5	219.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0330617_39	1235800.C819_00458	219.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0330617_39	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0330617_39	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0330617_39	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-0330617_40	K22300	47.9	0.00000000000028	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0330617_40	phrog_2967	49.5	0.000000000000073	transcriptional regulator	transcription regulation
UniRef90	UHGV-0330617_40	UniRef90_UPI001D029144	191.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0330617_40	457412.RSAG_00795	118.0	2.72e-32	sequence-specific DNA binding	N/A
COG	UHGV-0330617_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0330617_40	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0330617_41	UniRef90_UPI001D0090A6	137.0	7.94004e-41	N/A	N/A
eggNOG-mapper	UHGV-0330617_41	411470.RUMGNA_03231	98.6	2.54e-26	N/A	N/A
Pfam	UHGV-0330617_41	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0330617_41	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0330617_41	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_42	phrog_463	183.6	0	anti-repressor	transcription regulation
UniRef90	UHGV-0330617_42	UniRef90_A0A3D5LQU6	279.0	0	Toxin Bro	N/A
eggNOG-mapper	UHGV-0330617_42	411490.ANACAC_00813	186.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0330617_42	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0330617_42	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0330617_42	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0330617_42	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0330617_44	1304866.K413DRAFT_3008	51.2	0.00000269	Phage regulatory protein	N/A
COG	UHGV-0330617_44	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0330617_44	PF10552	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_47	phrog_26861	127.3	7.3e-38	N/A	unknown function
UniRef90	UHGV-0330617_47	UniRef90_A0A8D9PGK1	233.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-0330617_47	515620.EUBELI_01590	228.0	0	N/A	N/A
Pfam	UHGV-0330617_47	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0330617_47	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0330617_47	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0330617_47	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0330617_49	K19171	113.3	2.2e-33	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0330617_49	phrog_77	184.7	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0330617_49	UniRef90_R7BHE4	900.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0330617_49	1298920.KI911353_gene2731	295.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0330617_49	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0330617_49	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0330617_49	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_51	phrog_4433	92.3	6.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0330617_51	886882.PPSC2_p0363	102.0	8e-23	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0330617_51	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0330617_51	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_52	phrog_2185	301.2	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0330617_52	UniRef90_UPI001BC46C39	483.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0330617_52	658655.HMPREF0988_00886	377.0	0	N/A	N/A
Pfam	UHGV-0330617_52	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0330617_52	NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_53	phrog_25456	96.3	1.6e-28	N/A	unknown function
KOfam	UHGV-0330617_55	K06167	43.2	0.0000000000045	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0330617_55	phrog_392	166.9	0	metal-dependent hydrolase	other
UniRef90	UHGV-0330617_55	UniRef90_UPI001BC4CEB0	334.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0330617_55	1122985.HMPREF1991_02241	146.0	1.82001e-40	N/A	N/A
Pfam	UHGV-0330617_55	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
dbAPIS	UHGV-0330617_55	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-0330617_55	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0330617_55	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_56	phrog_31463	96.2	3.9e-28	N/A	unknown function
UniRef90	UHGV-0330617_56	UniRef90_UPI001160B515	112.0	9.93e-29	LemA family protein	N/A
eggNOG-mapper	UHGV-0330617_57	397290.C810_01492	58.5	0.00000000812	N/A	N/A
COG	UHGV-0330617_59	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0330617_60	phrog_10714	40.0	0.000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0330617_60	397290.C810_05186	77.4	8.19e-17	N/A	N/A
PHROG	UHGV-0330617_61	phrog_20593	48.3	0.00000000000016	N/A	unknown function
structural_annotation	UHGV-0330617_62	PF01396	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_63	phrog_98	73.6	3e-21	N/A	unknown function
UniRef90	UHGV-0330617_63	UniRef90_A0A3E4YM29	137.0	1.38e-39	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0330617_63	742723.HMPREF9477_00921	70.1	0.000000000000194	YopX protein	N/A
Pfam	UHGV-0330617_63	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0330617_63	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0330617_63	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-0330617_64	K03111	119.6	4.3e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0330617_64	phrog_44	127.1	1.4e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0330617_64	UniRef90_A0A412RR48	270.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0330617_64	397290.C810_01495	194.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0330617_64	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0330617_64	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0330617_64	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0330617_64	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0330617_64	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0330617_66	phrog_19106	277.8	0	N/A	unknown function
UniRef90	UHGV-0330617_66	UniRef90_A0A412RQV5	358.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0330617_66	658655.HMPREF0988_00875	219.0	0	N/A	N/A
structural_annotation	UHGV-0330617_66	TIGR01453	N/A	N/A	N/A	N/A
COG	UHGV-0330617_68	COG0863	N/A	N/A	DNA modification methylase	N/A